Protein–RNA interactions for Protein: Q16563

SYPL1, Synaptophysin-like protein 1, humanhuman

Predictions only

Length 259 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SYPL1Q16563 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC17.03■□□□□ 0.32
SYPL1Q16563 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC17.03■□□□□ 0.32
SYPL1Q16563 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SYPL1Q16563 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
SYPL1Q16563 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
SYPL1Q16563 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.03■□□□□ 0.32
SYPL1Q16563 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SYPL1Q16563 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SYPL1Q16563 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SYPL1Q16563 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
SYPL1Q16563 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.03■□□□□ 0.32
SYPL1Q16563 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SYPL1Q16563 AC134043.2-201ENST00000624206 2238 ntBASIC17.03■□□□□ 0.32
SYPL1Q16563 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SYPL1Q16563 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC17.03■□□□□ 0.32
SYPL1Q16563 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SYPL1Q16563 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
SYPL1Q16563 AC010653.2-201ENST00000623505 997 ntBASIC17.03■□□□□ 0.32
SYPL1Q16563 AC112497.1-201ENST00000624824 639 ntBASIC17.03■□□□□ 0.32
SYPL1Q16563 GLDC-219ENST00000640208 420 ntTSL 2 BASIC17.03■□□□□ 0.32
SYPL1Q16563 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SYPL1Q16563 REPS1-202ENST00000367663 2607 ntAPPRIS ALT1 TSL 5 BASIC17.03■□□□□ 0.32
SYPL1Q16563 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SYPL1Q16563 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
SYPL1Q16563 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SYPL1Q16563 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SYPL1Q16563 AP005717.1-201ENST00000500705 1899 ntTSL 5 BASIC17.03■□□□□ 0.32
SYPL1Q16563 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SYPL1Q16563 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SYPL1Q16563 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.03■□□□□ 0.32
SYPL1Q16563 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
SYPL1Q16563 BCL2-203ENST00000589955 5011 ntBASIC17.03■□□□□ 0.32
SYPL1Q16563 STK4-201ENST00000372801 2038 ntTSL 2 BASIC17.03■□□□□ 0.32
SYPL1Q16563 IGFBP7-AS1-201ENST00000499667 1389 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SYPL1Q16563 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC17.02■□□□□ 0.32
SYPL1Q16563 WDR25-202ENST00000402312 1969 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
SYPL1Q16563 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
SYPL1Q16563 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SYPL1Q16563 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
SYPL1Q16563 FLJ13224-201ENST00000313737 1514 ntBASIC17.02■□□□□ 0.32
SYPL1Q16563 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.02■□□□□ 0.32
SYPL1Q16563 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SYPL1Q16563 AP000997.3-201ENST00000623333 2250 ntBASIC17.02■□□□□ 0.32
SYPL1Q16563 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SYPL1Q16563 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
SYPL1Q16563 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SYPL1Q16563 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SYPL1Q16563 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC17.02■□□□□ 0.32
SYPL1Q16563 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
SYPL1Q16563 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.02■□□□□ 0.32
SYPL1Q16563 GXYLT1P6-201ENST00000456472 1187 ntBASIC17.02■□□□□ 0.32
SYPL1Q16563 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.02■□□□□ 0.32
SYPL1Q16563 EGLN1P1-201ENST00000531623 762 ntBASIC17.02■□□□□ 0.32
SYPL1Q16563 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.02■□□□□ 0.32
SYPL1Q16563 AC104390.1-201ENST00000555663 520 ntBASIC17.02■□□□□ 0.32
SYPL1Q16563 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC17.02■□□□□ 0.32
SYPL1Q16563 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
SYPL1Q16563 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
SYPL1Q16563 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SYPL1Q16563 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
SYPL1Q16563 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC17.01■□□□□ 0.31
SYPL1Q16563 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SYPL1Q16563 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SYPL1Q16563 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SYPL1Q16563 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SYPL1Q16563 TNFAIP1-202ENST00000544907 1656 ntTSL 2 BASIC17.01■□□□□ 0.31
SYPL1Q16563 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
SYPL1Q16563 MXRA8-209ENST00000477278 2728 ntTSL 5 BASIC17.01■□□□□ 0.31
SYPL1Q16563 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
SYPL1Q16563 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC17.01■□□□□ 0.31
SYPL1Q16563 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SYPL1Q16563 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
SYPL1Q16563 LINC01126-201ENST00000623515 1646 ntBASIC17.01■□□□□ 0.31
SYPL1Q16563 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SYPL1Q16563 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SYPL1Q16563 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SYPL1Q16563 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.01■□□□□ 0.31
SYPL1Q16563 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SYPL1Q16563 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SYPL1Q16563 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SYPL1Q16563 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SYPL1Q16563 AC010947.1-201ENST00000623454 693 ntBASIC17.01■□□□□ 0.31
SYPL1Q16563 AVPR1A-201ENST00000299178 5963 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SYPL1Q16563 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SYPL1Q16563 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SYPL1Q16563 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SYPL1Q16563 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SYPL1Q16563 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SYPL1Q16563 ZNF446-207ENST00000610298 1869 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SYPL1Q16563 ZNF74-202ENST00000400451 3159 ntAPPRIS P2 TSL 1 (best) BASIC17.01■□□□□ 0.31
SYPL1Q16563 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC17.01■□□□□ 0.31
SYPL1Q16563 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC17.01■□□□□ 0.31
SYPL1Q16563 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
SYPL1Q16563 CNNM3-201ENST00000305510 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
SYPL1Q16563 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SYPL1Q16563 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC17■□□□□ 0.31
SYPL1Q16563 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.31
SYPL1Q16563 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC17■□□□□ 0.31
SYPL1Q16563 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC17■□□□□ 0.31
SYPL1Q16563 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC17■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms