Protein–RNA interactions for Protein: Q12770

SCAP, Sterol regulatory element-binding protein cleavage-activating protein, humanhuman

Predictions only

Length 1,279 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPQ12770 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SCAPQ12770 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC18.83■□□□□ 0.61
SCAPQ12770 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
SCAPQ12770 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
SCAPQ12770 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
SCAPQ12770 NTMT1-211ENST00000617943 1346 ntTSL 3 BASIC18.83■□□□□ 0.61
SCAPQ12770 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC18.83■□□□□ 0.61
SCAPQ12770 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SCAPQ12770 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SCAPQ12770 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SCAPQ12770 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SCAPQ12770 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC18.83■□□□□ 0.6
SCAPQ12770 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.83■□□□□ 0.6
SCAPQ12770 VENTXP5-201ENST00000523979 775 ntBASIC18.83■□□□□ 0.6
SCAPQ12770 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
SCAPQ12770 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC18.83■□□□□ 0.6
SCAPQ12770 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
SCAPQ12770 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC18.83■□□□□ 0.6
SCAPQ12770 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC18.83■□□□□ 0.6
SCAPQ12770 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
SCAPQ12770 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SCAPQ12770 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SCAPQ12770 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC18.83■□□□□ 0.6
SCAPQ12770 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
SCAPQ12770 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
SCAPQ12770 LINC00167-201ENST00000530583 1419 ntBASIC18.83■□□□□ 0.6
SCAPQ12770 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCAPQ12770 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCAPQ12770 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.82■□□□□ 0.6
SCAPQ12770 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SCAPQ12770 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCAPQ12770 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.82■□□□□ 0.6
SCAPQ12770 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC18.82■□□□□ 0.6
SCAPQ12770 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCAPQ12770 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCAPQ12770 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCAPQ12770 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC18.82■□□□□ 0.6
SCAPQ12770 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SCAPQ12770 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.82■□□□□ 0.6
SCAPQ12770 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC18.82■□□□□ 0.6
SCAPQ12770 C17orf49-208ENST00000552402 760 ntTSL 2 BASIC18.82■□□□□ 0.6
SCAPQ12770 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
SCAPQ12770 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC18.82■□□□□ 0.6
SCAPQ12770 AHCYL1-203ENST00000393614 4313 ntTSL 2 BASIC18.82■□□□□ 0.6
SCAPQ12770 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCAPQ12770 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC18.82■□□□□ 0.6
SCAPQ12770 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
SCAPQ12770 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SCAPQ12770 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SCAPQ12770 UBE2I-207ENST00000406620 1842 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SCAPQ12770 LEFTY2-201ENST00000366820 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCAPQ12770 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC18.81■□□□□ 0.6
SCAPQ12770 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCAPQ12770 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCAPQ12770 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCAPQ12770 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SCAPQ12770 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCAPQ12770 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCAPQ12770 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCAPQ12770 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SCAPQ12770 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
SCAPQ12770 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCAPQ12770 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC18.81■□□□□ 0.6
SCAPQ12770 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SCAPQ12770 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCAPQ12770 SP100-208ENST00000427101 1922 ntTSL 2 BASIC18.81■□□□□ 0.6
SCAPQ12770 PXMP4-201ENST00000217398 979 ntTSL 2 BASIC18.81■□□□□ 0.6
SCAPQ12770 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SCAPQ12770 GPR32-201ENST00000270590 1269 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
SCAPQ12770 SLX1A-202ENST00000345535 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCAPQ12770 SLX1B-202ENST00000351581 762 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCAPQ12770 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCAPQ12770 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SCAPQ12770 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC18.81■□□□□ 0.6
SCAPQ12770 EMC9-202ENST00000419198 953 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCAPQ12770 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
SCAPQ12770 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCAPQ12770 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCAPQ12770 ZNF444P1-201ENST00000559497 298 ntBASIC18.81■□□□□ 0.6
SCAPQ12770 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.81■□□□□ 0.6
SCAPQ12770 REXO1L9P-201ENST00000604264 2108 ntBASIC18.81■□□□□ 0.6
SCAPQ12770 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCAPQ12770 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.81■□□□□ 0.6
SCAPQ12770 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SCAPQ12770 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCAPQ12770 AC132938.6-201ENST00000623828 1655 ntBASIC18.81■□□□□ 0.6
SCAPQ12770 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
SCAPQ12770 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
SCAPQ12770 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC18.8■□□□□ 0.6
SCAPQ12770 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.8■□□□□ 0.6
SCAPQ12770 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SCAPQ12770 FLJ13224-201ENST00000313737 1514 ntBASIC18.8■□□□□ 0.6
SCAPQ12770 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.8■□□□□ 0.6
SCAPQ12770 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCAPQ12770 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
SCAPQ12770 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SCAPQ12770 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC18.8■□□□□ 0.6
SCAPQ12770 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
SCAPQ12770 DAP-202ENST00000432074 1048 ntTSL 2 BASIC18.8■□□□□ 0.6
SCAPQ12770 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC18.8■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms