Protein–RNA interactions for Protein: P22001

KCNA3, Potassium voltage-gated channel subfamily A member 3, humanhuman

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNA3P22001 AC097374.2-201ENST00000618617 1306 ntBASIC22.32■■□□□ 1.16
KCNA3P22001 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC22.32■■□□□ 1.16
KCNA3P22001 TMEM205-201ENST00000354882 1034 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
KCNA3P22001 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
KCNA3P22001 LHX6-205ENST00000464484 666 ntTSL 2 BASIC22.32■■□□□ 1.16
KCNA3P22001 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
KCNA3P22001 SPCS2P1-201ENST00000561636 679 ntBASIC22.32■■□□□ 1.16
KCNA3P22001 TMEM205-205ENST00000586590 677 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
KCNA3P22001 TMEM205-207ENST00000586956 1003 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
KCNA3P22001 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC22.32■■□□□ 1.16
KCNA3P22001 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
KCNA3P22001 AC239800.4-201ENST00000603712 296 ntBASIC22.32■■□□□ 1.16
KCNA3P22001 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
KCNA3P22001 AC106028.4-201ENST00000614509 607 ntBASIC22.32■■□□□ 1.16
KCNA3P22001 AC005593.1-201ENST00000624894 515 ntBASIC22.32■■□□□ 1.16
KCNA3P22001 AC010507.1-202ENST00000633286 381 ntTSL 3 BASIC22.32■■□□□ 1.16
KCNA3P22001 ORAI3-201ENST00000318663 2206 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
KCNA3P22001 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
KCNA3P22001 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
KCNA3P22001 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC22.32■■□□□ 1.16
KCNA3P22001 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
KCNA3P22001 ARFRP1-214ENST00000622789 2559 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
KCNA3P22001 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
KCNA3P22001 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC22.31■■□□□ 1.16
KCNA3P22001 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC22.31■■□□□ 1.16
KCNA3P22001 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
KCNA3P22001 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
KCNA3P22001 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
KCNA3P22001 AC002310.6-201ENST00000624451 1377 ntBASIC22.31■■□□□ 1.16
KCNA3P22001 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
KCNA3P22001 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
KCNA3P22001 ZNF789-202ENST00000379724 510 ntTSL 2 BASIC22.31■■□□□ 1.16
KCNA3P22001 CD9-202ENST00000382515 1229 ntTSL 5 BASIC22.31■■□□□ 1.16
KCNA3P22001 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC22.31■■□□□ 1.16
KCNA3P22001 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC22.31■■□□□ 1.16
KCNA3P22001 COX20P2-201ENST00000452636 358 ntBASIC22.31■■□□□ 1.16
KCNA3P22001 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC22.31■■□□□ 1.16
KCNA3P22001 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
KCNA3P22001 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC22.31■■□□□ 1.16
KCNA3P22001 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC22.31■■□□□ 1.16
KCNA3P22001 PGM5P2-202ENST00000637225 1043 ntBASIC22.31■■□□□ 1.16
KCNA3P22001 KAT2B-201ENST00000263754 4833 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
KCNA3P22001 SNX17-201ENST00000233575 2044 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
KCNA3P22001 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC22.31■■□□□ 1.16
KCNA3P22001 ALDH16A1-202ENST00000455361 2470 ntTSL 2 BASIC22.31■■□□□ 1.16
KCNA3P22001 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC22.31■■□□□ 1.16
KCNA3P22001 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC22.31■■□□□ 1.16
KCNA3P22001 AC004817.3-201ENST00000602957 2129 ntBASIC22.3■■□□□ 1.16
KCNA3P22001 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
KCNA3P22001 WFIKKN1-201ENST00000319070 2028 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
KCNA3P22001 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
KCNA3P22001 CHD1L-201ENST00000361293 2484 ntTSL 2 BASIC22.3■■□□□ 1.16
KCNA3P22001 SENP5-204ENST00000445299 2491 ntTSL 2 BASIC22.3■■□□□ 1.16
KCNA3P22001 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC22.3■■□□□ 1.16
KCNA3P22001 PNMT-202ENST00000394246 821 ntTSL 2 BASIC22.3■■□□□ 1.16
KCNA3P22001 ODF3B-204ENST00000405135 917 ntTSL 5 BASIC22.3■■□□□ 1.16
KCNA3P22001 AKIRIN1-203ENST00000446189 1243 ntTSL 2 BASIC22.3■■□□□ 1.16
KCNA3P22001 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC22.3■■□□□ 1.16
KCNA3P22001 SDCCAG3P1-201ENST00000589292 1150 ntBASIC22.3■■□□□ 1.16
KCNA3P22001 AC073592.4-201ENST00000623827 446 ntBASIC22.3■■□□□ 1.16
KCNA3P22001 AL022326.1-202ENST00000641533 845 ntBASIC22.3■■□□□ 1.16
KCNA3P22001 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
KCNA3P22001 AL137060.1-201ENST00000618151 2648 ntBASIC22.3■■□□□ 1.16
KCNA3P22001 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC22.3■■□□□ 1.16
KCNA3P22001 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
KCNA3P22001 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC22.3■■□□□ 1.16
KCNA3P22001 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
KCNA3P22001 NFKBIE-204ENST00000619360 2327 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
KCNA3P22001 PLAUR-201ENST00000221264 1610 ntAPPRIS ALT2 TSL 1 (best) BASIC22.29■■□□□ 1.16
KCNA3P22001 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
KCNA3P22001 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
KCNA3P22001 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
KCNA3P22001 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
KCNA3P22001 GPR75-201ENST00000394705 2115 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
KCNA3P22001 WDR53-203ENST00000429115 683 ntTSL 2 BASIC22.29■■□□□ 1.16
KCNA3P22001 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC22.29■■□□□ 1.16
KCNA3P22001 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC22.29■■□□□ 1.16
KCNA3P22001 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC22.29■■□□□ 1.16
KCNA3P22001 CYB561D1-209ENST00000533024 913 ntTSL 2 BASIC22.29■■□□□ 1.16
KCNA3P22001 MIR1199-201ENST00000621445 119 ntBASIC22.29■■□□□ 1.16
KCNA3P22001 RAB1B-201ENST00000311481 2007 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
KCNA3P22001 PIF1-202ENST00000333425 2278 ntTSL 1 (best) BASIC22.29■■□□□ 1.16
KCNA3P22001 CCDC47-202ENST00000403162 2195 ntAPPRIS P1 TSL 2 BASIC22.29■■□□□ 1.16
KCNA3P22001 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC22.29■■□□□ 1.16
KCNA3P22001 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC22.29■■□□□ 1.16
KCNA3P22001 ATAD3A-202ENST00000378755 2612 ntTSL 2 BASIC22.28■■□□□ 1.16
KCNA3P22001 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC22.28■■□□□ 1.16
KCNA3P22001 INTS11-208ENST00000435064 2148 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
KCNA3P22001 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC22.28■■□□□ 1.16
KCNA3P22001 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC22.28■■□□□ 1.16
KCNA3P22001 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC22.28■■□□□ 1.16
KCNA3P22001 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC22.28■■□□□ 1.16
KCNA3P22001 DNAJC4-203ENST00000355040 759 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
KCNA3P22001 ADARB2-201ENST00000381305 703 ntTSL 2 BASIC22.28■■□□□ 1.16
KCNA3P22001 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC22.28■■□□□ 1.16
KCNA3P22001 AL096828.1-201ENST00000423020 542 ntTSL 4 BASIC22.28■■□□□ 1.16
KCNA3P22001 AC244107.1-201ENST00000442033 332 ntBASIC22.28■■□□□ 1.16
KCNA3P22001 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC22.28■■□□□ 1.16
KCNA3P22001 AC026191.1-201ENST00000491930 829 ntTSL 3 BASIC22.28■■□□□ 1.16
KCNA3P22001 AC124067.2-201ENST00000521989 510 ntTSL 2 BASIC22.28■■□□□ 1.16
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms