Protein–RNA interactions for Protein: O60716

CTNND1, Catenin delta-1, humanhuman

Known RBP Predictions only

Length 968 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1O60716 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CTNND1O60716 SULT2B1-201ENST00000201586 1295 ntAPPRIS P4 TSL 1 (best) BASIC21.32■■□□□ 1
CTNND1O60716 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC21.32■■□□□ 1
CTNND1O60716 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC21.32■■□□□ 1
CTNND1O60716 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC21.32■■□□□ 1
CTNND1O60716 AC093909.1-201ENST00000504731 1122 ntBASIC21.32■■□□□ 1
CTNND1O60716 MRPL49-206ENST00000531705 489 ntTSL 5 BASIC21.32■■□□□ 1
CTNND1O60716 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC21.32■■□□□ 1
CTNND1O60716 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC21.32■■□□□ 1
CTNND1O60716 GZMM-202ENST00000592501 941 ntTSL 3 BASIC21.32■■□□□ 1
CTNND1O60716 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC21.32■■□□□ 1
CTNND1O60716 AL138831.2-201ENST00000606564 490 ntBASIC21.32■■□□□ 1
CTNND1O60716 ABBA01031661.1-201ENST00000634362 1253 ntBASIC21.32■■□□□ 1
CTNND1O60716 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CTNND1O60716 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC21.32■■□□□ 1
CTNND1O60716 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CTNND1O60716 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CTNND1O60716 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC21.32■■□□□ 1
CTNND1O60716 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CTNND1O60716 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
CTNND1O60716 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC21.32■■□□□ 1
CTNND1O60716 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC21.32■■□□□ 1
CTNND1O60716 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
CTNND1O60716 IRF7-207ENST00000525445 1588 ntTSL 5 BASIC21.31■■□□□ 1
CTNND1O60716 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
CTNND1O60716 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC21.31■■□□□ 1
CTNND1O60716 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC21.31■■□□□ 1
CTNND1O60716 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
CTNND1O60716 CXorf58-201ENST00000379211 1752 ntAPPRIS P2 TSL 1 (best) BASIC21.31■■□□□ 1
CTNND1O60716 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CTNND1O60716 MED16-201ENST00000269814 1199 ntTSL 5 BASIC21.31■■□□□ 1
CTNND1O60716 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
CTNND1O60716 MEG3-211ENST00000452514 461 ntTSL 3 BASIC21.31■■□□□ 1
CTNND1O60716 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC21.31■■□□□ 1
CTNND1O60716 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
CTNND1O60716 FGFR3P6-201ENST00000457012 610 ntBASIC21.31■■□□□ 1
CTNND1O60716 RNPS1P1-201ENST00000507437 918 ntBASIC21.31■■□□□ 1
CTNND1O60716 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC21.31■■□□□ 1
CTNND1O60716 TRAF3IP2-AS1-208ENST00000525151 609 ntTSL 1 (best) BASIC21.31■■□□□ 1
CTNND1O60716 SLC25A1P1-201ENST00000528351 927 ntBASIC21.31■■□□□ 1
CTNND1O60716 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC21.31■■□□□ 1
CTNND1O60716 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC21.31■■□□□ 1
CTNND1O60716 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC21.31■■□□□ 1
CTNND1O60716 SLC35B2-207ENST00000619636 2063 ntTSL 1 (best) BASIC21.31■■□□□ 1
CTNND1O60716 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC21.31■■□□□ 1
CTNND1O60716 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC21.31■■□□□ 1
CTNND1O60716 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC21.31■■□□□ 1
CTNND1O60716 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
CTNND1O60716 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CTNND1O60716 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
CTNND1O60716 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC21.3■■□□□ 1
CTNND1O60716 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC21.3■■□□□ 1
CTNND1O60716 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC21.3■■□□□ 1
CTNND1O60716 INTS4P1-201ENST00000438455 1935 ntBASIC21.3■■□□□ 1
CTNND1O60716 EXOSC5-201ENST00000221233 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CTNND1O60716 NUDT6-201ENST00000304430 1169 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CTNND1O60716 HIST2H3DP1-201ENST00000401004 416 ntBASIC21.3■■□□□ 1
CTNND1O60716 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC21.3■■□□□ 1
CTNND1O60716 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC21.3■■□□□ 1
CTNND1O60716 PRR14-203ENST00000542965 2316 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
CTNND1O60716 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC21.3■■□□□ 1
CTNND1O60716 GOSR2-226ENST00000639287 2367 ntTSL 5 BASIC21.3■■□□□ 1
CTNND1O60716 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC21.3■■□□□ 1
CTNND1O60716 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC21.3■■□□□ 1
CTNND1O60716 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CTNND1O60716 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CTNND1O60716 HOXC10-201ENST00000303460 1936 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CTNND1O60716 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
CTNND1O60716 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC21.29■■□□□ 1
CTNND1O60716 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC21.29■■□□□ 1
CTNND1O60716 USP36-203ENST00000542802 6063 ntAPPRIS P2 TSL 1 (best) BASIC21.29■■□□□ 1
CTNND1O60716 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC21.29■■□□□ 1
CTNND1O60716 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC21.29■■□□□ 1
CTNND1O60716 ZRSR2-201ENST00000307771 1491 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
CTNND1O60716 PAN3-AS1-201ENST00000563843 1351 ntBASIC21.29■■□□□ 1
CTNND1O60716 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC21.29■■□□□ 1
CTNND1O60716 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC21.29■■□□□ 1
CTNND1O60716 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC21.29■■□□□ 1
CTNND1O60716 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC21.29■■□□□ 1
CTNND1O60716 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC21.29■■□□□ 1
CTNND1O60716 MTDHP3-201ENST00000594186 672 ntBASIC21.29■■□□□ 1
CTNND1O60716 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC21.29■■□□□ 1
CTNND1O60716 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC21.29■■□□□ 1
CTNND1O60716 AC125634.1-201ENST00000438758 1403 ntBASIC21.29■■□□□ 1
CTNND1O60716 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CTNND1O60716 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC21.28■■□□□ 1
CTNND1O60716 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC21.28■■□□□ 1
CTNND1O60716 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC21.28■■□□□ 1
CTNND1O60716 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CTNND1O60716 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.28■■□□□ 1
CTNND1O60716 AC005332.7-201ENST00000614046 2005 ntBASIC21.28■■□□□ 1
CTNND1O60716 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
CTNND1O60716 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC21.28■■□□□ 1
CTNND1O60716 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
CTNND1O60716 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC21.28■■□□□ 1
CTNND1O60716 SNCG-201ENST00000348795 684 ntTSL 2 BASIC21.28■■□□□ 1
CTNND1O60716 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC21.28■■□□□ 1
CTNND1O60716 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC21.28■■□□□ 1
CTNND1O60716 SCARNA2-201ENST00000458748 420 ntBASIC21.28■■□□□ 1
CTNND1O60716 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms