Protein–RNA interactions for Protein: A0A075B6B9

Trav6d-5, T cell receptor alpha variable 6D-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6d-5A0A075B6B9 Zpbp2-205ENSMUST00000107513 1240 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
Trav6d-5A0A075B6B9 Gm14722-201ENSMUST00000118943 689 ntBASIC12.47□□□□□ -0.41
Trav6d-5A0A075B6B9 Bcl7c-205ENSMUST00000205977 891 ntTSL 2 BASIC12.47□□□□□ -0.41
Trav6d-5A0A075B6B9 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6d-5A0A075B6B9 Btg1-202ENSMUST00000218953 668 ntTSL 2 BASIC12.47□□□□□ -0.41
Trav6d-5A0A075B6B9 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC12.47□□□□□ -0.41
Trav6d-5A0A075B6B9 Fam92a-201ENSMUST00000087052 1292 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6d-5A0A075B6B9 Hic2-202ENSMUST00000115698 2765 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6d-5A0A075B6B9 Dlx6-202ENSMUST00000160937 2216 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6d-5A0A075B6B9 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6d-5A0A075B6B9 Anks1-203ENSMUST00000114842 5610 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6d-5A0A075B6B9 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6d-5A0A075B6B9 Gldn-201ENSMUST00000056740 4658 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
Trav6d-5A0A075B6B9 Slc18b1-206ENSMUST00000179321 2843 ntTSL 5 BASIC12.47□□□□□ -0.41
Trav6d-5A0A075B6B9 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6d-5A0A075B6B9 Sapcd2-201ENSMUST00000028329 3121 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6d-5A0A075B6B9 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6d-5A0A075B6B9 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6d-5A0A075B6B9 Nde1-201ENSMUST00000023359 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6d-5A0A075B6B9 Rnf38-202ENSMUST00000098098 5061 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6d-5A0A075B6B9 Pth1r-204ENSMUST00000198865 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6d-5A0A075B6B9 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
Trav6d-5A0A075B6B9 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6d-5A0A075B6B9 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6d-5A0A075B6B9 Lrp11-201ENSMUST00000019931 3386 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6d-5A0A075B6B9 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6d-5A0A075B6B9 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6d-5A0A075B6B9 Coasy-201ENSMUST00000001806 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6d-5A0A075B6B9 Vldlr-202ENSMUST00000047645 3260 ntTSL 5 BASIC12.46□□□□□ -0.41
Trav6d-5A0A075B6B9 Pde4d-204ENSMUST00000117879 1724 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6d-5A0A075B6B9 Gm38318-201ENSMUST00000195769 1706 ntBASIC12.46□□□□□ -0.41
Trav6d-5A0A075B6B9 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6d-5A0A075B6B9 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6d-5A0A075B6B9 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6d-5A0A075B6B9 Furin-203ENSMUST00000122232 4286 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6d-5A0A075B6B9 Sap18-203ENSMUST00000111269 459 ntTSL 2 BASIC12.46□□□□□ -0.41
Trav6d-5A0A075B6B9 Gm13168-201ENSMUST00000121771 632 ntBASIC12.46□□□□□ -0.41
Trav6d-5A0A075B6B9 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC12.46□□□□□ -0.41
Trav6d-5A0A075B6B9 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC12.46□□□□□ -0.41
Trav6d-5A0A075B6B9 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Trav6d-5A0A075B6B9 Gm37722-201ENSMUST00000193757 208 ntBASIC12.46□□□□□ -0.41
Trav6d-5A0A075B6B9 Rln3-201ENSMUST00000061923 634 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6d-5A0A075B6B9 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC12.46□□□□□ -0.41
Trav6d-5A0A075B6B9 Ppt1-202ENSMUST00000097902 1191 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6d-5A0A075B6B9 Gm14780-201ENSMUST00000118387 2737 ntBASIC12.46□□□□□ -0.41
Trav6d-5A0A075B6B9 Ccdc68-201ENSMUST00000043929 1618 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6d-5A0A075B6B9 Tigd5-201ENSMUST00000192937 4801 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Trav6d-5A0A075B6B9 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
Trav6d-5A0A075B6B9 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav6d-5A0A075B6B9 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC12.46□□□□□ -0.42
Trav6d-5A0A075B6B9 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav6d-5A0A075B6B9 Chd3-201ENSMUST00000092971 6066 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Trav6d-5A0A075B6B9 Dnajc27-202ENSMUST00000049584 2934 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.42
Trav6d-5A0A075B6B9 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav6d-5A0A075B6B9 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Trav6d-5A0A075B6B9 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.42
Trav6d-5A0A075B6B9 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.42
Trav6d-5A0A075B6B9 Mtfp1-201ENSMUST00000004868 1411 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6d-5A0A075B6B9 Cep85l-205ENSMUST00000220443 7425 ntAPPRIS P2 TSL 5 BASIC12.45□□□□□ -0.42
Trav6d-5A0A075B6B9 Ptp4a3-201ENSMUST00000053232 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6d-5A0A075B6B9 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6d-5A0A075B6B9 Ubl7-201ENSMUST00000163329 1364 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trav6d-5A0A075B6B9 Gm43697-201ENSMUST00000199637 2581 ntBASIC12.45□□□□□ -0.42
Trav6d-5A0A075B6B9 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6d-5A0A075B6B9 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6d-5A0A075B6B9 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC12.45□□□□□ -0.42
Trav6d-5A0A075B6B9 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC12.45□□□□□ -0.42
Trav6d-5A0A075B6B9 Adcy3-204ENSMUST00000127756 4672 ntAPPRIS P3 TSL 5 BASIC12.45□□□□□ -0.42
Trav6d-5A0A075B6B9 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6d-5A0A075B6B9 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6d-5A0A075B6B9 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6d-5A0A075B6B9 Fgfr1op2-202ENSMUST00000058245 918 ntTSL 2 BASIC12.45□□□□□ -0.42
Trav6d-5A0A075B6B9 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC12.45□□□□□ -0.42
Trav6d-5A0A075B6B9 Cblb-201ENSMUST00000114471 6648 ntAPPRIS P2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6d-5A0A075B6B9 Trank1-201ENSMUST00000078626 10520 ntAPPRIS P1 TSL 5 BASIC12.45□□□□□ -0.42
Trav6d-5A0A075B6B9 Zfp12-201ENSMUST00000032591 5265 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6d-5A0A075B6B9 Sf3b4-201ENSMUST00000076372 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6d-5A0A075B6B9 Nrcam-202ENSMUST00000110748 6275 ntAPPRIS ALT2 TSL 1 (best) BASIC12.45□□□□□ -0.42
Trav6d-5A0A075B6B9 Anks1b-205ENSMUST00000179694 2663 ntTSL 5 BASIC12.45□□□□□ -0.42
Trav6d-5A0A075B6B9 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6d-5A0A075B6B9 Hyou1-204ENSMUST00000160902 3374 ntAPPRIS P1 TSL 5 BASIC12.44□□□□□ -0.42
Trav6d-5A0A075B6B9 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6d-5A0A075B6B9 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6d-5A0A075B6B9 Fndc11-201ENSMUST00000050026 1387 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6d-5A0A075B6B9 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6d-5A0A075B6B9 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6d-5A0A075B6B9 Trim11-203ENSMUST00000108810 2301 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6d-5A0A075B6B9 Ints10-203ENSMUST00000110241 2322 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6d-5A0A075B6B9 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6d-5A0A075B6B9 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6d-5A0A075B6B9 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6d-5A0A075B6B9 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6d-5A0A075B6B9 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6d-5A0A075B6B9 Poc1b-204ENSMUST00000159990 3449 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6d-5A0A075B6B9 Sgpl1-202ENSMUST00000122259 4102 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6d-5A0A075B6B9 Dzip1-201ENSMUST00000004055 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6d-5A0A075B6B9 Sgta-202ENSMUST00000218208 1964 ntAPPRIS ALT1 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6d-5A0A075B6B9 Bad-202ENSMUST00000113423 990 ntAPPRIS ALT2 TSL 1 (best) BASIC12.44□□□□□ -0.42
Trav6d-5A0A075B6B9 Mgarp-203ENSMUST00000141156 1246 ntAPPRIS ALT2 TSL 2 BASIC12.44□□□□□ -0.42
Trav6d-5A0A075B6B9 Gm15908-201ENSMUST00000154345 1091 ntTSL 1 (best) BASIC12.44□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms