Protein–RNA interactions for Protein: Q38HM4

Trim63, E3 ubiquitin-protein ligase TRIM63, mousemouse

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim63Q38HM4 Gm43570-201ENSMUST00000199951 3688 ntBASIC12.76□□□□□ -0.37
Trim63Q38HM4 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim63Q38HM4 Mkrn3-201ENSMUST00000094340 2547 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Trim63Q38HM4 C530008M17Rik-205ENSMUST00000121851 1165 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim63Q38HM4 Zcrb1-208ENSMUST00000162160 850 ntAPPRIS ALT1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim63Q38HM4 Gsc-201ENSMUST00000021513 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim63Q38HM4 Snrpd3-203ENSMUST00000220229 442 ntTSL 3 BASIC12.76□□□□□ -0.37
Trim63Q38HM4 Mt2-201ENSMUST00000034214 511 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim63Q38HM4 Gnb5-201ENSMUST00000076889 1188 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim63Q38HM4 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
Trim63Q38HM4 Bbs7-203ENSMUST00000108156 2687 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim63Q38HM4 Gtf2i-206ENSMUST00000172715 4114 ntTSL 5 BASIC12.76□□□□□ -0.37
Trim63Q38HM4 Ccdc88c-201ENSMUST00000068411 7542 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim63Q38HM4 Fbxl12-205ENSMUST00000140702 1555 ntBASIC12.76□□□□□ -0.37
Trim63Q38HM4 Nudcd2-201ENSMUST00000020578 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim63Q38HM4 Ahi1-201ENSMUST00000105525 4851 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim63Q38HM4 Mapk7-202ENSMUST00000101085 3254 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim63Q38HM4 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC12.76□□□□□ -0.37
Trim63Q38HM4 Tmem175-204ENSMUST00000146207 1686 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trim63Q38HM4 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim63Q38HM4 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim63Q38HM4 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim63Q38HM4 Cwc27-201ENSMUST00000022228 2071 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim63Q38HM4 Fzd1-201ENSMUST00000054294 4197 ntAPPRIS P1 BASIC12.76□□□□□ -0.37
Trim63Q38HM4 Hdgfl2-201ENSMUST00000002911 2264 ntAPPRIS ALT2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim63Q38HM4 Gm12500-202ENSMUST00000186471 2428 ntBASIC12.76□□□□□ -0.37
Trim63Q38HM4 Hipk3-201ENSMUST00000028600 7454 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim63Q38HM4 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trim63Q38HM4 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim63Q38HM4 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim63Q38HM4 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim63Q38HM4 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC12.75□□□□□ -0.37
Trim63Q38HM4 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim63Q38HM4 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC12.75□□□□□ -0.37
Trim63Q38HM4 Gpd2-207ENSMUST00000169687 5745 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim63Q38HM4 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim63Q38HM4 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim63Q38HM4 Srsf1-202ENSMUST00000107920 1209 ntTSL 5 BASIC12.75□□□□□ -0.37
Trim63Q38HM4 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim63Q38HM4 Spock3-202ENSMUST00000117377 3066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim63Q38HM4 Mpc1-208ENSMUST00000155364 958 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Trim63Q38HM4 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim63Q38HM4 Naxd-202ENSMUST00000177955 1307 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim63Q38HM4 Dnajb2-206ENSMUST00000187058 1732 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim63Q38HM4 Gpx1-202ENSMUST00000191997 787 ntTSL 2 BASIC12.75□□□□□ -0.37
Trim63Q38HM4 Nacc1-201ENSMUST00000001975 4300 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim63Q38HM4 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim63Q38HM4 N4bp2os-203ENSMUST00000202673 699 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim63Q38HM4 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC12.75□□□□□ -0.37
Trim63Q38HM4 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim63Q38HM4 Ctf1-201ENSMUST00000047393 1352 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim63Q38HM4 Acy3-201ENSMUST00000054030 1505 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim63Q38HM4 Vcpip1-201ENSMUST00000057438 9749 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim63Q38HM4 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim63Q38HM4 Agfg1-201ENSMUST00000063380 2896 ntTSL 1 (best) BASIC12.75□□□□□ -0.37
Trim63Q38HM4 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC12.75□□□□□ -0.37
Trim63Q38HM4 Twist2-201ENSMUST00000007949 1329 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim63Q38HM4 Gpx1-201ENSMUST00000082429 1072 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim63Q38HM4 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC12.75□□□□□ -0.37
Trim63Q38HM4 Gse1-201ENSMUST00000034279 7127 ntAPPRIS P4 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim63Q38HM4 Scarb2-201ENSMUST00000031377 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim63Q38HM4 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.75□□□□□ -0.37
Trim63Q38HM4 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim63Q38HM4 Endou-201ENSMUST00000023105 2404 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim63Q38HM4 Zyg11a-203ENSMUST00000223127 2283 ntAPPRIS ALT2 TSL 5 BASIC12.74□□□□□ -0.37
Trim63Q38HM4 Irs4-201ENSMUST00000067841 6294 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim63Q38HM4 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC12.74□□□□□ -0.37
Trim63Q38HM4 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC12.74□□□□□ -0.37
Trim63Q38HM4 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim63Q38HM4 Dok1-201ENSMUST00000089651 1807 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim63Q38HM4 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim63Q38HM4 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim63Q38HM4 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim63Q38HM4 AC161052.2-201ENSMUST00000220969 1375 ntTSL 5 BASIC12.74□□□□□ -0.37
Trim63Q38HM4 Bbs10-201ENSMUST00000040454 2744 ntAPPRIS P1 TSL 2 BASIC12.74□□□□□ -0.37
Trim63Q38HM4 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC12.74□□□□□ -0.37
Trim63Q38HM4 Ly6h-204ENSMUST00000127095 1336 ntAPPRIS P3 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim63Q38HM4 Gm12922-201ENSMUST00000120626 809 ntBASIC12.74□□□□□ -0.37
Trim63Q38HM4 Gm20522-201ENSMUST00000173576 784 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim63Q38HM4 Gm38285-201ENSMUST00000192928 922 ntBASIC12.74□□□□□ -0.37
Trim63Q38HM4 0610010K14Rik-202ENSMUST00000021181 779 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim63Q38HM4 AC117245.1-201ENSMUST00000215481 566 ntTSL 3 BASIC12.74□□□□□ -0.37
Trim63Q38HM4 AC138214.1-201ENSMUST00000223838 420 ntAPPRIS P1 BASIC12.74□□□□□ -0.37
Trim63Q38HM4 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim63Q38HM4 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim63Q38HM4 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC12.74□□□□□ -0.37
Trim63Q38HM4 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim63Q38HM4 Sema6c-202ENSMUST00000090823 4029 ntAPPRIS ALT2 TSL 1 (best) BASIC12.74□□□□□ -0.37
Trim63Q38HM4 Dido1-207ENSMUST00000130986 4898 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim63Q38HM4 Eya1-203ENSMUST00000168081 4366 ntTSL 1 (best) BASIC12.74□□□□□ -0.37
Trim63Q38HM4 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC12.73□□□□□ -0.37
Trim63Q38HM4 Kcnj12-201ENSMUST00000041944 2459 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim63Q38HM4 Arcn1-201ENSMUST00000034607 4072 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim63Q38HM4 2810408A11Rik-203ENSMUST00000102580 1640 ntAPPRIS P3 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim63Q38HM4 Cant1-205ENSMUST00000106289 1600 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim63Q38HM4 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC12.73□□□□□ -0.37
Trim63Q38HM4 Ttc16-202ENSMUST00000091059 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim63Q38HM4 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC12.73□□□□□ -0.37
Trim63Q38HM4 Vcl-201ENSMUST00000022369 5267 ntAPPRIS P1 TSL 1 (best) BASIC12.73□□□□□ -0.37
Trim63Q38HM4 Glis3-209ENSMUST00000162022 7514 ntAPPRIS P2 TSL 1 (best) BASIC12.73□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms