Protein–RNA interactions for Protein: P53675

CLTCL1, Clathrin heavy chain 2, humanhuman

Predictions only

Length 1,640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1P53675 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC26.17■■□□□ 1.78
CLTCL1P53675 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CLTCL1P53675 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC26.17■■□□□ 1.78
CLTCL1P53675 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC26.17■■□□□ 1.78
CLTCL1P53675 IRF8-202ENST00000562492 946 ntTSL 3 BASIC26.17■■□□□ 1.78
CLTCL1P53675 LITAF-211ENST00000572255 516 ntTSL 4 BASIC26.17■■□□□ 1.78
CLTCL1P53675 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC26.17■■□□□ 1.78
CLTCL1P53675 NSUN2-206ENST00000506139 2619 ntAPPRIS ALT2 TSL 2 BASIC26.17■■□□□ 1.78
CLTCL1P53675 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
CLTCL1P53675 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
CLTCL1P53675 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
CLTCL1P53675 OGFOD2-211ENST00000538628 1696 ntTSL 1 (best) BASIC26.17■■□□□ 1.78
CLTCL1P53675 PAN3-AS1-201ENST00000563843 1351 ntBASIC26.16■■□□□ 1.78
CLTCL1P53675 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
CLTCL1P53675 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CLTCL1P53675 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC26.16■■□□□ 1.78
CLTCL1P53675 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC26.16■■□□□ 1.78
CLTCL1P53675 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC26.16■■□□□ 1.78
CLTCL1P53675 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
CLTCL1P53675 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
CLTCL1P53675 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC26.15■■□□□ 1.78
CLTCL1P53675 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC26.15■■□□□ 1.78
CLTCL1P53675 SNCG-201ENST00000348795 684 ntTSL 2 BASIC26.15■■□□□ 1.78
CLTCL1P53675 AC132008.2-207ENST00000454517 770 ntBASIC26.15■■□□□ 1.78
CLTCL1P53675 AC073648.2-201ENST00000510116 352 ntBASIC26.15■■□□□ 1.78
CLTCL1P53675 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC26.15■■□□□ 1.78
CLTCL1P53675 AC009533.2-201ENST00000543664 586 ntBASIC26.15■■□□□ 1.78
CLTCL1P53675 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC26.15■■□□□ 1.78
CLTCL1P53675 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC26.15■■□□□ 1.78
CLTCL1P53675 ACBD6-201ENST00000367595 1670 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
CLTCL1P53675 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
CLTCL1P53675 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC26.15■■□□□ 1.78
CLTCL1P53675 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC26.15■■□□□ 1.78
CLTCL1P53675 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC26.14■■□□□ 1.78
CLTCL1P53675 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC26.14■■□□□ 1.78
CLTCL1P53675 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC26.14■■□□□ 1.78
CLTCL1P53675 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
CLTCL1P53675 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC26.14■■□□□ 1.78
CLTCL1P53675 SCARNA2-201ENST00000458748 420 ntBASIC26.14■■□□□ 1.78
CLTCL1P53675 AC112698.1-201ENST00000510299 916 ntBASIC26.14■■□□□ 1.78
CLTCL1P53675 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
CLTCL1P53675 AC139887.3-201ENST00000568585 713 ntBASIC26.14■■□□□ 1.78
CLTCL1P53675 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC26.14■■□□□ 1.78
CLTCL1P53675 CYGB-205ENST00000590175 830 ntTSL 3 BASIC26.14■■□□□ 1.78
CLTCL1P53675 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
CLTCL1P53675 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
CLTCL1P53675 KRT8P47-201ENST00000604727 1398 ntBASIC26.14■■□□□ 1.78
CLTCL1P53675 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.78
CLTCL1P53675 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC26.14■■□□□ 1.78
CLTCL1P53675 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC26.14■■□□□ 1.78
CLTCL1P53675 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC26.14■■□□□ 1.77
CLTCL1P53675 RARRES1-201ENST00000237696 1952 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
CLTCL1P53675 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.77
CLTCL1P53675 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC26.14■■□□□ 1.77
CLTCL1P53675 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC26.14■■□□□ 1.77
CLTCL1P53675 DANCR-204ENST00000444958 709 ntTSL 3 BASIC26.14■■□□□ 1.77
CLTCL1P53675 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC26.14■■□□□ 1.77
CLTCL1P53675 AC006538.3-201ENST00000612495 578 ntBASIC26.14■■□□□ 1.77
CLTCL1P53675 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CLTCL1P53675 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC26.13■■□□□ 1.77
CLTCL1P53675 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC26.13■■□□□ 1.77
CLTCL1P53675 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC26.13■■□□□ 1.77
CLTCL1P53675 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CLTCL1P53675 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC26.13■■□□□ 1.77
CLTCL1P53675 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC26.13■■□□□ 1.77
CLTCL1P53675 HIST2H3DP1-201ENST00000401004 416 ntBASIC26.13■■□□□ 1.77
CLTCL1P53675 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC26.13■■□□□ 1.77
CLTCL1P53675 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC26.13■■□□□ 1.77
CLTCL1P53675 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC26.13■■□□□ 1.77
CLTCL1P53675 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC26.13■■□□□ 1.77
CLTCL1P53675 AC064862.7-201ENST00000604520 867 ntBASIC26.13■■□□□ 1.77
CLTCL1P53675 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC26.13■■□□□ 1.77
CLTCL1P53675 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
CLTCL1P53675 MARCH9-201ENST00000266643 2982 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CLTCL1P53675 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CLTCL1P53675 PYCR2-208ENST00000612039 1549 ntTSL 3 BASIC26.12■■□□□ 1.77
CLTCL1P53675 PYCR2-209ENST00000612651 1538 ntTSL 5 BASIC26.12■■□□□ 1.77
CLTCL1P53675 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CLTCL1P53675 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC26.12■■□□□ 1.77
CLTCL1P53675 FAM3A-205ENST00000393572 1041 ntTSL 2 BASIC26.12■■□□□ 1.77
CLTCL1P53675 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC26.12■■□□□ 1.77
CLTCL1P53675 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CLTCL1P53675 IGHV3-22-201ENST00000520721 359 ntBASIC26.12■■□□□ 1.77
CLTCL1P53675 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC26.12■■□□□ 1.77
CLTCL1P53675 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC26.12■■□□□ 1.77
CLTCL1P53675 AC011498.3-201ENST00000590159 569 ntTSL 4 BASIC26.12■■□□□ 1.77
CLTCL1P53675 MTDHP3-201ENST00000594186 672 ntBASIC26.12■■□□□ 1.77
CLTCL1P53675 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
CLTCL1P53675 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
CLTCL1P53675 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC26.12■■□□□ 1.77
CLTCL1P53675 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
CLTCL1P53675 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC26.11■■□□□ 1.77
CLTCL1P53675 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
CLTCL1P53675 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
CLTCL1P53675 SATB1-AS1-201ENST00000414198 737 ntTSL 2 BASIC26.11■■□□□ 1.77
CLTCL1P53675 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC26.11■■□□□ 1.77
CLTCL1P53675 AC145285.3-201ENST00000564603 959 ntBASIC26.11■■□□□ 1.77
CLTCL1P53675 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC26.11■■□□□ 1.77
CLTCL1P53675 CTSA-201ENST00000191018 1898 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
CLTCL1P53675 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC26.11■■□□□ 1.77
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms