Protein–RNA interactions for Protein: Q3UPR0

Shisa3, Protein shisa-3 homolog, mousemouse

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa3Q3UPR0 9330121J05Rik-201ENSMUST00000192267 3009 ntBASIC13.32□□□□□ -0.28
Shisa3Q3UPR0 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Shisa3Q3UPR0 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Shisa3Q3UPR0 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Shisa3Q3UPR0 Itm2c-201ENSMUST00000027425 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Shisa3Q3UPR0 Gm26850-201ENSMUST00000181653 2669 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Shisa3Q3UPR0 Chtop-205ENSMUST00000107343 3118 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
Shisa3Q3UPR0 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Shisa3Q3UPR0 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Shisa3Q3UPR0 Gm9889-202ENSMUST00000206983 1577 ntBASIC13.32□□□□□ -0.28
Shisa3Q3UPR0 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.32□□□□□ -0.28
Shisa3Q3UPR0 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Shisa3Q3UPR0 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
Shisa3Q3UPR0 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC13.32□□□□□ -0.28
Shisa3Q3UPR0 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shisa3Q3UPR0 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shisa3Q3UPR0 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shisa3Q3UPR0 Large2-214ENSMUST00000176774 2377 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Shisa3Q3UPR0 Fam131c-201ENSMUST00000006380 1433 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shisa3Q3UPR0 Slc25a21-201ENSMUST00000044634 2609 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shisa3Q3UPR0 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shisa3Q3UPR0 Dnase1l2-201ENSMUST00000088506 1921 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shisa3Q3UPR0 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shisa3Q3UPR0 Tmem39a-214ENSMUST00000171687 2667 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Shisa3Q3UPR0 Ptprs-201ENSMUST00000067538 6855 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shisa3Q3UPR0 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC13.31□□□□□ -0.28
Shisa3Q3UPR0 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shisa3Q3UPR0 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shisa3Q3UPR0 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shisa3Q3UPR0 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shisa3Q3UPR0 Polr3d-202ENSMUST00000180358 2032 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shisa3Q3UPR0 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC13.31□□□□□ -0.28
Shisa3Q3UPR0 Psmd8-203ENSMUST00000186182 1512 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shisa3Q3UPR0 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shisa3Q3UPR0 Mir770-201ENSMUST00000103252 94 ntBASIC13.31□□□□□ -0.28
Shisa3Q3UPR0 Uba52-203ENSMUST00000125184 711 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shisa3Q3UPR0 Gm15545-202ENSMUST00000141011 899 ntTSL 3 BASIC13.31□□□□□ -0.28
Shisa3Q3UPR0 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC13.31□□□□□ -0.28
Shisa3Q3UPR0 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Shisa3Q3UPR0 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC13.31□□□□□ -0.28
Shisa3Q3UPR0 Stx3-208ENSMUST00000211641 1018 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Shisa3Q3UPR0 AC156832.2-201ENSMUST00000216217 1295 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Shisa3Q3UPR0 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shisa3Q3UPR0 Epb41l1-204ENSMUST00000103137 6490 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shisa3Q3UPR0 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shisa3Q3UPR0 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Shisa3Q3UPR0 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shisa3Q3UPR0 Gm7669-201ENSMUST00000210184 1603 ntBASIC13.31□□□□□ -0.28
Shisa3Q3UPR0 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shisa3Q3UPR0 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shisa3Q3UPR0 Nfe2l2-201ENSMUST00000102672 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shisa3Q3UPR0 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC13.31□□□□□ -0.28
Shisa3Q3UPR0 Smg9-201ENSMUST00000002280 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shisa3Q3UPR0 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC13.31□□□□□ -0.28
Shisa3Q3UPR0 Edn3-201ENSMUST00000029030 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shisa3Q3UPR0 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shisa3Q3UPR0 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shisa3Q3UPR0 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shisa3Q3UPR0 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shisa3Q3UPR0 Gk-201ENSMUST00000026039 4340 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shisa3Q3UPR0 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shisa3Q3UPR0 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shisa3Q3UPR0 Syn1-202ENSMUST00000115345 3261 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shisa3Q3UPR0 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Shisa3Q3UPR0 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shisa3Q3UPR0 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shisa3Q3UPR0 Gm6623-201ENSMUST00000173570 544 ntBASIC13.3□□□□□ -0.28
Shisa3Q3UPR0 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shisa3Q3UPR0 Gm29518-201ENSMUST00000190858 372 ntBASIC13.3□□□□□ -0.28
Shisa3Q3UPR0 Mrpl36-203ENSMUST00000222030 680 ntAPPRIS P1 TSL 3 BASIC13.3□□□□□ -0.28
Shisa3Q3UPR0 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shisa3Q3UPR0 Ankrd23-202ENSMUST00000193083 2277 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Shisa3Q3UPR0 Pde5a-204ENSMUST00000200389 7603 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Shisa3Q3UPR0 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shisa3Q3UPR0 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC13.3□□□□□ -0.28
Shisa3Q3UPR0 Ntng2-210ENSMUST00000177689 1679 ntAPPRIS ALT2 TSL 5 BASIC13.3□□□□□ -0.28
Shisa3Q3UPR0 Dhodh-201ENSMUST00000123605 2039 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shisa3Q3UPR0 Arhgap42-201ENSMUST00000093893 6116 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shisa3Q3UPR0 March11-203ENSMUST00000152841 1365 ntAPPRIS ALT2 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shisa3Q3UPR0 Clcn3-203ENSMUST00000093490 5518 ntAPPRIS ALT1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shisa3Q3UPR0 Fbxo34-203ENSMUST00000163324 3132 ntAPPRIS ALT2 TSL 2 BASIC13.3□□□□□ -0.28
Shisa3Q3UPR0 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shisa3Q3UPR0 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shisa3Q3UPR0 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.3□□□□□ -0.28
Shisa3Q3UPR0 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Shisa3Q3UPR0 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Shisa3Q3UPR0 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Shisa3Q3UPR0 Tap2-201ENSMUST00000025197 3442 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Shisa3Q3UPR0 Zcchc3-201ENSMUST00000099207 3073 ntAPPRIS P1 BASIC13.29□□□□□ -0.28
Shisa3Q3UPR0 Gatm-201ENSMUST00000028624 2389 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Shisa3Q3UPR0 Dlat-201ENSMUST00000034567 4035 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Shisa3Q3UPR0 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC13.29□□□□□ -0.28
Shisa3Q3UPR0 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Shisa3Q3UPR0 Entpd5-204ENSMUST00000117286 1691 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Shisa3Q3UPR0 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Shisa3Q3UPR0 Mycbp-201ENSMUST00000030400 1685 ntAPPRIS P1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Shisa3Q3UPR0 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC13.29□□□□□ -0.28
Shisa3Q3UPR0 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.29□□□□□ -0.28
Shisa3Q3UPR0 Gm33142-201ENSMUST00000193913 867 ntBASIC13.29□□□□□ -0.28
Shisa3Q3UPR0 Gm17808-201ENSMUST00000200859 894 ntBASIC13.29□□□□□ -0.28
Retrieved 100 of 76,532 protein–RNA pairs in 41.4 ms