Protein–RNA interactions for Protein: Q9C0D0

PHACTR1, Phosphatase and actin regulator 1, humanhuman

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHACTR1Q9C0D0 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
PHACTR1Q9C0D0 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PHACTR1Q9C0D0 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PHACTR1Q9C0D0 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC18.51■□□□□ 0.55
PHACTR1Q9C0D0 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PHACTR1Q9C0D0 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PHACTR1Q9C0D0 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
PHACTR1Q9C0D0 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC18.51■□□□□ 0.55
PHACTR1Q9C0D0 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
PHACTR1Q9C0D0 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PHACTR1Q9C0D0 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
PHACTR1Q9C0D0 FAM197Y1-201ENST00000421178 764 ntBASIC18.51■□□□□ 0.55
PHACTR1Q9C0D0 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
PHACTR1Q9C0D0 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.51■□□□□ 0.55
PHACTR1Q9C0D0 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC18.51■□□□□ 0.55
PHACTR1Q9C0D0 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PHACTR1Q9C0D0 SLC25A1P4-201ENST00000567977 778 ntBASIC18.51■□□□□ 0.55
PHACTR1Q9C0D0 SPATA18-202ENST00000419395 2816 ntTSL 2 BASIC18.51■□□□□ 0.55
PHACTR1Q9C0D0 PARD3-205ENST00000374773 3420 ntTSL 5 BASIC18.51■□□□□ 0.55
PHACTR1Q9C0D0 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PHACTR1Q9C0D0 RWDD4-202ENST00000327570 2590 ntAPPRIS ALT1 TSL 3 BASIC18.51■□□□□ 0.55
PHACTR1Q9C0D0 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PHACTR1Q9C0D0 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
PHACTR1Q9C0D0 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.51■□□□□ 0.55
PHACTR1Q9C0D0 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
PHACTR1Q9C0D0 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
PHACTR1Q9C0D0 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC18.51■□□□□ 0.55
PHACTR1Q9C0D0 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
PHACTR1Q9C0D0 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC18.51■□□□□ 0.55
PHACTR1Q9C0D0 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC18.5■□□□□ 0.55
PHACTR1Q9C0D0 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PHACTR1Q9C0D0 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PHACTR1Q9C0D0 AEBP1-206ENST00000450684 2571 ntTSL 2 BASIC18.5■□□□□ 0.55
PHACTR1Q9C0D0 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PHACTR1Q9C0D0 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
PHACTR1Q9C0D0 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PHACTR1Q9C0D0 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
PHACTR1Q9C0D0 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC18.5■□□□□ 0.55
PHACTR1Q9C0D0 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
PHACTR1Q9C0D0 KRT18P29-201ENST00000397031 1267 ntBASIC18.5■□□□□ 0.55
PHACTR1Q9C0D0 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PHACTR1Q9C0D0 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC18.5■□□□□ 0.55
PHACTR1Q9C0D0 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.5■□□□□ 0.55
PHACTR1Q9C0D0 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC18.5■□□□□ 0.55
PHACTR1Q9C0D0 TK2-204ENST00000525974 1178 ntTSL 2 BASIC18.5■□□□□ 0.55
PHACTR1Q9C0D0 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC18.5■□□□□ 0.55
PHACTR1Q9C0D0 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.5■□□□□ 0.55
PHACTR1Q9C0D0 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.5■□□□□ 0.55
PHACTR1Q9C0D0 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC18.5■□□□□ 0.55
PHACTR1Q9C0D0 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC18.5■□□□□ 0.55
PHACTR1Q9C0D0 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PHACTR1Q9C0D0 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PHACTR1Q9C0D0 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.5■□□□□ 0.55
PHACTR1Q9C0D0 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.5■□□□□ 0.55
PHACTR1Q9C0D0 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC18.5■□□□□ 0.55
PHACTR1Q9C0D0 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
PHACTR1Q9C0D0 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
PHACTR1Q9C0D0 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PHACTR1Q9C0D0 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PHACTR1Q9C0D0 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
PHACTR1Q9C0D0 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
PHACTR1Q9C0D0 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
PHACTR1Q9C0D0 RGS3-211ENST00000462403 2155 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PHACTR1Q9C0D0 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PHACTR1Q9C0D0 LINC01126-201ENST00000623515 1646 ntBASIC18.49■□□□□ 0.55
PHACTR1Q9C0D0 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PHACTR1Q9C0D0 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PHACTR1Q9C0D0 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PHACTR1Q9C0D0 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
PHACTR1Q9C0D0 CHUK-201ENST00000370397 3625 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PHACTR1Q9C0D0 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
PHACTR1Q9C0D0 KRT18P23-201ENST00000435622 1283 ntBASIC18.49■□□□□ 0.55
PHACTR1Q9C0D0 AC097488.1-201ENST00000507834 756 ntBASIC18.49■□□□□ 0.55
PHACTR1Q9C0D0 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC18.49■□□□□ 0.55
PHACTR1Q9C0D0 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC18.49■□□□□ 0.55
PHACTR1Q9C0D0 GRAP-204ENST00000573099 846 ntTSL 3 BASIC18.49■□□□□ 0.55
PHACTR1Q9C0D0 AP005242.2-201ENST00000580065 1175 ntBASIC18.49■□□□□ 0.55
PHACTR1Q9C0D0 ITM2C-210ENST00000620962 501 ntBASIC18.49■□□□□ 0.55
PHACTR1Q9C0D0 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.49■□□□□ 0.55
PHACTR1Q9C0D0 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC18.49■□□□□ 0.55
PHACTR1Q9C0D0 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC18.49■□□□□ 0.55
PHACTR1Q9C0D0 ARHGAP22-206ENST00000435790 2595 ntAPPRIS ALT2 TSL 2 BASIC18.49■□□□□ 0.55
PHACTR1Q9C0D0 AC012313.1-201ENST00000593393 3059 ntBASIC18.49■□□□□ 0.55
PHACTR1Q9C0D0 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC18.49■□□□□ 0.55
PHACTR1Q9C0D0 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC18.49■□□□□ 0.55
PHACTR1Q9C0D0 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
PHACTR1Q9C0D0 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.49■□□□□ 0.55
PHACTR1Q9C0D0 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
PHACTR1Q9C0D0 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.48■□□□□ 0.55
PHACTR1Q9C0D0 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.48■□□□□ 0.55
PHACTR1Q9C0D0 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.48■□□□□ 0.55
PHACTR1Q9C0D0 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PHACTR1Q9C0D0 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC18.48■□□□□ 0.55
PHACTR1Q9C0D0 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.48■□□□□ 0.55
PHACTR1Q9C0D0 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC18.48■□□□□ 0.55
PHACTR1Q9C0D0 AL024508.2-201ENST00000607749 1894 ntBASIC18.48■□□□□ 0.55
PHACTR1Q9C0D0 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
PHACTR1Q9C0D0 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC18.48■□□□□ 0.55
PHACTR1Q9C0D0 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
PHACTR1Q9C0D0 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 24.1 ms