Protein–RNA interactions for Protein: Q8VD57

Sft2d2, Vesicle transport protein SFT2B, mousemouse

Predictions only

Length 159 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sft2d2Q8VD57 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sft2d2Q8VD57 Bst1-201ENSMUST00000101237 2856 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sft2d2Q8VD57 Camk2b-205ENSMUST00000093355 1973 ntTSL 5 BASIC12.48□□□□□ -0.41
Sft2d2Q8VD57 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sft2d2Q8VD57 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sft2d2Q8VD57 Cchcr1-202ENSMUST00000164242 2656 ntAPPRIS P2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sft2d2Q8VD57 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sft2d2Q8VD57 Pam-201ENSMUST00000058762 4095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sft2d2Q8VD57 Gm43509-201ENSMUST00000196551 2594 ntBASIC12.48□□□□□ -0.41
Sft2d2Q8VD57 Mboat4-201ENSMUST00000095345 1836 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sft2d2Q8VD57 Papd5-203ENSMUST00000119033 4624 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sft2d2Q8VD57 Atp2a3-201ENSMUST00000021142 4593 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sft2d2Q8VD57 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC12.48□□□□□ -0.41
Sft2d2Q8VD57 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sft2d2Q8VD57 Gstm4-201ENSMUST00000029489 1707 ntAPPRIS P1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sft2d2Q8VD57 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sft2d2Q8VD57 Ilvbl-204ENSMUST00000218271 1606 ntTSL 1 (best) BASIC12.48□□□□□ -0.41
Sft2d2Q8VD57 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC12.48□□□□□ -0.41
Sft2d2Q8VD57 2810408A11Rik-204ENSMUST00000108621 1455 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Sft2d2Q8VD57 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sft2d2Q8VD57 Grwd1-202ENSMUST00000131384 1974 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sft2d2Q8VD57 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sft2d2Q8VD57 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC12.47□□□□□ -0.41
Sft2d2Q8VD57 Apol8-202ENSMUST00000089450 2498 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Sft2d2Q8VD57 Hcn3-201ENSMUST00000029686 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sft2d2Q8VD57 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC12.47□□□□□ -0.41
Sft2d2Q8VD57 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sft2d2Q8VD57 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC12.47□□□□□ -0.41
Sft2d2Q8VD57 Utf1-201ENSMUST00000168457 1227 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sft2d2Q8VD57 Stk11-210ENSMUST00000213772 1239 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sft2d2Q8VD57 4833428L15Rik-202ENSMUST00000215652 641 ntTSL 3 BASIC12.47□□□□□ -0.41
Sft2d2Q8VD57 Tceanc2-201ENSMUST00000030362 935 ntAPPRIS P1 TSL 3 BASIC12.47□□□□□ -0.41
Sft2d2Q8VD57 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC12.47□□□□□ -0.41
Sft2d2Q8VD57 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sft2d2Q8VD57 Ccdc88c-202ENSMUST00000085096 6313 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Sft2d2Q8VD57 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sft2d2Q8VD57 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sft2d2Q8VD57 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Sft2d2Q8VD57 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Sft2d2Q8VD57 Zfp628-201ENSMUST00000116354 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sft2d2Q8VD57 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sft2d2Q8VD57 Arl11-202ENSMUST00000224727 2095 ntAPPRIS P1 BASIC12.47□□□□□ -0.41
Sft2d2Q8VD57 Cndp2-201ENSMUST00000025546 2050 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sft2d2Q8VD57 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Sft2d2Q8VD57 Ccdc157-202ENSMUST00000101626 5153 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sft2d2Q8VD57 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sft2d2Q8VD57 Nupl1-207ENSMUST00000225311 2475 ntBASIC12.47□□□□□ -0.41
Sft2d2Q8VD57 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sft2d2Q8VD57 Srpx-201ENSMUST00000044789 2477 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sft2d2Q8VD57 Shd-201ENSMUST00000044216 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sft2d2Q8VD57 Ppp1r36-201ENSMUST00000063977 1515 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Sft2d2Q8VD57 Foxp1-208ENSMUST00000113329 1926 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Sft2d2Q8VD57 Acvrl1-204ENSMUST00000120028 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Sft2d2Q8VD57 Zbtb46-201ENSMUST00000029106 5309 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
Sft2d2Q8VD57 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sft2d2Q8VD57 Uba3-201ENSMUST00000089287 2257 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sft2d2Q8VD57 Lman2-201ENSMUST00000021940 4315 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sft2d2Q8VD57 Ncmap-204ENSMUST00000105859 1801 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sft2d2Q8VD57 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sft2d2Q8VD57 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC12.46□□□□□ -0.41
Sft2d2Q8VD57 Sfta3-ps-205ENSMUST00000220379 2187 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Sft2d2Q8VD57 Ccdc85a-201ENSMUST00000042534 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sft2d2Q8VD57 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Sft2d2Q8VD57 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sft2d2Q8VD57 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sft2d2Q8VD57 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC12.46□□□□□ -0.41
Sft2d2Q8VD57 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sft2d2Q8VD57 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sft2d2Q8VD57 Svbp-203ENSMUST00000106345 684 ntTSL 2 BASIC12.46□□□□□ -0.41
Sft2d2Q8VD57 4930413G21Rik-201ENSMUST00000205998 993 ntBASIC12.46□□□□□ -0.41
Sft2d2Q8VD57 Gm7791-201ENSMUST00000219066 539 ntBASIC12.46□□□□□ -0.41
Sft2d2Q8VD57 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sft2d2Q8VD57 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sft2d2Q8VD57 Prdx5-201ENSMUST00000025904 1262 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sft2d2Q8VD57 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Sft2d2Q8VD57 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Sft2d2Q8VD57 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.41
Sft2d2Q8VD57 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sft2d2Q8VD57 Chrna2-202ENSMUST00000206455 1933 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Sft2d2Q8VD57 Scube1-201ENSMUST00000016907 3991 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sft2d2Q8VD57 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
Sft2d2Q8VD57 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sft2d2Q8VD57 Gm15442-201ENSMUST00000117905 1527 ntBASIC12.46□□□□□ -0.42
Sft2d2Q8VD57 Sphk1-211ENSMUST00000141798 1532 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sft2d2Q8VD57 Gm42743-201ENSMUST00000051089 1511 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Sft2d2Q8VD57 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC12.46□□□□□ -0.42
Sft2d2Q8VD57 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC12.46□□□□□ -0.42
Sft2d2Q8VD57 Uchl5-201ENSMUST00000018333 1845 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sft2d2Q8VD57 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC12.46□□□□□ -0.42
Sft2d2Q8VD57 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sft2d2Q8VD57 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sft2d2Q8VD57 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sft2d2Q8VD57 Fgd1-201ENSMUST00000026296 4001 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Sft2d2Q8VD57 D430041D05Rik-201ENSMUST00000089726 10124 ntAPPRIS P1 TSL 5 BASIC12.46□□□□□ -0.42
Sft2d2Q8VD57 Ldlrap1-201ENSMUST00000037828 6549 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sft2d2Q8VD57 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sft2d2Q8VD57 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sft2d2Q8VD57 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sft2d2Q8VD57 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Sft2d2Q8VD57 Ccnj-201ENSMUST00000025983 3819 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 29.2 ms