Protein–RNA interactions for Protein: Q8N196

SIX5, Homeobox protein SIX5, humanhuman

Predictions only

Length 739 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX5Q8N196 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.74■□□□□ 0.59
SIX5Q8N196 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC18.74■□□□□ 0.59
SIX5Q8N196 HNRNPA1P28-201ENST00000424481 961 ntBASIC18.74■□□□□ 0.59
SIX5Q8N196 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.74■□□□□ 0.59
SIX5Q8N196 NSUN5P1-208ENST00000473960 500 ntTSL 3 BASIC18.74■□□□□ 0.59
SIX5Q8N196 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC18.74■□□□□ 0.59
SIX5Q8N196 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC18.74■□□□□ 0.59
SIX5Q8N196 SEC11C-205ENST00000588875 718 ntTSL 2 BASIC18.74■□□□□ 0.59
SIX5Q8N196 FAM197Y3-203ENST00000618346 717 ntBASIC18.74■□□□□ 0.59
SIX5Q8N196 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SIX5Q8N196 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.74■□□□□ 0.59
SIX5Q8N196 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC18.74■□□□□ 0.59
SIX5Q8N196 DLX2-201ENST00000234198 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
SIX5Q8N196 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
SIX5Q8N196 TEX21P-204ENST00000641479 1693 ntBASIC18.73■□□□□ 0.59
SIX5Q8N196 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SIX5Q8N196 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SIX5Q8N196 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SIX5Q8N196 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.73■□□□□ 0.59
SIX5Q8N196 KLHDC1-201ENST00000359332 2691 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SIX5Q8N196 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SIX5Q8N196 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
SIX5Q8N196 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC18.73■□□□□ 0.59
SIX5Q8N196 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC18.73■□□□□ 0.59
SIX5Q8N196 MED16-201ENST00000269814 1199 ntTSL 5 BASIC18.73■□□□□ 0.59
SIX5Q8N196 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
SIX5Q8N196 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC18.73■□□□□ 0.59
SIX5Q8N196 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC18.73■□□□□ 0.59
SIX5Q8N196 RPSAP43-201ENST00000402237 625 ntBASIC18.73■□□□□ 0.59
SIX5Q8N196 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC18.73■□□□□ 0.59
SIX5Q8N196 GPX1P2-201ENST00000429271 606 ntBASIC18.73■□□□□ 0.59
SIX5Q8N196 MOBP-208ENST00000441980 830 ntAPPRIS P4 TSL 4 BASIC18.73■□□□□ 0.59
SIX5Q8N196 IGHV3-22-201ENST00000520721 359 ntBASIC18.73■□□□□ 0.59
SIX5Q8N196 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC18.73■□□□□ 0.59
SIX5Q8N196 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC18.73■□□□□ 0.59
SIX5Q8N196 MKNK2-212ENST00000591588 631 ntTSL 2 BASIC18.73■□□□□ 0.59
SIX5Q8N196 NUTM2B-AS1-211ENST00000601369 1233 ntTSL 2 BASIC18.73■□□□□ 0.59
SIX5Q8N196 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC18.73■□□□□ 0.59
SIX5Q8N196 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SIX5Q8N196 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SIX5Q8N196 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SIX5Q8N196 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SIX5Q8N196 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC18.73■□□□□ 0.59
SIX5Q8N196 PILRB-207ENST00000448382 2314 ntTSL 2 BASIC18.73■□□□□ 0.59
SIX5Q8N196 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.73■□□□□ 0.59
SIX5Q8N196 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.73■□□□□ 0.59
SIX5Q8N196 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.73■□□□□ 0.59
SIX5Q8N196 DCK-201ENST00000286648 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.73■□□□□ 0.59
SIX5Q8N196 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SIX5Q8N196 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.72■□□□□ 0.59
SIX5Q8N196 TP73-AS1-210ENST00000637775 1455 ntBASIC18.72■□□□□ 0.59
SIX5Q8N196 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC18.72■□□□□ 0.59
SIX5Q8N196 CLDN14-205ENST00000399139 1231 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SIX5Q8N196 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SIX5Q8N196 MIR3687-2-201ENST00000577708 61 ntBASIC18.72■□□□□ 0.59
SIX5Q8N196 SNHG15-206ENST00000580528 1073 ntTSL 2 BASIC18.72■□□□□ 0.59
SIX5Q8N196 MIR3687-1-201ENST00000614492 61 ntBASIC18.72■□□□□ 0.59
SIX5Q8N196 C1QL3-202ENST00000619991 783 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SIX5Q8N196 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC18.72■□□□□ 0.59
SIX5Q8N196 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC18.72■□□□□ 0.59
SIX5Q8N196 ECE2-203ENST00000359140 3147 ntTSL 1 (best) BASIC18.72■□□□□ 0.59
SIX5Q8N196 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.72■□□□□ 0.59
SIX5Q8N196 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.72■□□□□ 0.59
SIX5Q8N196 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC18.72■□□□□ 0.59
SIX5Q8N196 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SIX5Q8N196 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SIX5Q8N196 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC18.71■□□□□ 0.59
SIX5Q8N196 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.71■□□□□ 0.59
SIX5Q8N196 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SIX5Q8N196 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SIX5Q8N196 VSX1-202ENST00000376709 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SIX5Q8N196 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC18.71■□□□□ 0.59
SIX5Q8N196 TCF3P1-201ENST00000423021 1937 ntBASIC18.71■□□□□ 0.59
SIX5Q8N196 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SIX5Q8N196 CTSG-201ENST00000216336 886 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SIX5Q8N196 ROMO1-205ENST00000397416 288 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
SIX5Q8N196 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.71■□□□□ 0.59
SIX5Q8N196 LINC01705-201ENST00000438158 562 ntTSL 2 BASIC18.71■□□□□ 0.59
SIX5Q8N196 AL591424.1-201ENST00000442569 1213 ntBASIC18.71■□□□□ 0.59
SIX5Q8N196 URGCP-206ENST00000446958 365 ntTSL 2 BASIC18.71■□□□□ 0.59
SIX5Q8N196 SMIM27-204ENST00000453396 1003 ntAPPRIS ALT2 TSL 3 BASIC18.71■□□□□ 0.59
SIX5Q8N196 DHDH-204ENST00000523250 634 ntTSL 5 BASIC18.71■□□□□ 0.59
SIX5Q8N196 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SIX5Q8N196 CD63-204ENST00000546939 779 ntTSL 3 BASIC18.71■□□□□ 0.59
SIX5Q8N196 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC18.71■□□□□ 0.59
SIX5Q8N196 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
SIX5Q8N196 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
SIX5Q8N196 AC005256.1-202ENST00000592934 415 ntTSL 2 BASIC18.71■□□□□ 0.59
SIX5Q8N196 AP001269.4-201ENST00000609611 512 ntBASIC18.71■□□□□ 0.59
SIX5Q8N196 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC18.71■□□□□ 0.59
SIX5Q8N196 AC083906.6-201ENST00000641366 219 ntBASIC18.71■□□□□ 0.59
SIX5Q8N196 AC079781.4-201ENST00000641908 219 ntBASIC18.71■□□□□ 0.59
SIX5Q8N196 CD209-210ENST00000601951 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SIX5Q8N196 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.71■□□□□ 0.59
SIX5Q8N196 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
SIX5Q8N196 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
SIX5Q8N196 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.71■□□□□ 0.59
SIX5Q8N196 GABARAPL3-202ENST00000624044 1851 ntBASIC18.71■□□□□ 0.59
SIX5Q8N196 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
SIX5Q8N196 PRRG3-205ENST00000538575 1303 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 24.5 ms