Protein–RNA interactions for Protein: Q86Y39

NDUFA11, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex subunit 11, humanhuman

Predictions only

Length 141 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA11Q86Y39 HYI-201ENST00000372425 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NDUFA11Q86Y39 MPIG6B-202ENST00000375805 668 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
NDUFA11Q86Y39 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC14.19□□□□□ -0.14
NDUFA11Q86Y39 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
NDUFA11Q86Y39 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NDUFA11Q86Y39 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NDUFA11Q86Y39 DDT-203ENST00000403754 569 ntTSL 3 BASIC14.19□□□□□ -0.14
NDUFA11Q86Y39 DDT-206ENST00000430101 573 ntTSL 2 BASIC14.19□□□□□ -0.14
NDUFA11Q86Y39 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC14.19□□□□□ -0.14
NDUFA11Q86Y39 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC14.19□□□□□ -0.14
NDUFA11Q86Y39 RN7SL606P-201ENST00000472779 293 ntBASIC14.19□□□□□ -0.14
NDUFA11Q86Y39 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC14.19□□□□□ -0.14
NDUFA11Q86Y39 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NDUFA11Q86Y39 ABR-204ENST00000543210 1049 ntTSL 2 BASIC14.19□□□□□ -0.14
NDUFA11Q86Y39 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC14.19□□□□□ -0.14
NDUFA11Q86Y39 BMF-207ENST00000559701 630 ntTSL 3 BASIC14.19□□□□□ -0.14
NDUFA11Q86Y39 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
NDUFA11Q86Y39 ABR-217ENST00000572441 563 ntTSL 4 BASIC14.19□□□□□ -0.14
NDUFA11Q86Y39 AC011840.4-201ENST00000578471 627 ntBASIC14.19□□□□□ -0.14
NDUFA11Q86Y39 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC14.19□□□□□ -0.14
NDUFA11Q86Y39 AL353801.3-201ENST00000609898 542 ntBASIC14.19□□□□□ -0.14
NDUFA11Q86Y39 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC14.19□□□□□ -0.14
NDUFA11Q86Y39 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC14.19□□□□□ -0.14
NDUFA11Q86Y39 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC14.19□□□□□ -0.14
NDUFA11Q86Y39 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NDUFA11Q86Y39 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC14.19□□□□□ -0.14
NDUFA11Q86Y39 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
NDUFA11Q86Y39 CD8A-202ENST00000352580 1977 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
NDUFA11Q86Y39 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NDUFA11Q86Y39 AL357033.4-201ENST00000617703 1807 ntBASIC14.19□□□□□ -0.14
NDUFA11Q86Y39 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC14.19□□□□□ -0.14
NDUFA11Q86Y39 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
NDUFA11Q86Y39 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NDUFA11Q86Y39 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NDUFA11Q86Y39 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC14.19□□□□□ -0.14
NDUFA11Q86Y39 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
NDUFA11Q86Y39 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
NDUFA11Q86Y39 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
NDUFA11Q86Y39 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
NDUFA11Q86Y39 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
NDUFA11Q86Y39 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFA11Q86Y39 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFA11Q86Y39 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
NDUFA11Q86Y39 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFA11Q86Y39 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFA11Q86Y39 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFA11Q86Y39 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFA11Q86Y39 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC14.18□□□□□ -0.14
NDUFA11Q86Y39 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFA11Q86Y39 CD320-201ENST00000301458 1250 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFA11Q86Y39 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFA11Q86Y39 DFFB-203ENST00000341385 572 ntTSL 5 BASIC14.18□□□□□ -0.14
NDUFA11Q86Y39 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFA11Q86Y39 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFA11Q86Y39 S100A3-201ENST00000368712 579 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
NDUFA11Q86Y39 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC14.18□□□□□ -0.14
NDUFA11Q86Y39 IGHV3-47-201ENST00000425060 335 ntBASIC14.18□□□□□ -0.14
NDUFA11Q86Y39 KRT16P4-201ENST00000453883 522 ntBASIC14.18□□□□□ -0.14
NDUFA11Q86Y39 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFA11Q86Y39 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC14.18□□□□□ -0.14
NDUFA11Q86Y39 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC14.18□□□□□ -0.14
NDUFA11Q86Y39 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC14.18□□□□□ -0.14
NDUFA11Q86Y39 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC14.18□□□□□ -0.14
NDUFA11Q86Y39 AL662844.1-201ENST00000546340 181 ntBASIC14.18□□□□□ -0.14
NDUFA11Q86Y39 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC14.18□□□□□ -0.14
NDUFA11Q86Y39 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC14.18□□□□□ -0.14
NDUFA11Q86Y39 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC14.18□□□□□ -0.14
NDUFA11Q86Y39 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFA11Q86Y39 POLI-202ENST00000406285 2030 ntTSL 2 BASIC14.18□□□□□ -0.14
NDUFA11Q86Y39 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFA11Q86Y39 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFA11Q86Y39 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFA11Q86Y39 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC14.18□□□□□ -0.14
NDUFA11Q86Y39 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFA11Q86Y39 NETO1-207ENST00000583169 2357 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFA11Q86Y39 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFA11Q86Y39 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFA11Q86Y39 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC14.18□□□□□ -0.14
NDUFA11Q86Y39 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFA11Q86Y39 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFA11Q86Y39 C7orf49-202ENST00000424142 1738 ntTSL 2 BASIC14.18□□□□□ -0.14
NDUFA11Q86Y39 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFA11Q86Y39 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFA11Q86Y39 RNF135-205ENST00000535306 2098 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
NDUFA11Q86Y39 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NDUFA11Q86Y39 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC14.17□□□□□ -0.14
NDUFA11Q86Y39 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
NDUFA11Q86Y39 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NDUFA11Q86Y39 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC14.17□□□□□ -0.14
NDUFA11Q86Y39 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NDUFA11Q86Y39 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC14.17□□□□□ -0.14
NDUFA11Q86Y39 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC14.17□□□□□ -0.14
NDUFA11Q86Y39 PHF12-202ENST00000332830 4759 ntAPPRIS P1 TSL 2 BASIC14.17□□□□□ -0.14
NDUFA11Q86Y39 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
NDUFA11Q86Y39 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC14.17□□□□□ -0.14
NDUFA11Q86Y39 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NDUFA11Q86Y39 AL163051.1-201ENST00000569214 1512 ntBASIC14.17□□□□□ -0.14
NDUFA11Q86Y39 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
NDUFA11Q86Y39 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
NDUFA11Q86Y39 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC14.17□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 43.6 ms