Protein–RNA interactions for Protein: O96005

CLPTM1, Cleft lip and palate transmembrane protein 1, humanhuman

Predictions only

Length 669 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1O96005 NFATC4-211ENST00000554344 2955 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLPTM1O96005 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
CLPTM1O96005 DVL1-202ENST00000378891 2926 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLPTM1O96005 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC17.27■□□□□ 0.36
CLPTM1O96005 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLPTM1O96005 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLPTM1O96005 REXO2-201ENST00000265881 1161 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLPTM1O96005 MRPL12-201ENST00000333676 1028 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLPTM1O96005 GAS7-202ENST00000396115 929 ntTSL 5 BASIC17.27■□□□□ 0.36
CLPTM1O96005 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLPTM1O96005 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC17.27■□□□□ 0.36
CLPTM1O96005 OTUB1-203ENST00000428192 1296 ntAPPRIS P2 TSL 2 BASIC17.27■□□□□ 0.36
CLPTM1O96005 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC17.27■□□□□ 0.36
CLPTM1O96005 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC17.27■□□□□ 0.36
CLPTM1O96005 REXO2-208ENST00000539754 791 ntTSL 2 BASIC17.27■□□□□ 0.36
CLPTM1O96005 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC17.27■□□□□ 0.36
CLPTM1O96005 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC17.27■□□□□ 0.36
CLPTM1O96005 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLPTM1O96005 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC17.27■□□□□ 0.36
CLPTM1O96005 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.36
CLPTM1O96005 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC17.27■□□□□ 0.36
CLPTM1O96005 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC17.27■□□□□ 0.35
CLPTM1O96005 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC17.27■□□□□ 0.35
CLPTM1O96005 CPZ-201ENST00000315782 2136 ntAPPRIS P3 TSL 1 (best) BASIC17.27■□□□□ 0.35
CLPTM1O96005 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CLPTM1O96005 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CLPTM1O96005 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
CLPTM1O96005 GPER1-202ENST00000397088 2639 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CLPTM1O96005 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC17.27■□□□□ 0.35
CLPTM1O96005 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
CLPTM1O96005 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC17.27■□□□□ 0.35
CLPTM1O96005 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC17.27■□□□□ 0.35
CLPTM1O96005 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.27■□□□□ 0.35
CLPTM1O96005 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.27■□□□□ 0.35
CLPTM1O96005 AC093677.2-201ENST00000600169 1863 ntBASIC17.27■□□□□ 0.35
CLPTM1O96005 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC17.26■□□□□ 0.35
CLPTM1O96005 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
CLPTM1O96005 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLPTM1O96005 OR6D1P-203ENST00000641209 4860 ntBASIC17.26■□□□□ 0.35
CLPTM1O96005 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.26■□□□□ 0.35
CLPTM1O96005 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CLPTM1O96005 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC17.26■□□□□ 0.35
CLPTM1O96005 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLPTM1O96005 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLPTM1O96005 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLPTM1O96005 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLPTM1O96005 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLPTM1O96005 AL023806.1-201ENST00000603994 1649 ntBASIC17.26■□□□□ 0.35
CLPTM1O96005 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLPTM1O96005 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLPTM1O96005 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLPTM1O96005 EPHA10-201ENST00000319637 2050 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLPTM1O96005 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLPTM1O96005 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLPTM1O96005 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLPTM1O96005 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
CLPTM1O96005 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC17.26■□□□□ 0.35
CLPTM1O96005 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC17.26■□□□□ 0.35
CLPTM1O96005 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC17.26■□□□□ 0.35
CLPTM1O96005 UNC93B5-201ENST00000530315 699 ntBASIC17.26■□□□□ 0.35
CLPTM1O96005 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLPTM1O96005 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.26■□□□□ 0.35
CLPTM1O96005 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLPTM1O96005 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLPTM1O96005 LRRN4-201ENST00000378858 2692 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLPTM1O96005 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC17.26■□□□□ 0.35
CLPTM1O96005 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC17.26■□□□□ 0.35
CLPTM1O96005 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLPTM1O96005 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC17.26■□□□□ 0.35
CLPTM1O96005 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLPTM1O96005 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLPTM1O96005 TLCD2-201ENST00000330676 5971 ntAPPRIS P1 TSL 2 BASIC17.26■□□□□ 0.35
CLPTM1O96005 JMY-201ENST00000396137 9042 ntAPPRIS P1 TSL 5 BASIC17.26■□□□□ 0.35
CLPTM1O96005 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLPTM1O96005 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLPTM1O96005 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLPTM1O96005 PAX7-201ENST00000375375 2260 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLPTM1O96005 C16orf45-201ENST00000300006 2404 ntAPPRIS P1 TSL 1 (best) BASIC17.26■□□□□ 0.35
CLPTM1O96005 NPC1L1-203ENST00000423141 2554 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLPTM1O96005 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.26■□□□□ 0.35
CLPTM1O96005 PEX10-201ENST00000288774 2871 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLPTM1O96005 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC17.26■□□□□ 0.35
CLPTM1O96005 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC17.25■□□□□ 0.35
CLPTM1O96005 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC17.25■□□□□ 0.35
CLPTM1O96005 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLPTM1O96005 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLPTM1O96005 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC17.25■□□□□ 0.35
CLPTM1O96005 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLPTM1O96005 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLPTM1O96005 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLPTM1O96005 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.25■□□□□ 0.35
CLPTM1O96005 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.25■□□□□ 0.35
CLPTM1O96005 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLPTM1O96005 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC17.25■□□□□ 0.35
CLPTM1O96005 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC17.25■□□□□ 0.35
CLPTM1O96005 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC17.25■□□□□ 0.35
CLPTM1O96005 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC17.25■□□□□ 0.35
CLPTM1O96005 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC17.25■□□□□ 0.35
CLPTM1O96005 SLC29A4P2-201ENST00000504749 1089 ntBASIC17.25■□□□□ 0.35
CLPTM1O96005 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC17.25■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms