Protein–RNA interactions for Protein: Q3UNC9

Cks1brt, Cyclin-dependent kinases regulatory subunit, mousemouse

Predictions only

Length 96 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cks1brtQ3UNC9 Smarce1-201ENSMUST00000103133 2919 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cks1brtQ3UNC9 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cks1brtQ3UNC9 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cks1brtQ3UNC9 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cks1brtQ3UNC9 Cd72-202ENSMUST00000098104 2583 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cks1brtQ3UNC9 Myc-202ENSMUST00000159327 2186 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cks1brtQ3UNC9 Ahdc1-203ENSMUST00000105915 6341 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cks1brtQ3UNC9 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cks1brtQ3UNC9 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cks1brtQ3UNC9 Slc25a20-201ENSMUST00000035222 1783 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cks1brtQ3UNC9 Fam155a-206ENSMUST00000208933 1569 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cks1brtQ3UNC9 Tm9sf2-203ENSMUST00000171318 1494 ntTSL 5 BASIC11.09□□□□□ -0.63
Cks1brtQ3UNC9 Aunip-201ENSMUST00000105866 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cks1brtQ3UNC9 Gm9694-201ENSMUST00000193347 1189 ntBASIC11.09□□□□□ -0.63
Cks1brtQ3UNC9 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cks1brtQ3UNC9 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cks1brtQ3UNC9 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cks1brtQ3UNC9 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC11.09□□□□□ -0.63
Cks1brtQ3UNC9 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cks1brtQ3UNC9 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cks1brtQ3UNC9 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC11.09□□□□□ -0.63
Cks1brtQ3UNC9 Ddx39b-201ENSMUST00000068056 1739 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cks1brtQ3UNC9 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC11.09□□□□□ -0.63
Cks1brtQ3UNC9 Fn1-216ENSMUST00000189821 7410 ntAPPRIS ALT2 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cks1brtQ3UNC9 L2hgdh-201ENSMUST00000021370 3340 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cks1brtQ3UNC9 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cks1brtQ3UNC9 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC11.09□□□□□ -0.63
Cks1brtQ3UNC9 Dhps-201ENSMUST00000078665 1333 ntAPPRIS P1 TSL 1 (best) BASIC11.09□□□□□ -0.63
Cks1brtQ3UNC9 Spock1-202ENSMUST00000185502 4614 ntAPPRIS ALT1 TSL 5 BASIC11.08□□□□□ -0.63
Cks1brtQ3UNC9 St6gal1-201ENSMUST00000023601 4506 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.63
Cks1brtQ3UNC9 Tnfrsf13c-202ENSMUST00000109535 1983 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cks1brtQ3UNC9 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC11.08□□□□□ -0.64
Cks1brtQ3UNC9 Cog3-201ENSMUST00000049168 4222 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cks1brtQ3UNC9 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cks1brtQ3UNC9 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cks1brtQ3UNC9 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cks1brtQ3UNC9 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cks1brtQ3UNC9 Med22-202ENSMUST00000102899 3506 ntAPPRIS ALT1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cks1brtQ3UNC9 Mtcp1-201ENSMUST00000033542 1592 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cks1brtQ3UNC9 Dpf1-202ENSMUST00000065181 1574 ntAPPRIS ALT1 TSL 5 BASIC11.08□□□□□ -0.64
Cks1brtQ3UNC9 Kmt5c-202ENSMUST00000108582 2774 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cks1brtQ3UNC9 Gm45504-201ENSMUST00000211407 2107 ntBASIC11.08□□□□□ -0.64
Cks1brtQ3UNC9 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cks1brtQ3UNC9 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cks1brtQ3UNC9 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cks1brtQ3UNC9 Unc5d-201ENSMUST00000168630 9220 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cks1brtQ3UNC9 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cks1brtQ3UNC9 Nap1l5-201ENSMUST00000059539 1844 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Cks1brtQ3UNC9 Tmem54-203ENSMUST00000106064 1066 ntAPPRIS P3 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cks1brtQ3UNC9 Gm4285-201ENSMUST00000131222 902 ntTSL 2 BASIC11.08□□□□□ -0.64
Cks1brtQ3UNC9 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cks1brtQ3UNC9 AC104834.1-201ENSMUST00000222611 1056 ntAPPRIS P1 BASIC11.08□□□□□ -0.64
Cks1brtQ3UNC9 1700012B09Rik-201ENSMUST00000060330 688 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cks1brtQ3UNC9 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cks1brtQ3UNC9 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC11.08□□□□□ -0.64
Cks1brtQ3UNC9 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cks1brtQ3UNC9 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cks1brtQ3UNC9 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cks1brtQ3UNC9 Polr2a-202ENSMUST00000071213 5799 ntTSL 5 BASIC11.08□□□□□ -0.64
Cks1brtQ3UNC9 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC11.08□□□□□ -0.64
Cks1brtQ3UNC9 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cks1brtQ3UNC9 Ap1m1-201ENSMUST00000003117 2084 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cks1brtQ3UNC9 Bclaf3-201ENSMUST00000057180 2513 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cks1brtQ3UNC9 Mylk-201ENSMUST00000023538 7824 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cks1brtQ3UNC9 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
Cks1brtQ3UNC9 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cks1brtQ3UNC9 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cks1brtQ3UNC9 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cks1brtQ3UNC9 Dnmt3b-209ENSMUST00000109773 4148 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cks1brtQ3UNC9 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC11.08□□□□□ -0.64
Cks1brtQ3UNC9 Map3k12-201ENSMUST00000023812 5182 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cks1brtQ3UNC9 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC11.08□□□□□ -0.64
Cks1brtQ3UNC9 Vash1-201ENSMUST00000021681 2599 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cks1brtQ3UNC9 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cks1brtQ3UNC9 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cks1brtQ3UNC9 Arpc2-202ENSMUST00000113819 1313 ntTSL 5 BASIC11.08□□□□□ -0.64
Cks1brtQ3UNC9 Polr1c-201ENSMUST00000087026 1314 ntAPPRIS P1 TSL 1 (best) BASIC11.08□□□□□ -0.64
Cks1brtQ3UNC9 Gm13034-201ENSMUST00000121342 3177 ntBASIC11.08□□□□□ -0.64
Cks1brtQ3UNC9 Ptpn14-202ENSMUST00000097442 10746 ntAPPRIS P2 TSL 5 BASIC11.08□□□□□ -0.64
Cks1brtQ3UNC9 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cks1brtQ3UNC9 Sh3bp4-201ENSMUST00000066279 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cks1brtQ3UNC9 Atf7-202ENSMUST00000108828 2887 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cks1brtQ3UNC9 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cks1brtQ3UNC9 Dctd-201ENSMUST00000033966 2072 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cks1brtQ3UNC9 Mta3-203ENSMUST00000112350 1723 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cks1brtQ3UNC9 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cks1brtQ3UNC9 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cks1brtQ3UNC9 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cks1brtQ3UNC9 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cks1brtQ3UNC9 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC11.07□□□□□ -0.64
Cks1brtQ3UNC9 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cks1brtQ3UNC9 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC11.07□□□□□ -0.64
Cks1brtQ3UNC9 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cks1brtQ3UNC9 AC166341.7-201ENSMUST00000221698 126 ntBASIC11.07□□□□□ -0.64
Cks1brtQ3UNC9 Tmem171-201ENSMUST00000064347 1161 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cks1brtQ3UNC9 Dtd2-202ENSMUST00000085404 1012 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cks1brtQ3UNC9 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC11.07□□□□□ -0.64
Cks1brtQ3UNC9 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
Cks1brtQ3UNC9 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
Cks1brtQ3UNC9 Rsbn1l-202ENSMUST00000196780 7651 ntAPPRIS ALT2 TSL 1 (best) BASIC11.07□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 26 ms