Protein–RNA interactions for Protein: Q8IVU3

HERC6, Probable E3 ubiquitin-protein ligase HERC6, humanhuman

Predictions only

Length 1,022 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6Q8IVU3 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HERC6Q8IVU3 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HERC6Q8IVU3 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
HERC6Q8IVU3 SLC2A14-214ENST00000542505 1650 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HERC6Q8IVU3 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HERC6Q8IVU3 RPS2P28-201ENST00000314255 741 ntBASIC19.81■□□□□ 0.76
HERC6Q8IVU3 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
HERC6Q8IVU3 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HERC6Q8IVU3 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC19.81■□□□□ 0.76
HERC6Q8IVU3 PGAM5P1-201ENST00000518923 814 ntBASIC19.81■□□□□ 0.76
HERC6Q8IVU3 COX5A-204ENST00000567270 579 ntTSL 3 BASIC19.81■□□□□ 0.76
HERC6Q8IVU3 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC19.81■□□□□ 0.76
HERC6Q8IVU3 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
HERC6Q8IVU3 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
HERC6Q8IVU3 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
HERC6Q8IVU3 CASKIN1-201ENST00000343516 5759 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
HERC6Q8IVU3 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC19.81■□□□□ 0.76
HERC6Q8IVU3 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.81■□□□□ 0.76
HERC6Q8IVU3 PLEKHM2-202ENST00000375799 4122 ntAPPRIS P2 TSL 1 (best) BASIC19.8■□□□□ 0.76
HERC6Q8IVU3 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HERC6Q8IVU3 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.8■□□□□ 0.76
HERC6Q8IVU3 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HERC6Q8IVU3 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HERC6Q8IVU3 KLK12-202ENST00000319590 1074 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
HERC6Q8IVU3 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HERC6Q8IVU3 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HERC6Q8IVU3 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
HERC6Q8IVU3 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC19.8■□□□□ 0.76
HERC6Q8IVU3 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC19.8■□□□□ 0.76
HERC6Q8IVU3 HAGH-208ENST00000566709 1291 ntTSL 5 BASIC19.8■□□□□ 0.76
HERC6Q8IVU3 MED16-213ENST00000616387 1078 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
HERC6Q8IVU3 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC19.8■□□□□ 0.76
HERC6Q8IVU3 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.8■□□□□ 0.76
HERC6Q8IVU3 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
HERC6Q8IVU3 PAN3-AS1-201ENST00000563843 1351 ntBASIC19.8■□□□□ 0.76
HERC6Q8IVU3 AC008105.1-201ENST00000587534 2003 ntTSL 2 BASIC19.8■□□□□ 0.76
HERC6Q8IVU3 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HERC6Q8IVU3 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HERC6Q8IVU3 UBE2F-205ENST00000414443 2100 ntTSL 2 BASIC19.79■□□□□ 0.76
HERC6Q8IVU3 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HERC6Q8IVU3 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.79■□□□□ 0.76
HERC6Q8IVU3 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HERC6Q8IVU3 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.79■□□□□ 0.76
HERC6Q8IVU3 MED16-201ENST00000269814 1199 ntTSL 5 BASIC19.79■□□□□ 0.76
HERC6Q8IVU3 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HERC6Q8IVU3 DUSP15-204ENST00000398083 1212 ntTSL 5 BASIC19.79■□□□□ 0.76
HERC6Q8IVU3 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC19.79■□□□□ 0.76
HERC6Q8IVU3 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC19.79■□□□□ 0.76
HERC6Q8IVU3 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC19.79■□□□□ 0.76
HERC6Q8IVU3 RLN3-202ENST00000585987 541 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HERC6Q8IVU3 HOTTIP_1.1-201ENST00000620415 57 ntBASIC19.79■□□□□ 0.76
HERC6Q8IVU3 AC055717.3-201ENST00000622967 595 ntBASIC19.79■□□□□ 0.76
HERC6Q8IVU3 ANKRD20A8P-203ENST00000641373 517 ntBASIC19.79■□□□□ 0.76
HERC6Q8IVU3 AC068587.9-201ENST00000641814 219 ntBASIC19.79■□□□□ 0.76
HERC6Q8IVU3 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
HERC6Q8IVU3 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
HERC6Q8IVU3 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
HERC6Q8IVU3 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC19.79■□□□□ 0.76
HERC6Q8IVU3 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.79■□□□□ 0.76
HERC6Q8IVU3 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC19.79■□□□□ 0.76
HERC6Q8IVU3 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC19.79■□□□□ 0.76
HERC6Q8IVU3 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
HERC6Q8IVU3 TP73-AS1-210ENST00000637775 1455 ntBASIC19.79■□□□□ 0.76
HERC6Q8IVU3 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC19.78■□□□□ 0.76
HERC6Q8IVU3 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HERC6Q8IVU3 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.78■□□□□ 0.76
HERC6Q8IVU3 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC19.78■□□□□ 0.76
HERC6Q8IVU3 KCNS2-201ENST00000287042 5219 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HERC6Q8IVU3 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.78■□□□□ 0.76
HERC6Q8IVU3 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
HERC6Q8IVU3 EPHA10-202ENST00000373048 5425 ntAPPRIS P2 TSL 5 BASIC19.78■□□□□ 0.76
HERC6Q8IVU3 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HERC6Q8IVU3 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HERC6Q8IVU3 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC19.78■□□□□ 0.76
HERC6Q8IVU3 ZAR1L-201ENST00000345108 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HERC6Q8IVU3 RNF144A-AS1-205ENST00000439208 757 ntTSL 3 BASIC19.78■□□□□ 0.76
HERC6Q8IVU3 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC19.78■□□□□ 0.76
HERC6Q8IVU3 NT5C3B-215ENST00000521789 993 ntTSL 3 BASIC19.78■□□□□ 0.76
HERC6Q8IVU3 SPCS2-202ENST00000526361 772 ntTSL 2 BASIC19.78■□□□□ 0.76
HERC6Q8IVU3 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC19.78■□□□□ 0.76
HERC6Q8IVU3 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC19.78■□□□□ 0.76
HERC6Q8IVU3 AC145285.3-201ENST00000564603 959 ntBASIC19.78■□□□□ 0.76
HERC6Q8IVU3 AC027601.4-201ENST00000611259 610 ntBASIC19.78■□□□□ 0.76
HERC6Q8IVU3 AC125437.2-201ENST00000625180 2167 ntBASIC19.78■□□□□ 0.76
HERC6Q8IVU3 IRX1P1-201ENST00000438849 1838 ntBASIC19.78■□□□□ 0.76
HERC6Q8IVU3 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.78■□□□□ 0.76
HERC6Q8IVU3 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC19.78■□□□□ 0.76
HERC6Q8IVU3 TMEM235-202ENST00000421688 2490 ntAPPRIS P1 TSL 5 BASIC19.78■□□□□ 0.76
HERC6Q8IVU3 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC19.78■□□□□ 0.76
HERC6Q8IVU3 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC19.78■□□□□ 0.76
HERC6Q8IVU3 SLC26A11-212ENST00000572725 1862 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HERC6Q8IVU3 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC19.77■□□□□ 0.76
HERC6Q8IVU3 KRT8P50-201ENST00000562022 1438 ntBASIC19.77■□□□□ 0.76
HERC6Q8IVU3 AC104109.2-201ENST00000602919 1418 ntBASIC19.77■□□□□ 0.76
HERC6Q8IVU3 EGFL7-204ENST00000406555 1529 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HERC6Q8IVU3 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HERC6Q8IVU3 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
HERC6Q8IVU3 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC19.77■□□□□ 0.76
HERC6Q8IVU3 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC19.77■□□□□ 0.76
HERC6Q8IVU3 PTTG1-202ENST00000393964 1070 ntAPPRIS P1 TSL 1 (best) BASIC19.77■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 47.1 ms