Protein–RNA interactions for Protein: A0A087WSZ9

TRAV30, T-cell receptor alpha variable 30 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV30A0A087WSZ9 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV30A0A087WSZ9 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV30A0A087WSZ9 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC14.41□□□□□ -0.1
TRAV30A0A087WSZ9 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV30A0A087WSZ9 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC14.41□□□□□ -0.1
TRAV30A0A087WSZ9 IAH1-202ENST00000470914 2137 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV30A0A087WSZ9 NOC2LP2-201ENST00000407594 1944 ntBASIC14.41□□□□□ -0.1
TRAV30A0A087WSZ9 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC14.41□□□□□ -0.1
TRAV30A0A087WSZ9 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV30A0A087WSZ9 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV30A0A087WSZ9 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
TRAV30A0A087WSZ9 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV30A0A087WSZ9 BACE1-201ENST00000313005 6326 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
TRAV30A0A087WSZ9 MYO1B-202ENST00000339514 5026 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV30A0A087WSZ9 NPRL3-201ENST00000399953 2784 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV30A0A087WSZ9 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV30A0A087WSZ9 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV30A0A087WSZ9 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV30A0A087WSZ9 AC124067.4-201ENST00000519691 2379 ntBASIC14.4□□□□□ -0.1
TRAV30A0A087WSZ9 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV30A0A087WSZ9 AC127496.1-202ENST00000573602 2091 ntTSL 2 BASIC14.4□□□□□ -0.1
TRAV30A0A087WSZ9 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV30A0A087WSZ9 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC14.4□□□□□ -0.1
TRAV30A0A087WSZ9 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV30A0A087WSZ9 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.1
TRAV30A0A087WSZ9 ABHD17AP1-201ENST00000358206 933 ntBASIC14.4□□□□□ -0.1
TRAV30A0A087WSZ9 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC14.4□□□□□ -0.1
TRAV30A0A087WSZ9 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV30A0A087WSZ9 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV30A0A087WSZ9 SLC25A6P5-201ENST00000435663 894 ntBASIC14.4□□□□□ -0.1
TRAV30A0A087WSZ9 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC14.4□□□□□ -0.1
TRAV30A0A087WSZ9 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC14.4□□□□□ -0.1
TRAV30A0A087WSZ9 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC14.4□□□□□ -0.1
TRAV30A0A087WSZ9 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC14.4□□□□□ -0.1
TRAV30A0A087WSZ9 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
TRAV30A0A087WSZ9 AC008622.2-201ENST00000617006 1229 ntBASIC14.4□□□□□ -0.1
TRAV30A0A087WSZ9 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC14.4□□□□□ -0.1
TRAV30A0A087WSZ9 CD248-201ENST00000311330 2558 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
TRAV30A0A087WSZ9 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC14.4□□□□□ -0.1
TRAV30A0A087WSZ9 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC14.4□□□□□ -0.1
TRAV30A0A087WSZ9 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV30A0A087WSZ9 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV30A0A087WSZ9 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV30A0A087WSZ9 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
TRAV30A0A087WSZ9 AL513477.1-201ENST00000602865 2407 ntBASIC14.4□□□□□ -0.1
TRAV30A0A087WSZ9 DAPK1-202ENST00000408954 5892 ntAPPRIS P1 TSL 2 BASIC14.4□□□□□ -0.11
TRAV30A0A087WSZ9 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV30A0A087WSZ9 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV30A0A087WSZ9 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC14.39□□□□□ -0.11
TRAV30A0A087WSZ9 NPEPL1-204ENST00000525967 1917 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV30A0A087WSZ9 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV30A0A087WSZ9 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
TRAV30A0A087WSZ9 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV30A0A087WSZ9 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC14.39□□□□□ -0.11
TRAV30A0A087WSZ9 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV30A0A087WSZ9 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV30A0A087WSZ9 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
TRAV30A0A087WSZ9 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC14.39□□□□□ -0.11
TRAV30A0A087WSZ9 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
TRAV30A0A087WSZ9 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV30A0A087WSZ9 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV30A0A087WSZ9 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC14.39□□□□□ -0.11
TRAV30A0A087WSZ9 MIR3180-5-201ENST00000583743 153 ntBASIC14.39□□□□□ -0.11
TRAV30A0A087WSZ9 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC14.39□□□□□ -0.11
TRAV30A0A087WSZ9 ZNF281-201ENST00000294740 4891 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV30A0A087WSZ9 HARBI1-201ENST00000326737 1967 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV30A0A087WSZ9 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC14.39□□□□□ -0.11
TRAV30A0A087WSZ9 PLK1-201ENST00000300093 2227 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV30A0A087WSZ9 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV30A0A087WSZ9 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
TRAV30A0A087WSZ9 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV30A0A087WSZ9 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
TRAV30A0A087WSZ9 KRT8P7-201ENST00000533003 1432 ntBASIC14.39□□□□□ -0.11
TRAV30A0A087WSZ9 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV30A0A087WSZ9 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC14.39□□□□□ -0.11
TRAV30A0A087WSZ9 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV30A0A087WSZ9 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV30A0A087WSZ9 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC14.39□□□□□ -0.11
TRAV30A0A087WSZ9 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
TRAV30A0A087WSZ9 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV30A0A087WSZ9 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC14.39□□□□□ -0.11
TRAV30A0A087WSZ9 STYXL1-208ENST00000451157 1570 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TRAV30A0A087WSZ9 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC14.38□□□□□ -0.11
TRAV30A0A087WSZ9 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV30A0A087WSZ9 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV30A0A087WSZ9 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
TRAV30A0A087WSZ9 NFATC4-202ENST00000413692 5700 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV30A0A087WSZ9 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV30A0A087WSZ9 TM2D2-201ENST00000397070 1631 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV30A0A087WSZ9 TBC1D3P2-202ENST00000577902 1649 ntBASIC14.38□□□□□ -0.11
TRAV30A0A087WSZ9 FAM214B-206ENST00000603301 3256 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV30A0A087WSZ9 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC14.38□□□□□ -0.11
TRAV30A0A087WSZ9 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV30A0A087WSZ9 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV30A0A087WSZ9 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV30A0A087WSZ9 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV30A0A087WSZ9 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC14.38□□□□□ -0.11
TRAV30A0A087WSZ9 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TRAV30A0A087WSZ9 SCRIB-202ENST00000356994 5218 ntAPPRIS P4 TSL 2 BASIC14.38□□□□□ -0.11
TRAV30A0A087WSZ9 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 98,524 protein–RNA pairs in 45 ms