Protein–RNA interactions for Protein: P56377

AP1S2, AP-1 complex subunit sigma-2, humanhuman

Predictions only

Length 157 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
AP1S2P56377 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC17.81■□□□□ 0.44
AP1S2P56377 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
AP1S2P56377 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
AP1S2P56377 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC17.81■□□□□ 0.44
AP1S2P56377 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC17.81■□□□□ 0.44
AP1S2P56377 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
AP1S2P56377 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
AP1S2P56377 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
AP1S2P56377 AC099343.3-201ENST00000605834 2503 ntBASIC17.8■□□□□ 0.44
AP1S2P56377 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
AP1S2P56377 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.8■□□□□ 0.44
AP1S2P56377 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
AP1S2P56377 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC17.8■□□□□ 0.44
AP1S2P56377 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
AP1S2P56377 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
AP1S2P56377 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
AP1S2P56377 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
AP1S2P56377 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
AP1S2P56377 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
AP1S2P56377 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
AP1S2P56377 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
AP1S2P56377 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
AP1S2P56377 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
AP1S2P56377 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
AP1S2P56377 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
AP1S2P56377 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
AP1S2P56377 CD70-202ENST00000423145 881 ntTSL 2 BASIC17.8■□□□□ 0.44
AP1S2P56377 PVRIG2P-201ENST00000435460 978 ntBASIC17.8■□□□□ 0.44
AP1S2P56377 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
AP1S2P56377 GCSHP2-201ENST00000560971 527 ntBASIC17.8■□□□□ 0.44
AP1S2P56377 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
AP1S2P56377 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.8■□□□□ 0.44
AP1S2P56377 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
AP1S2P56377 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
AP1S2P56377 AL096828.2-201ENST00000567259 1965 ntBASIC17.8■□□□□ 0.44
AP1S2P56377 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
AP1S2P56377 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
AP1S2P56377 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC17.8■□□□□ 0.44
AP1S2P56377 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.8■□□□□ 0.44
AP1S2P56377 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
AP1S2P56377 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
AP1S2P56377 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC17.8■□□□□ 0.44
AP1S2P56377 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC17.8■□□□□ 0.44
AP1S2P56377 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
AP1S2P56377 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
AP1S2P56377 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
AP1S2P56377 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
AP1S2P56377 IL15-201ENST00000296545 2472 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
AP1S2P56377 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
AP1S2P56377 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
AP1S2P56377 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
AP1S2P56377 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
AP1S2P56377 PKN1-201ENST00000242783 3069 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
AP1S2P56377 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
AP1S2P56377 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC17.79■□□□□ 0.44
AP1S2P56377 AC211429.1-201ENST00000415277 523 ntBASIC17.79■□□□□ 0.44
AP1S2P56377 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.79■□□□□ 0.44
AP1S2P56377 HOXD8-203ENST00000450510 1268 ntAPPRIS ALT2 TSL 1 (best) BASIC17.79■□□□□ 0.44
AP1S2P56377 AP003396.1-201ENST00000501918 507 ntTSL 5 BASIC17.79■□□□□ 0.44
AP1S2P56377 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.79■□□□□ 0.44
AP1S2P56377 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC17.79■□□□□ 0.44
AP1S2P56377 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC17.79■□□□□ 0.44
AP1S2P56377 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC17.79■□□□□ 0.44
AP1S2P56377 AL023973.1-201ENST00000624619 620 ntBASIC17.79■□□□□ 0.44
AP1S2P56377 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
AP1S2P56377 AC073508.3-201ENST00000619697 1419 ntBASIC17.79■□□□□ 0.44
AP1S2P56377 LINC01126-201ENST00000623515 1646 ntBASIC17.79■□□□□ 0.44
AP1S2P56377 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC17.79■□□□□ 0.44
AP1S2P56377 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC17.79■□□□□ 0.44
AP1S2P56377 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC17.79■□□□□ 0.44
AP1S2P56377 LETM1P2-201ENST00000597330 2178 ntBASIC17.79■□□□□ 0.44
AP1S2P56377 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC17.79■□□□□ 0.44
AP1S2P56377 DNLZ-202ENST00000371739 2934 ntTSL 5 BASIC17.78■□□□□ 0.44
AP1S2P56377 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC17.78■□□□□ 0.44
AP1S2P56377 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
AP1S2P56377 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
AP1S2P56377 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
AP1S2P56377 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
AP1S2P56377 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
AP1S2P56377 CACTIN-201ENST00000221899 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
AP1S2P56377 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
AP1S2P56377 PBK-203ENST00000522944 1499 ntTSL 2 BASIC17.78■□□□□ 0.44
AP1S2P56377 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
AP1S2P56377 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
AP1S2P56377 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
AP1S2P56377 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC17.78■□□□□ 0.44
AP1S2P56377 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.78■□□□□ 0.44
AP1S2P56377 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.78■□□□□ 0.44
AP1S2P56377 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
AP1S2P56377 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
AP1S2P56377 CLDND2-203ENST00000601435 575 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
AP1S2P56377 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.78■□□□□ 0.44
AP1S2P56377 AL157888.1-201ENST00000631930 593 ntBASIC17.78■□□□□ 0.44
AP1S2P56377 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
AP1S2P56377 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
AP1S2P56377 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
AP1S2P56377 SNX11-201ENST00000359238 2315 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
AP1S2P56377 SAMD11-212ENST00000617307 2314 ntAPPRIS ALT2 TSL 5 BASIC17.78■□□□□ 0.44
AP1S2P56377 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC17.78■□□□□ 0.44
AP1S2P56377 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC17.78■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 61.6 ms