Protein–RNA interactions for Protein: Q5R1I8

Trav3-1, T cell receptor alpha variable 3-1 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav3-1Q5R1I8 Gm128-201ENSMUST00000090815 1959 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3-1Q5R1I8 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC10.39□□□□□ -0.75
Trav3-1Q5R1I8 Klhl8-203ENSMUST00000112815 2898 ntTSL 5 BASIC10.39□□□□□ -0.75
Trav3-1Q5R1I8 A130010J15Rik-201ENSMUST00000110831 2257 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-1Q5R1I8 Smg5-201ENSMUST00000001451 4448 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-1Q5R1I8 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-1Q5R1I8 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-1Q5R1I8 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-1Q5R1I8 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-1Q5R1I8 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC10.38□□□□□ -0.75
Trav3-1Q5R1I8 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-1Q5R1I8 Ap1s2-202ENSMUST00000069041 2226 ntAPPRIS P4 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-1Q5R1I8 Zfp108-203ENSMUST00000206777 2562 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-1Q5R1I8 Zfyve21-201ENSMUST00000021714 1308 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-1Q5R1I8 Stmn4-201ENSMUST00000074523 1303 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-1Q5R1I8 Col20a1-205ENSMUST00000228434 5012 ntAPPRIS P2 BASIC10.38□□□□□ -0.75
Trav3-1Q5R1I8 Wnt16-201ENSMUST00000031681 1663 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-1Q5R1I8 Smarcd2-203ENSMUST00000106843 2548 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-1Q5R1I8 Usf1-208ENSMUST00000161241 2167 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-1Q5R1I8 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC10.38□□□□□ -0.75
Trav3-1Q5R1I8 Brd3-202ENSMUST00000077737 5272 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-1Q5R1I8 Sipa1-201ENSMUST00000071857 3868 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-1Q5R1I8 Gramd1b-201ENSMUST00000045682 7488 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-1Q5R1I8 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-1Q5R1I8 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-1Q5R1I8 Sft2d1-210ENSMUST00000154553 1049 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-1Q5R1I8 Olfr718-ps1-204ENSMUST00000218872 963 ntAPPRIS ALT2 BASIC10.38□□□□□ -0.75
Trav3-1Q5R1I8 Fam89b-201ENSMUST00000099955 1197 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-1Q5R1I8 Col8a2-201ENSMUST00000070132 4332 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-1Q5R1I8 Rph3a-203ENSMUST00000202326 2621 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-1Q5R1I8 Sec62-201ENSMUST00000029256 3967 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-1Q5R1I8 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-1Q5R1I8 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-1Q5R1I8 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC10.38□□□□□ -0.75
Trav3-1Q5R1I8 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-1Q5R1I8 Zfp395-201ENSMUST00000066994 4229 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-1Q5R1I8 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-1Q5R1I8 Hoxd3os1-202ENSMUST00000139005 1701 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-1Q5R1I8 Rnf14-202ENSMUST00000170811 2886 ntTSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-1Q5R1I8 Ints6-202ENSMUST00000223585 10883 ntAPPRIS P1 BASIC10.38□□□□□ -0.75
Trav3-1Q5R1I8 Twf1-201ENSMUST00000023087 3025 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-1Q5R1I8 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-1Q5R1I8 Dysf-201ENSMUST00000081904 6660 ntAPPRIS P4 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-1Q5R1I8 Sema6c-201ENSMUST00000090821 3933 ntAPPRIS P3 TSL 5 BASIC10.38□□□□□ -0.75
Trav3-1Q5R1I8 Timp3-201ENSMUST00000020234 4722 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-1Q5R1I8 Sarm1-201ENSMUST00000061174 4083 ntAPPRIS P1 TSL 1 (best) BASIC10.38□□□□□ -0.75
Trav3-1Q5R1I8 Pax2-203ENSMUST00000174490 4358 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3-1Q5R1I8 Bnipl-202ENSMUST00000107195 1810 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3-1Q5R1I8 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC10.37□□□□□ -0.75
Trav3-1Q5R1I8 Arfip1-201ENSMUST00000098990 2799 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3-1Q5R1I8 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3-1Q5R1I8 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3-1Q5R1I8 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3-1Q5R1I8 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3-1Q5R1I8 Ogfod2-202ENSMUST00000119269 1474 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3-1Q5R1I8 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3-1Q5R1I8 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3-1Q5R1I8 Gm8770-201ENSMUST00000121113 1109 ntBASIC10.37□□□□□ -0.75
Trav3-1Q5R1I8 Apoe-206ENSMUST00000174064 1408 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3-1Q5R1I8 Gm27032-201ENSMUST00000183124 1116 ntBASIC10.37□□□□□ -0.75
Trav3-1Q5R1I8 Kcnma1-215ENSMUST00000190339 890 ntTSL 5 BASIC10.37□□□□□ -0.75
Trav3-1Q5R1I8 Krt8-ps-201ENSMUST00000208495 945 ntBASIC10.37□□□□□ -0.75
Trav3-1Q5R1I8 Gm11175-202ENSMUST00000211380 408 ntTSL 3 BASIC10.37□□□□□ -0.75
Trav3-1Q5R1I8 Zdhhc6-207ENSMUST00000224897 2168 ntAPPRIS P1 BASIC10.37□□□□□ -0.75
Trav3-1Q5R1I8 Snip1-201ENSMUST00000052183 2345 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3-1Q5R1I8 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Trav3-1Q5R1I8 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC10.37□□□□□ -0.75
Trav3-1Q5R1I8 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3-1Q5R1I8 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3-1Q5R1I8 Pcnx3-202ENSMUST00000113615 7264 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3-1Q5R1I8 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC10.37□□□□□ -0.75
Trav3-1Q5R1I8 Ets1-206ENSMUST00000184887 2107 ntTSL 5 BASIC10.37□□□□□ -0.75
Trav3-1Q5R1I8 B4galt2-203ENSMUST00000106421 1801 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3-1Q5R1I8 Polg2-201ENSMUST00000021060 1506 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3-1Q5R1I8 AL591207.1-203ENSMUST00000222401 1380 ntTSL 5 BASIC10.37□□□□□ -0.75
Trav3-1Q5R1I8 Camta1-201ENSMUST00000049790 8423 ntAPPRIS P2 TSL 5 BASIC10.37□□□□□ -0.75
Trav3-1Q5R1I8 Gm44065-201ENSMUST00000203184 3527 ntBASIC10.37□□□□□ -0.75
Trav3-1Q5R1I8 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3-1Q5R1I8 Grhl2-201ENSMUST00000022895 4947 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3-1Q5R1I8 Ccdc116-203ENSMUST00000115711 1915 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3-1Q5R1I8 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC10.37□□□□□ -0.75
Trav3-1Q5R1I8 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3-1Q5R1I8 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3-1Q5R1I8 Ppm1l-201ENSMUST00000029355 9417 ntAPPRIS P1 TSL 1 (best) BASIC10.37□□□□□ -0.75
Trav3-1Q5R1I8 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-1Q5R1I8 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-1Q5R1I8 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-1Q5R1I8 Adcyap1r1-202ENSMUST00000070756 6107 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-1Q5R1I8 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-1Q5R1I8 Pnkp-201ENSMUST00000003044 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-1Q5R1I8 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-1Q5R1I8 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-1Q5R1I8 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-1Q5R1I8 Tacr2-201ENSMUST00000020278 2258 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-1Q5R1I8 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC10.36□□□□□ -0.75
Trav3-1Q5R1I8 Fbxo46-201ENSMUST00000053109 4873 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-1Q5R1I8 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-1Q5R1I8 Grm1-201ENSMUST00000044306 6930 ntAPPRIS P3 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-1Q5R1I8 Igsf21-201ENSMUST00000039331 1979 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Trav3-1Q5R1I8 Ubxn10-203ENSMUST00000105811 2926 ntAPPRIS P1 TSL 1 (best) BASIC10.36□□□□□ -0.75
Retrieved 100 of 76,532 protein–RNA pairs in 99.3 ms