Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 NOC2LP2-201ENST00000407594 1944 ntBASIC17.23■□□□□ 0.35
SIMC1Q8NDZ2 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SIMC1Q8NDZ2 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SIMC1Q8NDZ2 CDH24-201ENST00000267383 2873 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SIMC1Q8NDZ2 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
SIMC1Q8NDZ2 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC17.23■□□□□ 0.35
SIMC1Q8NDZ2 NETO1-201ENST00000327305 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SIMC1Q8NDZ2 AC135050.7-201ENST00000624508 2218 ntBASIC17.23■□□□□ 0.35
SIMC1Q8NDZ2 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SIMC1Q8NDZ2 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SIMC1Q8NDZ2 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC17.23■□□□□ 0.35
SIMC1Q8NDZ2 CIRBP-202ENST00000413636 1606 ntTSL 2 BASIC17.23■□□□□ 0.35
SIMC1Q8NDZ2 EXOC3L2-201ENST00000252482 1230 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SIMC1Q8NDZ2 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SIMC1Q8NDZ2 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
SIMC1Q8NDZ2 GYG2P1-201ENST00000357871 623 ntTSL 3 BASIC17.23■□□□□ 0.35
SIMC1Q8NDZ2 AL137013.1-201ENST00000432946 1228 ntBASIC17.23■□□□□ 0.35
SIMC1Q8NDZ2 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC17.23■□□□□ 0.35
SIMC1Q8NDZ2 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SIMC1Q8NDZ2 PPOX-219ENST00000544598 813 ntTSL 2 BASIC17.23■□□□□ 0.35
SIMC1Q8NDZ2 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SIMC1Q8NDZ2 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
SIMC1Q8NDZ2 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC17.23■□□□□ 0.35
SIMC1Q8NDZ2 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
SIMC1Q8NDZ2 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC17.23■□□□□ 0.35
SIMC1Q8NDZ2 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
SIMC1Q8NDZ2 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC17.23■□□□□ 0.35
SIMC1Q8NDZ2 HCLS1-201ENST00000314583 2000 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SIMC1Q8NDZ2 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
SIMC1Q8NDZ2 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.23■□□□□ 0.35
SIMC1Q8NDZ2 EFTUD1P1-204ENST00000560401 1798 ntBASIC17.23■□□□□ 0.35
SIMC1Q8NDZ2 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC17.23■□□□□ 0.35
SIMC1Q8NDZ2 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC17.22■□□□□ 0.35
SIMC1Q8NDZ2 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SIMC1Q8NDZ2 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SIMC1Q8NDZ2 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC17.22■□□□□ 0.35
SIMC1Q8NDZ2 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SIMC1Q8NDZ2 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.22■□□□□ 0.35
SIMC1Q8NDZ2 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
SIMC1Q8NDZ2 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.22■□□□□ 0.35
SIMC1Q8NDZ2 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SIMC1Q8NDZ2 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC17.22■□□□□ 0.35
SIMC1Q8NDZ2 AC135776.1-201ENST00000319817 2481 ntBASIC17.22■□□□□ 0.35
SIMC1Q8NDZ2 ECE1-203ENST00000374893 2484 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SIMC1Q8NDZ2 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SIMC1Q8NDZ2 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SIMC1Q8NDZ2 SDHAP2-201ENST00000455183 2001 ntBASIC17.22■□□□□ 0.35
SIMC1Q8NDZ2 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC17.22■□□□□ 0.35
SIMC1Q8NDZ2 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SIMC1Q8NDZ2 OCIAD2-201ENST00000273860 636 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SIMC1Q8NDZ2 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SIMC1Q8NDZ2 SUV39H2-204ENST00000378325 1292 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SIMC1Q8NDZ2 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC17.22■□□□□ 0.35
SIMC1Q8NDZ2 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC17.22■□□□□ 0.35
SIMC1Q8NDZ2 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SIMC1Q8NDZ2 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.22■□□□□ 0.35
SIMC1Q8NDZ2 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
SIMC1Q8NDZ2 LINC00595-207ENST00000476909 792 ntTSL 2 BASIC17.22■□□□□ 0.35
SIMC1Q8NDZ2 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.22■□□□□ 0.35
SIMC1Q8NDZ2 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SIMC1Q8NDZ2 AC139887.4-201ENST00000607877 719 ntBASIC17.22■□□□□ 0.35
SIMC1Q8NDZ2 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.22■□□□□ 0.35
SIMC1Q8NDZ2 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.22■□□□□ 0.35
SIMC1Q8NDZ2 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
SIMC1Q8NDZ2 OCIAD2-210ENST00000620187 697 ntTSL 3 BASIC17.22■□□□□ 0.35
SIMC1Q8NDZ2 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.22■□□□□ 0.35
SIMC1Q8NDZ2 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
SIMC1Q8NDZ2 CDK11B-201ENST00000340677 2534 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SIMC1Q8NDZ2 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SIMC1Q8NDZ2 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SIMC1Q8NDZ2 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC17.22■□□□□ 0.35
SIMC1Q8NDZ2 KMT5A-202ENST00000402868 3140 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
SIMC1Q8NDZ2 BICD1-207ENST00000551848 1962 ntBASIC17.22■□□□□ 0.35
SIMC1Q8NDZ2 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
SIMC1Q8NDZ2 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SIMC1Q8NDZ2 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
SIMC1Q8NDZ2 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
SIMC1Q8NDZ2 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SIMC1Q8NDZ2 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SIMC1Q8NDZ2 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
SIMC1Q8NDZ2 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SIMC1Q8NDZ2 AL163051.1-201ENST00000569214 1512 ntBASIC17.21■□□□□ 0.35
SIMC1Q8NDZ2 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
SIMC1Q8NDZ2 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.21■□□□□ 0.35
SIMC1Q8NDZ2 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.21■□□□□ 0.35
SIMC1Q8NDZ2 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC17.21■□□□□ 0.35
SIMC1Q8NDZ2 CD276-201ENST00000318424 2738 ntTSL 5 BASIC17.21■□□□□ 0.35
SIMC1Q8NDZ2 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SIMC1Q8NDZ2 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SIMC1Q8NDZ2 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
SIMC1Q8NDZ2 P2RX2-208ENST00000542301 1881 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SIMC1Q8NDZ2 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
SIMC1Q8NDZ2 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC17.21■□□□□ 0.35
SIMC1Q8NDZ2 GAD2-202ENST00000376248 680 ntTSL 5 BASIC17.21■□□□□ 0.35
SIMC1Q8NDZ2 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SIMC1Q8NDZ2 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SIMC1Q8NDZ2 RCN1P1-201ENST00000400413 996 ntBASIC17.21■□□□□ 0.35
SIMC1Q8NDZ2 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
SIMC1Q8NDZ2 LIN28AP1-201ENST00000429574 405 ntBASIC17.21■□□□□ 0.35
SIMC1Q8NDZ2 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 45.8 ms