Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 SMOC2-206ENST00000535039 1875 ntTSL 5 BASIC9.97□□□□□ -0.81
UBR4Q5T4S7 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC9.96□□□□□ -0.81
UBR4Q5T4S7 RANBP10-206ENST00000602677 2374 ntTSL 5 BASIC9.96□□□□□ -0.81
UBR4Q5T4S7 SPEM1-201ENST00000323675 982 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
UBR4Q5T4S7 PIK3IP1-202ENST00000402249 999 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
UBR4Q5T4S7 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC9.96□□□□□ -0.81
UBR4Q5T4S7 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
UBR4Q5T4S7 GTSF1-201ENST00000305879 804 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
UBR4Q5T4S7 DDT-202ENST00000398344 713 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.81
UBR4Q5T4S7 TNFRSF14-202ENST00000409119 896 ntAPPRIS ALT2 TSL 3 BASIC9.96□□□□□ -0.81
UBR4Q5T4S7 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC9.96□□□□□ -0.81
UBR4Q5T4S7 AC079328.1-201ENST00000560358 952 ntBASIC9.96□□□□□ -0.81
UBR4Q5T4S7 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC9.96□□□□□ -0.81
UBR4Q5T4S7 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC9.96□□□□□ -0.81
UBR4Q5T4S7 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.81
UBR4Q5T4S7 KRT8P44-201ENST00000441609 1350 ntBASIC9.96□□□□□ -0.81
UBR4Q5T4S7 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC9.96□□□□□ -0.81
UBR4Q5T4S7 PLSCR4-204ENST00000446574 1442 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.82
UBR4Q5T4S7 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
UBR4Q5T4S7 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
UBR4Q5T4S7 PABPN1L-202ENST00000419291 1272 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
UBR4Q5T4S7 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC9.96□□□□□ -0.82
UBR4Q5T4S7 LINC01640-201ENST00000452505 550 ntTSL 4 BASIC9.96□□□□□ -0.82
UBR4Q5T4S7 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC9.96□□□□□ -0.82
UBR4Q5T4S7 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC9.96□□□□□ -0.82
UBR4Q5T4S7 AC004877.2-201ENST00000623941 599 ntBASIC9.96□□□□□ -0.82
UBR4Q5T4S7 AC084121.4-201ENST00000641598 221 ntBASIC9.96□□□□□ -0.82
UBR4Q5T4S7 AF228730.8-201ENST00000642140 221 ntBASIC9.96□□□□□ -0.82
UBR4Q5T4S7 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC9.96□□□□□ -0.82
UBR4Q5T4S7 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC9.96□□□□□ -0.82
UBR4Q5T4S7 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC9.96□□□□□ -0.82
UBR4Q5T4S7 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC9.96□□□□□ -0.82
UBR4Q5T4S7 HRAS-202ENST00000397594 1099 ntTSL 2 BASIC9.96□□□□□ -0.82
UBR4Q5T4S7 ARL6IP4-207ENST00000426960 910 ntAPPRIS ALT2 TSL 3 BASIC9.96□□□□□ -0.82
UBR4Q5T4S7 DPF3-210ENST00000556509 1138 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
UBR4Q5T4S7 AC073592.4-201ENST00000623827 446 ntBASIC9.96□□□□□ -0.82
UBR4Q5T4S7 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC9.96□□□□□ -0.82
UBR4Q5T4S7 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
UBR4Q5T4S7 GOLGA6L5P-202ENST00000515341 1828 ntBASIC9.95□□□□□ -0.82
UBR4Q5T4S7 SNX7-201ENST00000306121 1734 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
UBR4Q5T4S7 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
UBR4Q5T4S7 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
UBR4Q5T4S7 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC9.95□□□□□ -0.82
UBR4Q5T4S7 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
UBR4Q5T4S7 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
UBR4Q5T4S7 FAM58CP-201ENST00000435741 640 ntBASIC9.95□□□□□ -0.82
UBR4Q5T4S7 GIMAP3P-201ENST00000495150 836 ntBASIC9.95□□□□□ -0.82
UBR4Q5T4S7 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC9.95□□□□□ -0.82
UBR4Q5T4S7 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC9.95□□□□□ -0.82
UBR4Q5T4S7 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC9.95□□□□□ -0.82
UBR4Q5T4S7 PLK5-205ENST00000642079 1969 ntBASIC9.95□□□□□ -0.82
UBR4Q5T4S7 B4GALT2-204ENST00000434555 1923 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
UBR4Q5T4S7 ZBTB45-205ENST00000600990 2159 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
UBR4Q5T4S7 SPTBN4-203ENST00000392023 2419 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
UBR4Q5T4S7 AC098864.1-205ENST00000315302 2260 ntTSL 2 BASIC9.95□□□□□ -0.82
UBR4Q5T4S7 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
UBR4Q5T4S7 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
UBR4Q5T4S7 IQCF3-202ENST00000440739 505 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
UBR4Q5T4S7 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
UBR4Q5T4S7 GUSBP2-202ENST00000479900 1203 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
UBR4Q5T4S7 AC106886.1-201ENST00000568660 600 ntBASIC9.95□□□□□ -0.82
UBR4Q5T4S7 SPATA33-208ENST00000568929 1264 ntAPPRIS ALT2 TSL 2 BASIC9.95□□□□□ -0.82
UBR4Q5T4S7 AC004706.3-202ENST00000621574 984 ntBASIC9.95□□□□□ -0.82
UBR4Q5T4S7 AC010507.1-201ENST00000633895 436 ntBASIC9.95□□□□□ -0.82
UBR4Q5T4S7 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC9.95□□□□□ -0.82
UBR4Q5T4S7 RPL13-202ENST00000393099 2385 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
UBR4Q5T4S7 BCAR1-209ENST00000546196 1340 ntBASIC9.95□□□□□ -0.82
UBR4Q5T4S7 RFLNA-201ENST00000324038 2148 ntAPPRIS P2 TSL 2 BASIC9.95□□□□□ -0.82
UBR4Q5T4S7 AC244015.2-201ENST00000616358 1861 ntBASIC9.95□□□□□ -0.82
UBR4Q5T4S7 AL024507.2-201ENST00000606070 2574 ntBASIC9.95□□□□□ -0.82
UBR4Q5T4S7 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC9.95□□□□□ -0.82
UBR4Q5T4S7 KREMEN2-204ENST00000572045 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
UBR4Q5T4S7 DPYS-201ENST00000351513 2127 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
UBR4Q5T4S7 ENSA-206ENST00000361631 725 ntTSL 2 BASIC9.95□□□□□ -0.82
UBR4Q5T4S7 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
UBR4Q5T4S7 ACTBP11-201ENST00000436287 1126 ntBASIC9.95□□□□□ -0.82
UBR4Q5T4S7 MCPH1-AS1-203ENST00000525186 869 ntTSL 3 BASIC9.95□□□□□ -0.82
UBR4Q5T4S7 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
UBR4Q5T4S7 AC104417.2-201ENST00000562989 1793 ntBASIC9.95□□□□□ -0.82
UBR4Q5T4S7 TFG-201ENST00000240851 1978 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
UBR4Q5T4S7 IRF7-205ENST00000397574 1968 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
UBR4Q5T4S7 HNF1B-201ENST00000613727 1546 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
UBR4Q5T4S7 RPS27A-201ENST00000272317 1071 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
UBR4Q5T4S7 LCE1A-201ENST00000335123 422 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
UBR4Q5T4S7 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
UBR4Q5T4S7 MPRIPP1-201ENST00000452433 1089 ntBASIC9.95□□□□□ -0.82
UBR4Q5T4S7 YIF1A-210ENST00000496746 667 ntTSL 2 BASIC9.95□□□□□ -0.82
UBR4Q5T4S7 NDUFA4L2-202ENST00000554503 1177 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
UBR4Q5T4S7 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC9.95□□□□□ -0.82
UBR4Q5T4S7 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
UBR4Q5T4S7 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC9.95□□□□□ -0.82
UBR4Q5T4S7 DNAJC7-203ENST00000457167 2022 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
UBR4Q5T4S7 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC9.94□□□□□ -0.82
UBR4Q5T4S7 PRR22-202ENST00000419421 1392 ntAPPRIS P1 TSL 2 BASIC9.94□□□□□ -0.82
UBR4Q5T4S7 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC9.94□□□□□ -0.82
UBR4Q5T4S7 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC9.94□□□□□ -0.82
UBR4Q5T4S7 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
UBR4Q5T4S7 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC9.94□□□□□ -0.82
UBR4Q5T4S7 GGCT-203ENST00000409144 836 ntTSL 2 BASIC9.94□□□□□ -0.82
UBR4Q5T4S7 GGCT-201ENST00000005374 1032 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Retrieved 100 of 98,524 protein–RNA pairs in 53.1 ms