Protein–RNA interactions for Protein: P55056

APOC4, Apolipoprotein C-IV, humanhuman

Predictions only

Length 127 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOC4P55056 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
APOC4P55056 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC13.38□□□□□ -0.27
APOC4P55056 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
APOC4P55056 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
APOC4P55056 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
APOC4P55056 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC13.38□□□□□ -0.27
APOC4P55056 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
APOC4P55056 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
APOC4P55056 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC13.38□□□□□ -0.27
APOC4P55056 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
APOC4P55056 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
APOC4P55056 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC13.38□□□□□ -0.27
APOC4P55056 AL353692.3-201ENST00000407031 1396 ntBASIC13.38□□□□□ -0.27
APOC4P55056 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC13.38□□□□□ -0.27
APOC4P55056 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC13.38□□□□□ -0.27
APOC4P55056 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC13.38□□□□□ -0.27
APOC4P55056 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC13.38□□□□□ -0.27
APOC4P55056 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC13.38□□□□□ -0.27
APOC4P55056 AC113404.2-201ENST00000507884 177 ntBASIC13.38□□□□□ -0.27
APOC4P55056 PP7080-204ENST00000510714 601 ntTSL 3 BASIC13.38□□□□□ -0.27
APOC4P55056 TFF3-204ENST00000518498 1109 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
APOC4P55056 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC13.38□□□□□ -0.27
APOC4P55056 PRR29-207ENST00000580752 458 ntTSL 3 BASIC13.38□□□□□ -0.27
APOC4P55056 TK1-205ENST00000590862 642 ntTSL 3 BASIC13.38□□□□□ -0.27
APOC4P55056 GPR162-201ENST00000311268 2768 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
APOC4P55056 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
APOC4P55056 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
APOC4P55056 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
APOC4P55056 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
APOC4P55056 ANKRD16-203ENST00000380094 2738 ntAPPRIS P1 TSL 2 BASIC13.38□□□□□ -0.27
APOC4P55056 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
APOC4P55056 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
APOC4P55056 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC13.38□□□□□ -0.27
APOC4P55056 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOC4P55056 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOC4P55056 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOC4P55056 MDGA1-203ENST00000434837 10736 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOC4P55056 PPP1CC-201ENST00000335007 2559 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOC4P55056 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOC4P55056 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
APOC4P55056 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
APOC4P55056 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC13.37□□□□□ -0.27
APOC4P55056 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOC4P55056 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOC4P55056 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC13.37□□□□□ -0.27
APOC4P55056 OSMR-202ENST00000502536 1740 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
APOC4P55056 ANO7L1-203ENST00000602586 1720 ntBASIC13.37□□□□□ -0.27
APOC4P55056 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOC4P55056 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
APOC4P55056 MYO1B-204ENST00000392318 5082 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOC4P55056 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOC4P55056 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOC4P55056 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
APOC4P55056 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC13.37□□□□□ -0.27
APOC4P55056 DRAXINP1-201ENST00000437611 948 ntBASIC13.37□□□□□ -0.27
APOC4P55056 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC13.37□□□□□ -0.27
APOC4P55056 LINC00265-3P-201ENST00000447588 903 ntBASIC13.37□□□□□ -0.27
APOC4P55056 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
APOC4P55056 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
APOC4P55056 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC13.37□□□□□ -0.27
APOC4P55056 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC13.37□□□□□ -0.27
APOC4P55056 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
APOC4P55056 CLEC4GP1-201ENST00000596555 870 ntBASIC13.37□□□□□ -0.27
APOC4P55056 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC13.37□□□□□ -0.27
APOC4P55056 LINC01711-201ENST00000598340 967 ntBASIC13.37□□□□□ -0.27
APOC4P55056 Z69720.1-201ENST00000601483 472 ntBASIC13.37□□□□□ -0.27
APOC4P55056 GXYLT1P4-201ENST00000613576 1192 ntBASIC13.37□□□□□ -0.27
APOC4P55056 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
APOC4P55056 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC13.37□□□□□ -0.27
APOC4P55056 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOC4P55056 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
APOC4P55056 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
APOC4P55056 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
APOC4P55056 NLE1-203ENST00000586869 5286 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
APOC4P55056 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC13.37□□□□□ -0.27
APOC4P55056 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC13.37□□□□□ -0.27
APOC4P55056 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC13.37□□□□□ -0.27
APOC4P55056 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC13.37□□□□□ -0.27
APOC4P55056 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC13.36□□□□□ -0.27
APOC4P55056 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
APOC4P55056 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
APOC4P55056 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC13.36□□□□□ -0.27
APOC4P55056 ZNF282-204ENST00000610704 3722 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
APOC4P55056 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
APOC4P55056 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
APOC4P55056 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
APOC4P55056 SLC25A24-204ENST00000569674 2357 ntBASIC13.36□□□□□ -0.27
APOC4P55056 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC13.36□□□□□ -0.27
APOC4P55056 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
APOC4P55056 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC13.36□□□□□ -0.27
APOC4P55056 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
APOC4P55056 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
APOC4P55056 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC13.36□□□□□ -0.27
APOC4P55056 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC13.36□□□□□ -0.27
APOC4P55056 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC13.36□□□□□ -0.27
APOC4P55056 KRT126P-201ENST00000549467 1181 ntBASIC13.36□□□□□ -0.27
APOC4P55056 CIB2-208ENST00000560618 804 ntTSL 2 BASIC13.36□□□□□ -0.27
APOC4P55056 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC13.36□□□□□ -0.27
APOC4P55056 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC13.36□□□□□ -0.27
APOC4P55056 SMIM20-205ENST00000614775 1190 ntTSL 5 BASIC13.36□□□□□ -0.27
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms