Protein–RNA interactions for Protein: Q9UJQ4

SALL4, Sal-like protein 4, humanhuman

Predictions only

Length 1,053 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SALL4Q9UJQ4 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SALL4Q9UJQ4 MAML1-201ENST00000292599 5723 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SALL4Q9UJQ4 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC19.47■□□□□ 0.71
SALL4Q9UJQ4 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SALL4Q9UJQ4 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SALL4Q9UJQ4 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC19.47■□□□□ 0.71
SALL4Q9UJQ4 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SALL4Q9UJQ4 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
SALL4Q9UJQ4 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SALL4Q9UJQ4 SNCG-201ENST00000348795 684 ntTSL 2 BASIC19.47■□□□□ 0.71
SALL4Q9UJQ4 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
SALL4Q9UJQ4 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SALL4Q9UJQ4 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SALL4Q9UJQ4 METTL21A-206ENST00000432416 869 ntTSL 3 BASIC19.47■□□□□ 0.71
SALL4Q9UJQ4 MFAP1P1-201ENST00000442257 1255 ntBASIC19.47■□□□□ 0.71
SALL4Q9UJQ4 AL355355.2-201ENST00000442321 338 ntBASIC19.47■□□□□ 0.71
SALL4Q9UJQ4 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
SALL4Q9UJQ4 PHF11-218ENST00000496623 1173 ntAPPRIS ALT2 TSL 2 BASIC19.47■□□□□ 0.71
SALL4Q9UJQ4 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.47■□□□□ 0.71
SALL4Q9UJQ4 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC19.47■□□□□ 0.71
SALL4Q9UJQ4 AC133561.5-201ENST00000635547 218 ntBASIC19.47■□□□□ 0.71
SALL4Q9UJQ4 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SALL4Q9UJQ4 MRI1-201ENST00000040663 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SALL4Q9UJQ4 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.47■□□□□ 0.71
SALL4Q9UJQ4 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC19.47■□□□□ 0.71
SALL4Q9UJQ4 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC19.46■□□□□ 0.71
SALL4Q9UJQ4 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SALL4Q9UJQ4 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SALL4Q9UJQ4 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
SALL4Q9UJQ4 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
SALL4Q9UJQ4 AC010186.2-201ENST00000575094 2612 ntTSL 2 BASIC19.46■□□□□ 0.71
SALL4Q9UJQ4 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SALL4Q9UJQ4 GINM1-201ENST00000367419 2024 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SALL4Q9UJQ4 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC19.46■□□□□ 0.71
SALL4Q9UJQ4 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SALL4Q9UJQ4 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SALL4Q9UJQ4 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC19.46■□□□□ 0.71
SALL4Q9UJQ4 AC036111.1-201ENST00000533973 1582 ntBASIC19.46■□□□□ 0.71
SALL4Q9UJQ4 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC19.46■□□□□ 0.71
SALL4Q9UJQ4 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC19.46■□□□□ 0.71
SALL4Q9UJQ4 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SALL4Q9UJQ4 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SALL4Q9UJQ4 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SALL4Q9UJQ4 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.46■□□□□ 0.71
SALL4Q9UJQ4 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SALL4Q9UJQ4 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SALL4Q9UJQ4 AC116562.2-201ENST00000507042 360 ntBASIC19.46■□□□□ 0.71
SALL4Q9UJQ4 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SALL4Q9UJQ4 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC19.46■□□□□ 0.71
SALL4Q9UJQ4 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC19.46■□□□□ 0.71
SALL4Q9UJQ4 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
SALL4Q9UJQ4 GRAP-204ENST00000573099 846 ntTSL 3 BASIC19.46■□□□□ 0.71
SALL4Q9UJQ4 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SALL4Q9UJQ4 CD177P1-201ENST00000606252 935 ntBASIC19.46■□□□□ 0.71
SALL4Q9UJQ4 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC19.46■□□□□ 0.71
SALL4Q9UJQ4 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SALL4Q9UJQ4 PTGES-201ENST00000340607 1774 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SALL4Q9UJQ4 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC19.46■□□□□ 0.71
SALL4Q9UJQ4 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.46■□□□□ 0.71
SALL4Q9UJQ4 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
SALL4Q9UJQ4 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC19.46■□□□□ 0.71
SALL4Q9UJQ4 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.46■□□□□ 0.71
SALL4Q9UJQ4 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SALL4Q9UJQ4 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SALL4Q9UJQ4 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SALL4Q9UJQ4 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SALL4Q9UJQ4 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SALL4Q9UJQ4 AL163051.1-201ENST00000569214 1512 ntBASIC19.46■□□□□ 0.71
SALL4Q9UJQ4 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC19.45■□□□□ 0.7
SALL4Q9UJQ4 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.45■□□□□ 0.7
SALL4Q9UJQ4 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC19.45■□□□□ 0.7
SALL4Q9UJQ4 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
SALL4Q9UJQ4 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SALL4Q9UJQ4 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.45■□□□□ 0.7
SALL4Q9UJQ4 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
SALL4Q9UJQ4 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SALL4Q9UJQ4 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC19.45■□□□□ 0.7
SALL4Q9UJQ4 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.45■□□□□ 0.7
SALL4Q9UJQ4 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SALL4Q9UJQ4 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC19.45■□□□□ 0.7
SALL4Q9UJQ4 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.45■□□□□ 0.7
SALL4Q9UJQ4 FOSL1-204ENST00000532401 1132 ntTSL 2 BASIC19.45■□□□□ 0.7
SALL4Q9UJQ4 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.45■□□□□ 0.7
SALL4Q9UJQ4 AP003071.4-201ENST00000562276 1284 ntBASIC19.45■□□□□ 0.7
SALL4Q9UJQ4 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.45■□□□□ 0.7
SALL4Q9UJQ4 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.45■□□□□ 0.7
SALL4Q9UJQ4 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.45■□□□□ 0.7
SALL4Q9UJQ4 AC097493.4-201ENST00000641197 219 ntBASIC19.45■□□□□ 0.7
SALL4Q9UJQ4 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC19.45■□□□□ 0.7
SALL4Q9UJQ4 PCDHA12-202ENST00000613593 2588 ntBASIC19.45■□□□□ 0.7
SALL4Q9UJQ4 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SALL4Q9UJQ4 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC19.45■□□□□ 0.7
SALL4Q9UJQ4 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SALL4Q9UJQ4 AC004890.2-201ENST00000426347 2419 ntTSL 5 BASIC19.45■□□□□ 0.7
SALL4Q9UJQ4 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC19.45■□□□□ 0.7
SALL4Q9UJQ4 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC19.45■□□□□ 0.7
SALL4Q9UJQ4 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SALL4Q9UJQ4 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.45■□□□□ 0.7
SALL4Q9UJQ4 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SALL4Q9UJQ4 NME9-203ENST00000383180 2133 ntTSL 2 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms