Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 MIR5100-201ENST00000579544 119 ntBASIC21.84■■□□□ 1.09
PDS5AQ29RF7 AC011467.2-201ENST00000598425 242 ntBASIC21.84■■□□□ 1.09
PDS5AQ29RF7 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PDS5AQ29RF7 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC21.84■■□□□ 1.09
PDS5AQ29RF7 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC21.84■■□□□ 1.09
PDS5AQ29RF7 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC21.84■■□□□ 1.09
PDS5AQ29RF7 TPSD1-201ENST00000211076 1499 ntAPPRIS P2 TSL 1 (best) BASIC21.84■■□□□ 1.09
PDS5AQ29RF7 MAP3K3-201ENST00000361357 4818 ntTSL 1 (best) BASIC21.84■■□□□ 1.09
PDS5AQ29RF7 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC21.84■■□□□ 1.09
PDS5AQ29RF7 ARSE-201ENST00000381134 1853 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PDS5AQ29RF7 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
PDS5AQ29RF7 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC21.84■■□□□ 1.09
PDS5AQ29RF7 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC21.84■■□□□ 1.09
PDS5AQ29RF7 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC21.84■■□□□ 1.09
PDS5AQ29RF7 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC21.84■■□□□ 1.09
PDS5AQ29RF7 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC21.84■■□□□ 1.09
PDS5AQ29RF7 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC21.84■■□□□ 1.09
PDS5AQ29RF7 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC21.83■■□□□ 1.09
PDS5AQ29RF7 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PDS5AQ29RF7 TP73-AS1-210ENST00000637775 1455 ntBASIC21.83■■□□□ 1.09
PDS5AQ29RF7 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PDS5AQ29RF7 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PDS5AQ29RF7 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC21.83■■□□□ 1.09
PDS5AQ29RF7 WDR88-203ENST00000592765 651 ntTSL 5 BASIC21.83■■□□□ 1.09
PDS5AQ29RF7 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PDS5AQ29RF7 AL121912.1-201ENST00000603683 238 ntBASIC21.83■■□□□ 1.09
PDS5AQ29RF7 VPS51-217ENST00000639871 243 ntTSL 5 BASIC21.83■■□□□ 1.09
PDS5AQ29RF7 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PDS5AQ29RF7 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC21.83■■□□□ 1.09
PDS5AQ29RF7 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC21.83■■□□□ 1.09
PDS5AQ29RF7 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.09
PDS5AQ29RF7 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.83■■□□□ 1.08
PDS5AQ29RF7 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC21.83■■□□□ 1.08
PDS5AQ29RF7 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC21.83■■□□□ 1.08
PDS5AQ29RF7 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC21.83■■□□□ 1.08
PDS5AQ29RF7 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC21.83■■□□□ 1.08
PDS5AQ29RF7 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC21.83■■□□□ 1.08
PDS5AQ29RF7 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.83■■□□□ 1.08
PDS5AQ29RF7 ARHGAP8-201ENST00000336963 1487 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
PDS5AQ29RF7 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC21.83■■□□□ 1.08
PDS5AQ29RF7 RNF212-202ENST00000382968 2335 ntAPPRIS P3 TSL 1 (best) BASIC21.83■■□□□ 1.08
PDS5AQ29RF7 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC21.83■■□□□ 1.08
PDS5AQ29RF7 ANKRD18DP-201ENST00000335478 2171 ntTSL 2 BASIC21.82■■□□□ 1.08
PDS5AQ29RF7 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC21.82■■□□□ 1.08
PDS5AQ29RF7 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC21.82■■□□□ 1.08
PDS5AQ29RF7 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PDS5AQ29RF7 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
PDS5AQ29RF7 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PDS5AQ29RF7 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC21.82■■□□□ 1.08
PDS5AQ29RF7 AK2-210ENST00000548033 936 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PDS5AQ29RF7 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC21.82■■□□□ 1.08
PDS5AQ29RF7 SAP30L-201ENST00000297109 6226 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PDS5AQ29RF7 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PDS5AQ29RF7 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC21.82■■□□□ 1.08
PDS5AQ29RF7 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PDS5AQ29RF7 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PDS5AQ29RF7 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC21.82■■□□□ 1.08
PDS5AQ29RF7 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC21.82■■□□□ 1.08
PDS5AQ29RF7 PARD3-208ENST00000374789 6005 ntAPPRIS P3 TSL 1 (best) BASIC21.82■■□□□ 1.08
PDS5AQ29RF7 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.82■■□□□ 1.08
PDS5AQ29RF7 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC21.82■■□□□ 1.08
PDS5AQ29RF7 AC138028.1-201ENST00000333666 2137 ntTSL 2 BASIC21.82■■□□□ 1.08
PDS5AQ29RF7 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC21.82■■□□□ 1.08
PDS5AQ29RF7 AC105285.1-202ENST00000499322 1866 ntTSL 1 (best) BASIC21.82■■□□□ 1.08
PDS5AQ29RF7 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.82■■□□□ 1.08
PDS5AQ29RF7 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC21.82■■□□□ 1.08
PDS5AQ29RF7 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PDS5AQ29RF7 MIR202HG-201ENST00000300167 384 ntTSL 2 BASIC21.81■■□□□ 1.08
PDS5AQ29RF7 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC21.81■■□□□ 1.08
PDS5AQ29RF7 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC21.81■■□□□ 1.08
PDS5AQ29RF7 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC21.81■■□□□ 1.08
PDS5AQ29RF7 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC21.81■■□□□ 1.08
PDS5AQ29RF7 AP002469.2-201ENST00000531724 424 ntBASIC21.81■■□□□ 1.08
PDS5AQ29RF7 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
PDS5AQ29RF7 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PDS5AQ29RF7 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC21.81■■□□□ 1.08
PDS5AQ29RF7 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PDS5AQ29RF7 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PDS5AQ29RF7 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PDS5AQ29RF7 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC21.81■■□□□ 1.08
PDS5AQ29RF7 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PDS5AQ29RF7 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC21.81■■□□□ 1.08
PDS5AQ29RF7 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PDS5AQ29RF7 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC21.81■■□□□ 1.08
PDS5AQ29RF7 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PDS5AQ29RF7 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PDS5AQ29RF7 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC21.81■■□□□ 1.08
PDS5AQ29RF7 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PDS5AQ29RF7 DUTP2-201ENST00000519164 463 ntBASIC21.8■■□□□ 1.08
PDS5AQ29RF7 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PDS5AQ29RF7 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC21.8■■□□□ 1.08
PDS5AQ29RF7 AL591684.3-201ENST00000605187 298 ntBASIC21.8■■□□□ 1.08
PDS5AQ29RF7 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC21.8■■□□□ 1.08
PDS5AQ29RF7 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC21.8■■□□□ 1.08
PDS5AQ29RF7 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
PDS5AQ29RF7 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
PDS5AQ29RF7 AC004832.3-202ENST00000439838 1470 ntAPPRIS P1 TSL 2 BASIC21.8■■□□□ 1.08
PDS5AQ29RF7 POLD3-203ENST00000527458 2122 ntTSL 1 (best) BASIC21.8■■□□□ 1.08
PDS5AQ29RF7 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC21.8■■□□□ 1.08
PDS5AQ29RF7 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC21.8■■□□□ 1.08
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms