Protein–RNA interactions for Protein: P22894

MMP8, Neutrophil collagenase, humanhuman

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MMP8P22894 COX11P1-201ENST00000489116 835 ntBASIC19.27■□□□□ 0.68
MMP8P22894 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC19.27■□□□□ 0.68
MMP8P22894 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.27■□□□□ 0.68
MMP8P22894 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC19.27■□□□□ 0.68
MMP8P22894 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
MMP8P22894 C16orf74-206ENST00000602766 832 ntAPPRIS ALT2 TSL 3 BASIC19.27■□□□□ 0.68
MMP8P22894 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC19.27■□□□□ 0.68
MMP8P22894 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
MMP8P22894 AL031432.5-201ENST00000641059 760 ntBASIC19.27■□□□□ 0.68
MMP8P22894 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
MMP8P22894 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
MMP8P22894 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC19.27■□□□□ 0.68
MMP8P22894 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC19.27■□□□□ 0.68
MMP8P22894 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.27■□□□□ 0.67
MMP8P22894 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
MMP8P22894 SP100-208ENST00000427101 1922 ntTSL 2 BASIC19.27■□□□□ 0.67
MMP8P22894 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC19.27■□□□□ 0.67
MMP8P22894 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
MMP8P22894 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
MMP8P22894 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
MMP8P22894 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC19.27■□□□□ 0.67
MMP8P22894 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.67
MMP8P22894 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
MMP8P22894 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
MMP8P22894 FBXO31-201ENST00000311635 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MMP8P22894 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
MMP8P22894 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MMP8P22894 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MMP8P22894 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MMP8P22894 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
MMP8P22894 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MMP8P22894 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MMP8P22894 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MMP8P22894 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.26■□□□□ 0.67
MMP8P22894 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MMP8P22894 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.26■□□□□ 0.67
MMP8P22894 BX664615.1-201ENST00000443558 458 ntBASIC19.26■□□□□ 0.67
MMP8P22894 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.26■□□□□ 0.67
MMP8P22894 AL441883.1-201ENST00000566170 1045 ntBASIC19.26■□□□□ 0.67
MMP8P22894 ZNF133-211ENST00000538547 2245 ntTSL 2 BASIC19.26■□□□□ 0.67
MMP8P22894 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.26■□□□□ 0.67
MMP8P22894 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.26■□□□□ 0.67
MMP8P22894 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.26■□□□□ 0.67
MMP8P22894 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
MMP8P22894 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MMP8P22894 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC19.26■□□□□ 0.67
MMP8P22894 AC008764.6-201ENST00000595909 2069 ntBASIC19.26■□□□□ 0.67
MMP8P22894 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MMP8P22894 TFEB-206ENST00000403298 2162 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
MMP8P22894 PARP16-202ENST00000444347 2352 ntTSL 2 BASIC19.26■□□□□ 0.67
MMP8P22894 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC19.26■□□□□ 0.67
MMP8P22894 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.26■□□□□ 0.67
MMP8P22894 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.26■□□□□ 0.67
MMP8P22894 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MMP8P22894 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
MMP8P22894 LRRC25-201ENST00000339007 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MMP8P22894 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MMP8P22894 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
MMP8P22894 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MMP8P22894 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MMP8P22894 DTX2-211ENST00000446600 2281 ntTSL 2 BASIC19.25■□□□□ 0.67
MMP8P22894 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
MMP8P22894 PBK-203ENST00000522944 1499 ntTSL 2 BASIC19.25■□□□□ 0.67
MMP8P22894 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MMP8P22894 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MMP8P22894 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MMP8P22894 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MMP8P22894 AC005521.1-201ENST00000393351 872 ntBASIC19.25■□□□□ 0.67
MMP8P22894 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC19.25■□□□□ 0.67
MMP8P22894 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.25■□□□□ 0.67
MMP8P22894 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MMP8P22894 AC034232.1-201ENST00000506026 1064 ntBASIC19.25■□□□□ 0.67
MMP8P22894 TMEM9B-AS1-201ENST00000525484 1053 ntTSL 5 BASIC19.25■□□□□ 0.67
MMP8P22894 AC140113.3-201ENST00000605663 199 ntBASIC19.25■□□□□ 0.67
MMP8P22894 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MMP8P22894 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
MMP8P22894 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
MMP8P22894 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MMP8P22894 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
MMP8P22894 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MMP8P22894 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC19.25■□□□□ 0.67
MMP8P22894 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MMP8P22894 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC19.25■□□□□ 0.67
MMP8P22894 AC068880.1-201ENST00000507289 2297 ntBASIC19.25■□□□□ 0.67
MMP8P22894 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
MMP8P22894 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
MMP8P22894 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.24■□□□□ 0.67
MMP8P22894 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC19.24■□□□□ 0.67
MMP8P22894 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC19.24■□□□□ 0.67
MMP8P22894 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC19.24■□□□□ 0.67
MMP8P22894 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC19.24■□□□□ 0.67
MMP8P22894 ANKRD20A18P-201ENST00000359341 492 ntBASIC19.24■□□□□ 0.67
MMP8P22894 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
MMP8P22894 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC19.24■□□□□ 0.67
MMP8P22894 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC19.24■□□□□ 0.67
MMP8P22894 TK2-213ENST00000563369 882 ntTSL 5 BASIC19.24■□□□□ 0.67
MMP8P22894 LINC01023-201ENST00000606054 436 ntBASIC19.24■□□□□ 0.67
MMP8P22894 AC011558.1-201ENST00000623459 338 ntBASIC19.24■□□□□ 0.67
MMP8P22894 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC19.24■□□□□ 0.67
MMP8P22894 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 54.2 ms