Protein–RNA interactions for Protein: Q93008

USP9X, Probable ubiquitin carboxyl-terminal hydrolase FAF-X, humanhuman

Predicted RBP Predictions only

Length 2,570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9XQ93008 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC15.91■□□□□ 0.14
USP9XQ93008 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC15.91■□□□□ 0.14
USP9XQ93008 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
USP9XQ93008 IRX5-202ENST00000394636 2401 ntAPPRIS P3 TSL 3 BASIC15.91■□□□□ 0.14
USP9XQ93008 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
USP9XQ93008 C19orf66-201ENST00000253110 2117 ntAPPRIS P3 TSL 2 BASIC15.91■□□□□ 0.14
USP9XQ93008 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
USP9XQ93008 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC15.91■□□□□ 0.14
USP9XQ93008 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
USP9XQ93008 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC15.91■□□□□ 0.14
USP9XQ93008 NARF-204ENST00000390006 1766 ntTSL 2 BASIC15.91■□□□□ 0.14
USP9XQ93008 AC073621.1-201ENST00000392730 636 ntBASIC15.91■□□□□ 0.14
USP9XQ93008 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC15.91■□□□□ 0.14
USP9XQ93008 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC15.91■□□□□ 0.14
USP9XQ93008 SEMA6B-202ENST00000586965 2034 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
USP9XQ93008 AC073592.4-201ENST00000623827 446 ntBASIC15.91■□□□□ 0.14
USP9XQ93008 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
USP9XQ93008 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
USP9XQ93008 P2RX2-206ENST00000389110 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
USP9XQ93008 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC15.91■□□□□ 0.14
USP9XQ93008 DENND5A-201ENST00000328194 5031 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
USP9XQ93008 KCNQ5-213ENST00000629977 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
USP9XQ93008 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
USP9XQ93008 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
USP9XQ93008 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC15.9■□□□□ 0.14
USP9XQ93008 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC15.9■□□□□ 0.14
USP9XQ93008 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC15.9■□□□□ 0.14
USP9XQ93008 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
USP9XQ93008 GRB10-206ENST00000402497 2289 ntTSL 5 BASIC15.9■□□□□ 0.14
USP9XQ93008 AC097374.2-201ENST00000618617 1306 ntBASIC15.9■□□□□ 0.14
USP9XQ93008 AC015922.1-201ENST00000421102 1152 ntBASIC15.9■□□□□ 0.14
USP9XQ93008 HCG4B-203ENST00000450128 991 ntBASIC15.9■□□□□ 0.14
USP9XQ93008 GAPDHP21-201ENST00000450301 1010 ntBASIC15.9■□□□□ 0.14
USP9XQ93008 KLK12-203ENST00000525263 1077 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
USP9XQ93008 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.9■□□□□ 0.14
USP9XQ93008 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC15.9■□□□□ 0.14
USP9XQ93008 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.9■□□□□ 0.14
USP9XQ93008 TMED1-207ENST00000591695 809 ntTSL 5 BASIC15.9■□□□□ 0.14
USP9XQ93008 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC15.9■□□□□ 0.14
USP9XQ93008 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC15.9■□□□□ 0.14
USP9XQ93008 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
USP9XQ93008 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
USP9XQ93008 CCDC88B-203ENST00000359902 2326 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
USP9XQ93008 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC15.9■□□□□ 0.14
USP9XQ93008 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC15.9■□□□□ 0.14
USP9XQ93008 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
USP9XQ93008 LRP5-201ENST00000294304 5159 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
USP9XQ93008 LINC00313-201ENST00000332440 579 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
USP9XQ93008 COPS7B-207ENST00000410024 1103 ntAPPRIS P1 TSL 2 BASIC15.89■□□□□ 0.13
USP9XQ93008 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC15.89■□□□□ 0.13
USP9XQ93008 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC15.89■□□□□ 0.13
USP9XQ93008 AC064836.3-201ENST00000607928 673 ntBASIC15.89■□□□□ 0.13
USP9XQ93008 AL513210.1-201ENST00000629608 234 ntBASIC15.89■□□□□ 0.13
USP9XQ93008 AC099778.1-201ENST00000568593 1911 ntBASIC15.89■□□□□ 0.13
USP9XQ93008 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
USP9XQ93008 AC083864.1-201ENST00000381493 1497 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
USP9XQ93008 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
USP9XQ93008 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC15.89■□□□□ 0.13
USP9XQ93008 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
USP9XQ93008 HSPA1A-202ENST00000608703 1909 ntTSL 2 BASIC15.89■□□□□ 0.13
USP9XQ93008 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
USP9XQ93008 STOM-202ENST00000347359 870 ntTSL 2 BASIC15.89■□□□□ 0.13
USP9XQ93008 TNNT3-203ENST00000381557 1019 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
USP9XQ93008 SLC25A6P5-201ENST00000435663 894 ntBASIC15.89■□□□□ 0.13
USP9XQ93008 AC131097.3-202ENST00000439270 331 ntTSL 5 BASIC15.89■□□□□ 0.13
USP9XQ93008 FOLR3-201ENST00000442948 805 ntTSL 5 BASIC15.89■□□□□ 0.13
USP9XQ93008 C3orf14-202ENST00000462069 631 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
USP9XQ93008 SEC24B-AS1-203ENST00000505895 800 ntTSL 4 BASIC15.89■□□□□ 0.13
USP9XQ93008 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC15.89■□□□□ 0.13
USP9XQ93008 SDCCAG3P1-201ENST00000589292 1150 ntBASIC15.89■□□□□ 0.13
USP9XQ93008 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC15.89■□□□□ 0.13
USP9XQ93008 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
USP9XQ93008 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
USP9XQ93008 KCNIP2-207ENST00000358038 2489 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
USP9XQ93008 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
USP9XQ93008 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
USP9XQ93008 FAM57A-202ENST00000308278 2412 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
USP9XQ93008 MEIS2-207ENST00000557796 2666 ntTSL 5 BASIC15.89■□□□□ 0.13
USP9XQ93008 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
USP9XQ93008 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC15.89■□□□□ 0.13
USP9XQ93008 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
USP9XQ93008 GPR83-202ENST00000539203 1909 ntTSL 5 BASIC15.89■□□□□ 0.13
USP9XQ93008 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
USP9XQ93008 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
USP9XQ93008 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
USP9XQ93008 TIMM50-220ENST00000607714 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
USP9XQ93008 LTC4S-201ENST00000292596 666 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
USP9XQ93008 CA4-201ENST00000300900 1154 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
USP9XQ93008 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
USP9XQ93008 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
USP9XQ93008 GSTO1-207ENST00000539281 1052 ntTSL 5 BASIC15.88■□□□□ 0.13
USP9XQ93008 AP006333.1-201ENST00000543817 575 ntTSL 4 BASIC15.88■□□□□ 0.13
USP9XQ93008 TMEM263-206ENST00000550344 925 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
USP9XQ93008 AC004408.1-201ENST00000579256 573 ntTSL 4 BASIC15.88■□□□□ 0.13
USP9XQ93008 AQP12B-206ENST00000621682 1080 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
USP9XQ93008 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC15.88■□□□□ 0.13
USP9XQ93008 LINC00466-207ENST00000634725 1736 ntTSL 5 BASIC15.88■□□□□ 0.13
USP9XQ93008 EIF2B4-210ENST00000493344 1949 ntTSL 5 BASIC15.88■□□□□ 0.13
USP9XQ93008 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC15.88■□□□□ 0.13
USP9XQ93008 CAPZB-204ENST00000375144 1568 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 30.7 ms