Protein–RNA interactions for Protein: P01127

PDGFB, Platelet-derived growth factor subunit B, humanhuman

Predicted RBP Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFBP01127 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PDGFBP01127 TMC6-212ENST00000589553 2389 ntTSL 2 BASIC18.34■□□□□ 0.53
PDGFBP01127 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDGFBP01127 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PDGFBP01127 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDGFBP01127 AC002310.6-201ENST00000624451 1377 ntBASIC18.34■□□□□ 0.53
PDGFBP01127 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDGFBP01127 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDGFBP01127 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDGFBP01127 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
PDGFBP01127 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.34■□□□□ 0.53
PDGFBP01127 AC073621.1-201ENST00000392730 636 ntBASIC18.34■□□□□ 0.53
PDGFBP01127 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PDGFBP01127 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PDGFBP01127 KRT18P27-201ENST00000427733 1299 ntBASIC18.34■□□□□ 0.53
PDGFBP01127 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC18.34■□□□□ 0.53
PDGFBP01127 FAM118B-206ENST00000529731 1028 ntTSL 5 BASIC18.34■□□□□ 0.53
PDGFBP01127 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC18.34■□□□□ 0.53
PDGFBP01127 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC18.34■□□□□ 0.53
PDGFBP01127 AC018845.2-201ENST00000568326 409 ntBASIC18.34■□□□□ 0.53
PDGFBP01127 CDC42EP4-206ENST00000581014 737 ntTSL 5 BASIC18.34■□□□□ 0.53
PDGFBP01127 AC068594.1-203ENST00000581153 695 ntTSL 2 BASIC18.34■□□□□ 0.53
PDGFBP01127 SDCCAG3P1-201ENST00000589292 1150 ntBASIC18.34■□□□□ 0.53
PDGFBP01127 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC18.34■□□□□ 0.53
PDGFBP01127 LCN8-205ENST00000612714 638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDGFBP01127 C20orf181-201ENST00000623918 480 ntBASIC18.34■□□□□ 0.53
PDGFBP01127 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PDGFBP01127 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.34■□□□□ 0.53
PDGFBP01127 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC18.34■□□□□ 0.53
PDGFBP01127 AC112907.3-201ENST00000577781 2400 ntBASIC18.34■□□□□ 0.53
PDGFBP01127 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDGFBP01127 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
PDGFBP01127 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDGFBP01127 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDGFBP01127 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
PDGFBP01127 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
PDGFBP01127 TULP1-208ENST00000614066 2084 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
PDGFBP01127 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC18.33■□□□□ 0.53
PDGFBP01127 SSH3-202ENST00000308298 2046 ntTSL 2 BASIC18.33■□□□□ 0.53
PDGFBP01127 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.33■□□□□ 0.53
PDGFBP01127 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.53
PDGFBP01127 MGAT3-201ENST00000341184 5062 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
PDGFBP01127 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.33■□□□□ 0.53
PDGFBP01127 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.53
PDGFBP01127 NSUN5P2-201ENST00000388955 1789 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
PDGFBP01127 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PDGFBP01127 MCL1-201ENST00000307940 1110 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PDGFBP01127 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PDGFBP01127 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC18.33■□□□□ 0.52
PDGFBP01127 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PDGFBP01127 WWOX-204ENST00000408984 1227 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PDGFBP01127 CEND1P1-201ENST00000451006 455 ntBASIC18.33■□□□□ 0.52
PDGFBP01127 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC18.33■□□□□ 0.52
PDGFBP01127 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC18.33■□□□□ 0.52
PDGFBP01127 MRVI1-AS1-203ENST00000529979 784 ntTSL 3 BASIC18.33■□□□□ 0.52
PDGFBP01127 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
PDGFBP01127 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC18.33■□□□□ 0.52
PDGFBP01127 IFT20-209ENST00000579419 787 ntAPPRIS ALT1 TSL 3 BASIC18.33■□□□□ 0.52
PDGFBP01127 AL513190.1-201ENST00000621254 727 ntBASIC18.33■□□□□ 0.52
PDGFBP01127 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDGFBP01127 TICAM1-202ENST00000621756 1650 ntTSL 5 BASIC18.33■□□□□ 0.52
PDGFBP01127 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDGFBP01127 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDGFBP01127 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDGFBP01127 FUT5-202ENST00000588525 1988 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDGFBP01127 KLK5-201ENST00000336334 1563 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
PDGFBP01127 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
PDGFBP01127 MGEA5-205ENST00000439817 5043 ntTSL 5 BASIC18.33■□□□□ 0.52
PDGFBP01127 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC18.33■□□□□ 0.52
PDGFBP01127 SARDH-203ENST00000371868 2266 ntTSL 2 BASIC18.33■□□□□ 0.52
PDGFBP01127 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDGFBP01127 SLC35A3-208ENST00000638336 2438 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PDGFBP01127 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDGFBP01127 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
PDGFBP01127 TP53RK-201ENST00000372102 2012 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PDGFBP01127 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC18.32■□□□□ 0.52
PDGFBP01127 RWDD3-201ENST00000263893 1078 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PDGFBP01127 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDGFBP01127 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
PDGFBP01127 AC018685.2-201ENST00000414065 547 ntTSL 4 BASIC18.32■□□□□ 0.52
PDGFBP01127 ATP6V0CP3-201ENST00000417255 467 ntBASIC18.32■□□□□ 0.52
PDGFBP01127 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDGFBP01127 AC092384.3-201ENST00000561980 531 ntTSL 4 BASIC18.32■□□□□ 0.52
PDGFBP01127 AC087741.1-203ENST00000576824 820 ntTSL 3 BASIC18.32■□□□□ 0.52
PDGFBP01127 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC18.32■□□□□ 0.52
PDGFBP01127 AL096865.1-201ENST00000606796 927 ntBASIC18.32■□□□□ 0.52
PDGFBP01127 AC009154.2-201ENST00000621177 724 ntBASIC18.32■□□□□ 0.52
PDGFBP01127 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC18.32■□□□□ 0.52
PDGFBP01127 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.32■□□□□ 0.52
PDGFBP01127 IRX4-206ENST00000513692 2391 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
PDGFBP01127 CRELD1-206ENST00000452070 1778 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
PDGFBP01127 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
PDGFBP01127 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDGFBP01127 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
PDGFBP01127 PMPCA-201ENST00000371717 2174 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDGFBP01127 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
PDGFBP01127 GABARAPL3-202ENST00000624044 1851 ntBASIC18.31■□□□□ 0.52
PDGFBP01127 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC18.31■□□□□ 0.52
PDGFBP01127 AC004817.3-201ENST00000602957 2129 ntBASIC18.31■□□□□ 0.52
PDGFBP01127 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.31■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 26.5 ms