Protein–RNA interactions for Protein: P28702

RXRB, Retinoic acid receptor RXR-beta, humanhuman

Predictions only

Length 533 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RXRBP28702 PC-214ENST00000628663 1470 ntTSL 5 BASIC23.83■■□□□ 1.41
RXRBP28702 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC23.83■■□□□ 1.41
RXRBP28702 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
RXRBP28702 FAM129C-211ENST00000600871 1822 ntAPPRIS ALT2 TSL 5 BASIC23.83■■□□□ 1.41
RXRBP28702 NABP1-203ENST00000409510 843 ntTSL 5 BASIC23.83■■□□□ 1.41
RXRBP28702 NME2P1-201ENST00000426182 414 ntBASIC23.83■■□□□ 1.41
RXRBP28702 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC23.83■■□□□ 1.41
RXRBP28702 AC091053.1-201ENST00000529883 744 ntTSL 3 BASIC23.83■■□□□ 1.41
RXRBP28702 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC23.83■■□□□ 1.41
RXRBP28702 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC23.83■■□□□ 1.41
RXRBP28702 AC027307.3-201ENST00000594262 1100 ntBASIC23.83■■□□□ 1.41
RXRBP28702 ZNF446-208ENST00000622313 1884 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
RXRBP28702 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC23.83■■□□□ 1.4
RXRBP28702 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RXRBP28702 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC23.82■■□□□ 1.4
RXRBP28702 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RXRBP28702 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RXRBP28702 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RXRBP28702 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC23.82■■□□□ 1.4
RXRBP28702 AC103736.1-203ENST00000524565 872 ntTSL 3 BASIC23.82■■□□□ 1.4
RXRBP28702 AC104971.3-201ENST00000589794 335 ntTSL 2 BASIC23.82■■□□□ 1.4
RXRBP28702 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC23.82■■□□□ 1.4
RXRBP28702 EGR4-202ENST00000545030 2372 ntAPPRIS P2 TSL 1 (best) BASIC23.82■■□□□ 1.4
RXRBP28702 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RXRBP28702 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC23.82■■□□□ 1.4
RXRBP28702 Z98044.1-201ENST00000632503 1764 ntBASIC23.82■■□□□ 1.4
RXRBP28702 FAM193A-211ENST00000637812 4885 ntAPPRIS ALT2 TSL 5 BASIC23.82■■□□□ 1.4
RXRBP28702 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC23.82■■□□□ 1.4
RXRBP28702 AC025580.3-201ENST00000617932 1424 ntBASIC23.82■■□□□ 1.4
RXRBP28702 SWSAP1-201ENST00000312423 1684 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RXRBP28702 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC23.82■■□□□ 1.4
RXRBP28702 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
RXRBP28702 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC23.82■■□□□ 1.4
RXRBP28702 GLB1-202ENST00000307377 2018 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
RXRBP28702 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC23.81■■□□□ 1.4
RXRBP28702 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RXRBP28702 CRB3P1-201ENST00000449338 276 ntBASIC23.81■■□□□ 1.4
RXRBP28702 MACROD2-AS1-202ENST00000455291 663 ntTSL 2 BASIC23.81■■□□□ 1.4
RXRBP28702 SPATA8-AS1-201ENST00000558722 465 ntTSL 3 BASIC23.81■■□□□ 1.4
RXRBP28702 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC23.81■■□□□ 1.4
RXRBP28702 REXO1L3P-201ENST00000622202 1288 ntBASIC23.81■■□□□ 1.4
RXRBP28702 ECE2-202ENST00000357474 2667 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
RXRBP28702 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RXRBP28702 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC23.81■■□□□ 1.4
RXRBP28702 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RXRBP28702 ERGIC1-202ENST00000393784 2881 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RXRBP28702 SOX10-202ENST00000396884 2879 ntAPPRIS P1 TSL 1 (best) BASIC23.81■■□□□ 1.4
RXRBP28702 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC23.8■■□□□ 1.4
RXRBP28702 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RXRBP28702 ELFN1-AS1-202ENST00000453348 637 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RXRBP28702 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC23.8■■□□□ 1.4
RXRBP28702 ARTN-206ENST00000472435 402 ntTSL 3 BASIC23.8■■□□□ 1.4
RXRBP28702 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RXRBP28702 BRF1-219ENST00000551787 824 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
RXRBP28702 COQ6-210ENST00000554920 649 ntTSL 3 BASIC23.8■■□□□ 1.4
RXRBP28702 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC23.8■■□□□ 1.4
RXRBP28702 AC010654.1-201ENST00000615722 808 ntBASIC23.8■■□□□ 1.4
RXRBP28702 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC23.8■■□□□ 1.4
RXRBP28702 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RXRBP28702 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
RXRBP28702 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC23.79■■□□□ 1.4
RXRBP28702 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC23.79■■□□□ 1.4
RXRBP28702 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
RXRBP28702 SIGLEC16-201ENST00000599858 1437 ntBASIC23.79■■□□□ 1.4
RXRBP28702 LEXM-201ENST00000358193 1777 ntAPPRIS P3 TSL 1 (best) BASIC23.79■■□□□ 1.4
RXRBP28702 AC003669.1-201ENST00000334569 611 ntBASIC23.79■■□□□ 1.4
RXRBP28702 RAC2-204ENST00000406508 893 ntTSL 5 BASIC23.79■■□□□ 1.4
RXRBP28702 ARSEP1-201ENST00000420443 635 ntBASIC23.79■■□□□ 1.4
RXRBP28702 RHOQP3-201ENST00000437982 621 ntBASIC23.79■■□□□ 1.4
RXRBP28702 RPS15P9-201ENST00000494093 319 ntBASIC23.79■■□□□ 1.4
RXRBP28702 NAA50-208ENST00000497255 789 ntTSL 5 BASIC23.79■■□□□ 1.4
RXRBP28702 LACTB2-203ENST00000522447 1034 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
RXRBP28702 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
RXRBP28702 VPS29-207ENST00000549970 818 ntTSL 3 BASIC23.79■■□□□ 1.4
RXRBP28702 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC23.79■■□□□ 1.4
RXRBP28702 AC217774.2-201ENST00000580347 560 ntTSL 4 BASIC23.79■■□□□ 1.4
RXRBP28702 ZNF667-AS1-204ENST00000588158 921 ntTSL 3 BASIC23.79■■□□□ 1.4
RXRBP28702 AC010336.3-201ENST00000597156 667 ntTSL 2 BASIC23.79■■□□□ 1.4
RXRBP28702 RAB9A-203ENST00000618931 737 ntAPPRIS P1 TSL 2 BASIC23.79■■□□□ 1.4
RXRBP28702 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC23.79■■□□□ 1.4
RXRBP28702 PCGF2-206ENST00000618941 1499 ntTSL 5 BASIC23.79■■□□□ 1.4
RXRBP28702 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC23.79■■□□□ 1.4
RXRBP28702 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC23.78■■□□□ 1.4
RXRBP28702 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC23.78■■□□□ 1.4
RXRBP28702 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC23.78■■□□□ 1.4
RXRBP28702 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC23.78■■□□□ 1.4
RXRBP28702 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC23.78■■□□□ 1.4
RXRBP28702 CD8B-201ENST00000331469 832 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
RXRBP28702 ZHX1-C8orf76-201ENST00000357082 1257 ntAPPRIS P2 TSL 2 BASIC23.78■■□□□ 1.4
RXRBP28702 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
RXRBP28702 MIR943-201ENST00000401286 94 ntBASIC23.78■■□□□ 1.4
RXRBP28702 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC23.78■■□□□ 1.4
RXRBP28702 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC23.78■■□□□ 1.4
RXRBP28702 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
RXRBP28702 TVP23B-206ENST00000574226 1080 ntAPPRIS ALT1 TSL 1 (best) BASIC23.78■■□□□ 1.4
RXRBP28702 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC23.78■■□□□ 1.4
RXRBP28702 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC23.78■■□□□ 1.4
RXRBP28702 HFE2-206ENST00000634927 506 ntTSL 4 BASIC23.78■■□□□ 1.4
RXRBP28702 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC23.78■■□□□ 1.4
RXRBP28702 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC23.78■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 30.6 ms