Protein–RNA interactions for Protein: Q8WZA2

RAPGEF4, Rap guanine nucleotide exchange factor 4, humanhuman

Predictions only

Length 1,011 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4Q8WZA2 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
RAPGEF4Q8WZA2 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC23.87■■□□□ 1.41
RAPGEF4Q8WZA2 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
RAPGEF4Q8WZA2 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
RAPGEF4Q8WZA2 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC23.86■■□□□ 1.41
RAPGEF4Q8WZA2 SAMD11-211ENST00000616125 2230 ntAPPRIS ALT2 TSL 5 BASIC23.86■■□□□ 1.41
RAPGEF4Q8WZA2 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC23.86■■□□□ 1.41
RAPGEF4Q8WZA2 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC23.86■■□□□ 1.41
RAPGEF4Q8WZA2 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC23.86■■□□□ 1.41
RAPGEF4Q8WZA2 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC23.86■■□□□ 1.41
RAPGEF4Q8WZA2 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC23.86■■□□□ 1.41
RAPGEF4Q8WZA2 MPIG6B-210ENST00000480039 790 ntAPPRIS ALT2 TSL 1 (best) BASIC23.86■■□□□ 1.41
RAPGEF4Q8WZA2 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC23.86■■□□□ 1.41
RAPGEF4Q8WZA2 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC23.86■■□□□ 1.41
RAPGEF4Q8WZA2 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC23.86■■□□□ 1.41
RAPGEF4Q8WZA2 ECSIT-207ENST00000588998 818 ntTSL 3 BASIC23.86■■□□□ 1.41
RAPGEF4Q8WZA2 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC23.86■■□□□ 1.41
RAPGEF4Q8WZA2 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC23.86■■□□□ 1.41
RAPGEF4Q8WZA2 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RAPGEF4Q8WZA2 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
RAPGEF4Q8WZA2 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC23.85■■□□□ 1.41
RAPGEF4Q8WZA2 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RAPGEF4Q8WZA2 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
RAPGEF4Q8WZA2 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC23.85■■□□□ 1.41
RAPGEF4Q8WZA2 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RAPGEF4Q8WZA2 KANSL1L-203ENST00000418791 3562 ntTSL 1 (best) BASIC23.85■■□□□ 1.41
RAPGEF4Q8WZA2 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC23.85■■□□□ 1.41
RAPGEF4Q8WZA2 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RAPGEF4Q8WZA2 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RAPGEF4Q8WZA2 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC23.85■■□□□ 1.41
RAPGEF4Q8WZA2 MCRIP1-211ENST00000576679 751 ntTSL 2 BASIC23.85■■□□□ 1.41
RAPGEF4Q8WZA2 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC23.85■■□□□ 1.41
RAPGEF4Q8WZA2 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC23.85■■□□□ 1.41
RAPGEF4Q8WZA2 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC23.85■■□□□ 1.41
RAPGEF4Q8WZA2 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RAPGEF4Q8WZA2 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RAPGEF4Q8WZA2 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC23.84■■□□□ 1.41
RAPGEF4Q8WZA2 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC23.84■■□□□ 1.41
RAPGEF4Q8WZA2 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RAPGEF4Q8WZA2 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC23.84■■□□□ 1.41
RAPGEF4Q8WZA2 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC23.84■■□□□ 1.41
RAPGEF4Q8WZA2 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RAPGEF4Q8WZA2 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC23.84■■□□□ 1.41
RAPGEF4Q8WZA2 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC23.84■■□□□ 1.41
RAPGEF4Q8WZA2 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RAPGEF4Q8WZA2 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RAPGEF4Q8WZA2 PAN3-201ENST00000380958 2833 ntAPPRIS P2 TSL 5 BASIC23.84■■□□□ 1.41
RAPGEF4Q8WZA2 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RAPGEF4Q8WZA2 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
RAPGEF4Q8WZA2 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC23.84■■□□□ 1.41
RAPGEF4Q8WZA2 TRIP13-201ENST00000166345 2672 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
RAPGEF4Q8WZA2 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC23.84■■□□□ 1.41
RAPGEF4Q8WZA2 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC23.84■■□□□ 1.41
RAPGEF4Q8WZA2 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
RAPGEF4Q8WZA2 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC23.83■■□□□ 1.41
RAPGEF4Q8WZA2 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC23.83■■□□□ 1.41
RAPGEF4Q8WZA2 TNFSF14-202ENST00000599359 1476 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RAPGEF4Q8WZA2 SYT15-201ENST00000374321 1369 ntAPPRIS P4 TSL 2 BASIC23.83■■□□□ 1.41
RAPGEF4Q8WZA2 SMOX-204ENST00000346595 982 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
RAPGEF4Q8WZA2 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC23.83■■□□□ 1.41
RAPGEF4Q8WZA2 CSF3-203ENST00000394148 622 ntTSL 3 BASIC23.83■■□□□ 1.41
RAPGEF4Q8WZA2 MIR1233-2-201ENST00000408138 82 ntBASIC23.83■■□□□ 1.41
RAPGEF4Q8WZA2 MIR1233-1-201ENST00000408722 82 ntBASIC23.83■■□□□ 1.41
RAPGEF4Q8WZA2 RPS2P1-201ENST00000434010 821 ntBASIC23.83■■□□□ 1.41
RAPGEF4Q8WZA2 AL365226.1-201ENST00000448363 349 ntTSL 2 BASIC23.83■■□□□ 1.41
RAPGEF4Q8WZA2 CMC2-212ENST00000565650 671 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
RAPGEF4Q8WZA2 PSMA6-216ENST00000627895 484 ntTSL 5 BASIC23.83■■□□□ 1.41
RAPGEF4Q8WZA2 EDC4-201ENST00000358933 4800 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RAPGEF4Q8WZA2 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC23.83■■□□□ 1.41
RAPGEF4Q8WZA2 PTGES2-AS1-201ENST00000443493 2100 ntBASIC23.83■■□□□ 1.4
RAPGEF4Q8WZA2 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC23.83■■□□□ 1.4
RAPGEF4Q8WZA2 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC23.83■■□□□ 1.4
RAPGEF4Q8WZA2 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC23.82■■□□□ 1.4
RAPGEF4Q8WZA2 AL356309.3-201ENST00000624132 1934 ntBASIC23.82■■□□□ 1.4
RAPGEF4Q8WZA2 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RAPGEF4Q8WZA2 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC23.82■■□□□ 1.4
RAPGEF4Q8WZA2 PORCN-205ENST00000367574 1368 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RAPGEF4Q8WZA2 PORCN-214ENST00000537758 1371 ntAPPRIS ALT1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RAPGEF4Q8WZA2 PLEKHA8-203ENST00000396259 2840 ntTSL 2 BASIC23.82■■□□□ 1.4
RAPGEF4Q8WZA2 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC23.82■■□□□ 1.4
RAPGEF4Q8WZA2 GAR1-202ENST00000394631 1011 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RAPGEF4Q8WZA2 BX842568.4-201ENST00000421222 227 ntBASIC23.82■■□□□ 1.4
RAPGEF4Q8WZA2 UBXN1-210ENST00000529640 1110 ntAPPRIS ALT1 TSL 5 BASIC23.82■■□□□ 1.4
RAPGEF4Q8WZA2 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC23.82■■□□□ 1.4
RAPGEF4Q8WZA2 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RAPGEF4Q8WZA2 CAND2-206ENST00000626378 333 ntTSL 5 BASIC23.82■■□□□ 1.4
RAPGEF4Q8WZA2 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RAPGEF4Q8WZA2 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RAPGEF4Q8WZA2 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC23.82■■□□□ 1.4
RAPGEF4Q8WZA2 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RAPGEF4Q8WZA2 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC23.81■■□□□ 1.4
RAPGEF4Q8WZA2 SLC25A27-202ENST00000411689 2526 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
RAPGEF4Q8WZA2 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
RAPGEF4Q8WZA2 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
RAPGEF4Q8WZA2 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RAPGEF4Q8WZA2 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC23.81■■□□□ 1.4
RAPGEF4Q8WZA2 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC23.81■■□□□ 1.4
RAPGEF4Q8WZA2 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
RAPGEF4Q8WZA2 COX10-202ENST00000429152 875 ntTSL 2 BASIC23.81■■□□□ 1.4
RAPGEF4Q8WZA2 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC23.81■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 29 ms