Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.55■□□□□ 0.4
CLHC1Q8NHS4 AP005242.2-201ENST00000580065 1175 ntBASIC17.55■□□□□ 0.4
CLHC1Q8NHS4 AP000525.1-201ENST00000608286 694 ntBASIC17.55■□□□□ 0.4
CLHC1Q8NHS4 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CLHC1Q8NHS4 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLHC1Q8NHS4 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.55■□□□□ 0.4
CLHC1Q8NHS4 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLHC1Q8NHS4 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLHC1Q8NHS4 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLHC1Q8NHS4 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.55■□□□□ 0.4
CLHC1Q8NHS4 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLHC1Q8NHS4 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLHC1Q8NHS4 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
CLHC1Q8NHS4 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC17.55■□□□□ 0.4
CLHC1Q8NHS4 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLHC1Q8NHS4 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLHC1Q8NHS4 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
CLHC1Q8NHS4 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
CLHC1Q8NHS4 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
CLHC1Q8NHS4 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLHC1Q8NHS4 B4GALT2-202ENST00000356836 2629 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
CLHC1Q8NHS4 LHFPL6-201ENST00000379589 2110 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLHC1Q8NHS4 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLHC1Q8NHS4 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CLHC1Q8NHS4 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.54■□□□□ 0.4
CLHC1Q8NHS4 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
CLHC1Q8NHS4 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.54■□□□□ 0.4
CLHC1Q8NHS4 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLHC1Q8NHS4 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLHC1Q8NHS4 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC17.54■□□□□ 0.4
CLHC1Q8NHS4 AC008550.1-201ENST00000511500 884 ntBASIC17.54■□□□□ 0.4
CLHC1Q8NHS4 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC17.54■□□□□ 0.4
CLHC1Q8NHS4 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC17.54■□□□□ 0.4
CLHC1Q8NHS4 NAT14-202ENST00000587400 416 ntTSL 5 BASIC17.54■□□□□ 0.4
CLHC1Q8NHS4 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC17.54■□□□□ 0.4
CLHC1Q8NHS4 AL590094.1-202ENST00000634619 1131 ntTSL 5 BASIC17.54■□□□□ 0.4
CLHC1Q8NHS4 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
CLHC1Q8NHS4 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
CLHC1Q8NHS4 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.54■□□□□ 0.4
CLHC1Q8NHS4 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.54■□□□□ 0.4
CLHC1Q8NHS4 CKMT1A-202ENST00000413453 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLHC1Q8NHS4 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLHC1Q8NHS4 WAC-202ENST00000347934 2839 ntTSL 5 BASIC17.54■□□□□ 0.4
CLHC1Q8NHS4 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLHC1Q8NHS4 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC17.54■□□□□ 0.4
CLHC1Q8NHS4 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
CLHC1Q8NHS4 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLHC1Q8NHS4 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLHC1Q8NHS4 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
CLHC1Q8NHS4 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC17.54■□□□□ 0.4
CLHC1Q8NHS4 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC17.54■□□□□ 0.4
CLHC1Q8NHS4 SDHAP2-201ENST00000455183 2001 ntBASIC17.54■□□□□ 0.4
CLHC1Q8NHS4 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC17.53■□□□□ 0.4
CLHC1Q8NHS4 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CLHC1Q8NHS4 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLHC1Q8NHS4 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.53■□□□□ 0.4
CLHC1Q8NHS4 AXIN1-201ENST00000262320 3643 ntAPPRIS P4 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLHC1Q8NHS4 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CLHC1Q8NHS4 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLHC1Q8NHS4 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLHC1Q8NHS4 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CLHC1Q8NHS4 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLHC1Q8NHS4 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC17.53■□□□□ 0.4
CLHC1Q8NHS4 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
CLHC1Q8NHS4 TP73-AS1-203ENST00000423764 2875 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLHC1Q8NHS4 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLHC1Q8NHS4 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC17.53■□□□□ 0.4
CLHC1Q8NHS4 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC17.53■□□□□ 0.4
CLHC1Q8NHS4 UNC93B2-201ENST00000285383 730 ntBASIC17.53■□□□□ 0.4
CLHC1Q8NHS4 BAALC-201ENST00000297574 801 ntTSL 3 BASIC17.53■□□□□ 0.4
CLHC1Q8NHS4 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC17.53■□□□□ 0.4
CLHC1Q8NHS4 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC17.53■□□□□ 0.4
CLHC1Q8NHS4 SGO1-AS1-202ENST00000448208 819 ntTSL 3 BASIC17.53■□□□□ 0.4
CLHC1Q8NHS4 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.53■□□□□ 0.4
CLHC1Q8NHS4 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLHC1Q8NHS4 CD40-201ENST00000372276 1623 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLHC1Q8NHS4 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.53■□□□□ 0.4
CLHC1Q8NHS4 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC17.53■□□□□ 0.4
CLHC1Q8NHS4 EML3-212ENST00000494176 2901 ntTSL 2 BASIC17.53■□□□□ 0.4
CLHC1Q8NHS4 EML3-216ENST00000529309 2909 ntTSL 2 BASIC17.53■□□□□ 0.4
CLHC1Q8NHS4 FCMR-201ENST00000367091 1950 ntAPPRIS P3 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLHC1Q8NHS4 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.53■□□□□ 0.4
CLHC1Q8NHS4 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.53■□□□□ 0.4
CLHC1Q8NHS4 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLHC1Q8NHS4 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLHC1Q8NHS4 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC17.52■□□□□ 0.4
CLHC1Q8NHS4 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CLHC1Q8NHS4 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLHC1Q8NHS4 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CLHC1Q8NHS4 CYP51A1P1-201ENST00000492267 1507 ntBASIC17.52■□□□□ 0.4
CLHC1Q8NHS4 AL163051.1-201ENST00000569214 1512 ntBASIC17.52■□□□□ 0.4
CLHC1Q8NHS4 LUC7L-221ENST00000629543 1520 ntTSL 5 BASIC17.52■□□□□ 0.4
CLHC1Q8NHS4 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLHC1Q8NHS4 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.52■□□□□ 0.4
CLHC1Q8NHS4 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC17.52■□□□□ 0.4
CLHC1Q8NHS4 SMARCB1-204ENST00000407422 1643 ntAPPRIS ALT1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLHC1Q8NHS4 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLHC1Q8NHS4 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLHC1Q8NHS4 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
CLHC1Q8NHS4 KRT18P23-201ENST00000435622 1283 ntBASIC17.52■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 31.5 ms