Protein–RNA interactions for Protein: Q8NCU1

CCDC197, Putative uncharacterized protein CCDC197, humanhuman

Predictions only

Length 140 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC197Q8NCU1 SAMD11-214ENST00000618323 2159 ntTSL 5 BASIC18.17■□□□□ 0.5
CCDC197Q8NCU1 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
CCDC197Q8NCU1 FAM210A-201ENST00000322247 4340 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
CCDC197Q8NCU1 GHR-201ENST00000230882 4560 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC197Q8NCU1 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC18.16■□□□□ 0.5
CCDC197Q8NCU1 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC197Q8NCU1 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC197Q8NCU1 AL031282.2-201ENST00000598846 5079 ntTSL 2 BASIC18.16■□□□□ 0.5
CCDC197Q8NCU1 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC197Q8NCU1 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC197Q8NCU1 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC197Q8NCU1 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC18.16■□□□□ 0.5
CCDC197Q8NCU1 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CCDC197Q8NCU1 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC197Q8NCU1 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC18.16■□□□□ 0.5
CCDC197Q8NCU1 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC18.16■□□□□ 0.5
CCDC197Q8NCU1 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC197Q8NCU1 RPS2P52-201ENST00000469610 820 ntBASIC18.16■□□□□ 0.5
CCDC197Q8NCU1 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC197Q8NCU1 ANAPC11-212ENST00000577425 603 ntTSL 3 BASIC18.16■□□□□ 0.5
CCDC197Q8NCU1 VIM-AS1-202ENST00000605833 918 ntTSL 3 BASIC18.16■□□□□ 0.5
CCDC197Q8NCU1 RAB43-208ENST00000615093 783 ntTSL 5 BASIC18.16■□□□□ 0.5
CCDC197Q8NCU1 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC197Q8NCU1 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
CCDC197Q8NCU1 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC18.16■□□□□ 0.5
CCDC197Q8NCU1 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC18.16■□□□□ 0.5
CCDC197Q8NCU1 AC004835.1-201ENST00000428222 2907 ntTSL 5 BASIC18.16■□□□□ 0.5
CCDC197Q8NCU1 OSBP2-202ENST00000401475 2468 ntTSL 2 BASIC18.16■□□□□ 0.5
CCDC197Q8NCU1 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC197Q8NCU1 ARHGAP44-202ENST00000340825 4211 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC197Q8NCU1 ARHGAP44-203ENST00000379672 4228 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC197Q8NCU1 PTPN21-208ENST00000556564 6166 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC197Q8NCU1 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC197Q8NCU1 VIM-201ENST00000224237 1868 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC197Q8NCU1 LMF1-201ENST00000262301 2621 ntAPPRIS P1 TSL 5 BASIC18.16■□□□□ 0.5
CCDC197Q8NCU1 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC18.16■□□□□ 0.5
CCDC197Q8NCU1 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.16■□□□□ 0.5
CCDC197Q8NCU1 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
CCDC197Q8NCU1 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CCDC197Q8NCU1 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC197Q8NCU1 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC197Q8NCU1 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC18.15■□□□□ 0.5
CCDC197Q8NCU1 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC197Q8NCU1 SCAP-201ENST00000265565 4394 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC197Q8NCU1 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.15■□□□□ 0.5
CCDC197Q8NCU1 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC197Q8NCU1 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC197Q8NCU1 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC197Q8NCU1 SMO-201ENST00000249373 3738 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC197Q8NCU1 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC18.15■□□□□ 0.5
CCDC197Q8NCU1 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC197Q8NCU1 NF2-202ENST00000338641 6025 ntAPPRIS P4 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC197Q8NCU1 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
CCDC197Q8NCU1 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.15■□□□□ 0.5
CCDC197Q8NCU1 CYP2T1P-201ENST00000432607 1285 ntBASIC18.15■□□□□ 0.5
CCDC197Q8NCU1 CNN2P6-201ENST00000439038 900 ntBASIC18.15■□□□□ 0.5
CCDC197Q8NCU1 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC18.15■□□□□ 0.5
CCDC197Q8NCU1 AC005829.2-201ENST00000571422 1056 ntBASIC18.15■□□□□ 0.5
CCDC197Q8NCU1 CCER2-201ENST00000571838 1057 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
CCDC197Q8NCU1 AC005181.1-201ENST00000604782 1256 ntBASIC18.15■□□□□ 0.5
CCDC197Q8NCU1 AL121906.2-201ENST00000621597 723 ntBASIC18.15■□□□□ 0.5
CCDC197Q8NCU1 AC000035.1-201ENST00000634116 343 ntTSL 5 BASIC18.15■□□□□ 0.5
CCDC197Q8NCU1 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CCDC197Q8NCU1 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC18.15■□□□□ 0.5
CCDC197Q8NCU1 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC197Q8NCU1 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.15■□□□□ 0.5
CCDC197Q8NCU1 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CCDC197Q8NCU1 PRSS53-201ENST00000280606 2181 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC197Q8NCU1 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC197Q8NCU1 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC197Q8NCU1 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC197Q8NCU1 AC105020.1-201ENST00000435356 2205 ntBASIC18.15■□□□□ 0.5
CCDC197Q8NCU1 KLC1-212ENST00000553286 3135 ntTSL 5 BASIC18.15■□□□□ 0.5
CCDC197Q8NCU1 DHX30-205ENST00000445061 4065 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC197Q8NCU1 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
CCDC197Q8NCU1 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC18.15■□□□□ 0.5
CCDC197Q8NCU1 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CCDC197Q8NCU1 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
CCDC197Q8NCU1 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC18.15■□□□□ 0.5
CCDC197Q8NCU1 NUP62-211ENST00000597029 2053 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CCDC197Q8NCU1 PHGDH-209ENST00000641074 1780 ntBASIC18.14■□□□□ 0.5
CCDC197Q8NCU1 GAS7-213ENST00000580865 2417 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
CCDC197Q8NCU1 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
CCDC197Q8NCU1 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC18.14■□□□□ 0.5
CCDC197Q8NCU1 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
CCDC197Q8NCU1 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC18.14■□□□□ 0.49
CCDC197Q8NCU1 BOC-212ENST00000485230 2173 ntTSL 2 BASIC18.14■□□□□ 0.49
CCDC197Q8NCU1 DMTN-223ENST00000523782 2235 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
CCDC197Q8NCU1 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC197Q8NCU1 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC18.14■□□□□ 0.49
CCDC197Q8NCU1 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC197Q8NCU1 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC18.14■□□□□ 0.49
CCDC197Q8NCU1 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC18.14■□□□□ 0.49
CCDC197Q8NCU1 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC197Q8NCU1 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC197Q8NCU1 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC197Q8NCU1 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC197Q8NCU1 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC197Q8NCU1 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
CCDC197Q8NCU1 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 27 ms