Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nedd8P29595 Gm37564-201ENSMUST00000195000 330 ntTSL 5 BASIC14.25□□□□□ -0.13
Nedd8P29595 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Nedd8P29595 Pts-208ENSMUST00000215416 439 ntTSL 2 BASIC14.25□□□□□ -0.13
Nedd8P29595 Fitm1-201ENSMUST00000022826 971 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nedd8P29595 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nedd8P29595 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Nedd8P29595 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nedd8P29595 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nedd8P29595 Eftud2-202ENSMUST00000107060 3339 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nedd8P29595 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nedd8P29595 Vps26b-201ENSMUST00000034470 3575 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nedd8P29595 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Nedd8P29595 Arid5a-208ENSMUST00000137906 5504 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Nedd8P29595 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nedd8P29595 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Nedd8P29595 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nedd8P29595 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Nedd8P29595 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.25□□□□□ -0.13
Nedd8P29595 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Nedd8P29595 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nedd8P29595 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nedd8P29595 Gss-201ENSMUST00000079691 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nedd8P29595 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
Nedd8P29595 Tmem108-204ENSMUST00000189588 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nedd8P29595 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC14.24□□□□□ -0.13
Nedd8P29595 Clybl-201ENSMUST00000026625 1231 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nedd8P29595 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nedd8P29595 Ccno-201ENSMUST00000038404 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nedd8P29595 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nedd8P29595 Cdk19-202ENSMUST00000095743 3973 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nedd8P29595 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nedd8P29595 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Nedd8P29595 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nedd8P29595 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14.24□□□□□ -0.13
Nedd8P29595 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nedd8P29595 Ablim1-209ENSMUST00000111546 2267 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Nedd8P29595 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Nedd8P29595 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nedd8P29595 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nedd8P29595 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nedd8P29595 Adal-201ENSMUST00000028702 2471 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nedd8P29595 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nedd8P29595 Utp3-201ENSMUST00000090413 1629 ntAPPRIS P1 BASIC14.23□□□□□ -0.13
Nedd8P29595 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nedd8P29595 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
Nedd8P29595 Nucb1-201ENSMUST00000033096 2111 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
Nedd8P29595 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nedd8P29595 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC14.23□□□□□ -0.13
Nedd8P29595 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC14.23□□□□□ -0.13
Nedd8P29595 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nedd8P29595 Pabpn1l-202ENSMUST00000212966 1113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nedd8P29595 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nedd8P29595 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nedd8P29595 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nedd8P29595 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nedd8P29595 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nedd8P29595 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nedd8P29595 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nedd8P29595 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nedd8P29595 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nedd8P29595 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nedd8P29595 Gm43205-201ENSMUST00000198622 1968 ntBASIC14.23□□□□□ -0.13
Nedd8P29595 Ino80-202ENSMUST00000110808 3928 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nedd8P29595 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nedd8P29595 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Nedd8P29595 Gnb1-201ENSMUST00000030940 3131 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nedd8P29595 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nedd8P29595 Lrp10-201ENSMUST00000022782 4228 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nedd8P29595 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nedd8P29595 Pard3b-202ENSMUST00000075374 8392 ntAPPRIS P2 TSL 5 BASIC14.23□□□□□ -0.13
Nedd8P29595 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Nedd8P29595 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nedd8P29595 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nedd8P29595 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nedd8P29595 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nedd8P29595 Spg20-204ENSMUST00000118118 3981 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nedd8P29595 Tssk6-201ENSMUST00000050373 1335 ntAPPRIS P1 BASIC14.22□□□□□ -0.13
Nedd8P29595 Gdpd2-202ENSMUST00000113744 2427 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nedd8P29595 Syt1-201ENSMUST00000064054 4745 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nedd8P29595 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.22□□□□□ -0.13
Nedd8P29595 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC14.22□□□□□ -0.13
Nedd8P29595 Krtcap3-205ENSMUST00000201625 902 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Nedd8P29595 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nedd8P29595 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nedd8P29595 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC14.22□□□□□ -0.13
Nedd8P29595 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Nedd8P29595 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
Nedd8P29595 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
Nedd8P29595 Serpinf1-201ENSMUST00000000769 1832 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nedd8P29595 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nedd8P29595 Cep126-201ENSMUST00000037397 3819 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nedd8P29595 Pcgf5-211ENSMUST00000225920 6443 ntBASIC14.22□□□□□ -0.13
Nedd8P29595 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.22□□□□□ -0.13
Nedd8P29595 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nedd8P29595 Gpr157-201ENSMUST00000094451 4900 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nedd8P29595 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
Nedd8P29595 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC14.21□□□□□ -0.13
Nedd8P29595 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC14.21□□□□□ -0.13
Nedd8P29595 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC14.21□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 42.4 ms