Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.97■□□□□ 0.79
HOXC8P31273 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.97■□□□□ 0.79
HOXC8P31273 MIR574-201ENST00000385209 96 ntBASIC19.97■□□□□ 0.79
HOXC8P31273 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HOXC8P31273 RBSN-204ENST00000449050 903 ntTSL 2 BASIC19.97■□□□□ 0.79
HOXC8P31273 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HOXC8P31273 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC19.97■□□□□ 0.79
HOXC8P31273 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC19.97■□□□□ 0.79
HOXC8P31273 COX5A-204ENST00000567270 579 ntTSL 3 BASIC19.97■□□□□ 0.79
HOXC8P31273 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC19.97■□□□□ 0.79
HOXC8P31273 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC19.97■□□□□ 0.79
HOXC8P31273 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC19.97■□□□□ 0.79
HOXC8P31273 AC114488.2-214ENST00000609033 813 ntTSL 5 BASIC19.97■□□□□ 0.79
HOXC8P31273 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC19.97■□□□□ 0.79
HOXC8P31273 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC19.97■□□□□ 0.79
HOXC8P31273 AF228730.7-201ENST00000641842 219 ntBASIC19.97■□□□□ 0.79
HOXC8P31273 GPATCH3-201ENST00000361720 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HOXC8P31273 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC19.97■□□□□ 0.79
HOXC8P31273 AQP5-201ENST00000293599 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HOXC8P31273 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC19.97■□□□□ 0.79
HOXC8P31273 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC19.97■□□□□ 0.79
HOXC8P31273 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
HOXC8P31273 PAN3-AS1-201ENST00000563843 1351 ntBASIC19.96■□□□□ 0.79
HOXC8P31273 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC19.96■□□□□ 0.79
HOXC8P31273 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HOXC8P31273 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
HOXC8P31273 DUS1L-202ENST00000354321 2151 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HOXC8P31273 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC19.96■□□□□ 0.79
HOXC8P31273 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HOXC8P31273 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC19.96■□□□□ 0.79
HOXC8P31273 PMS2P1-201ENST00000431037 1228 ntBASIC19.96■□□□□ 0.79
HOXC8P31273 SCARNA2-201ENST00000458748 420 ntBASIC19.96■□□□□ 0.79
HOXC8P31273 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
HOXC8P31273 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC19.96■□□□□ 0.79
HOXC8P31273 RNPS1P1-201ENST00000507437 918 ntBASIC19.96■□□□□ 0.79
HOXC8P31273 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HOXC8P31273 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC19.96■□□□□ 0.79
HOXC8P31273 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
HOXC8P31273 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC19.96■□□□□ 0.79
HOXC8P31273 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC19.96■□□□□ 0.79
HOXC8P31273 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HOXC8P31273 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC19.96■□□□□ 0.79
HOXC8P31273 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HOXC8P31273 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC19.96■□□□□ 0.79
HOXC8P31273 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC19.96■□□□□ 0.79
HOXC8P31273 PALM-202ENST00000338448 2725 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.79
HOXC8P31273 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HOXC8P31273 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
HOXC8P31273 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HOXC8P31273 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.95■□□□□ 0.78
HOXC8P31273 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC19.95■□□□□ 0.78
HOXC8P31273 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
HOXC8P31273 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HOXC8P31273 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HOXC8P31273 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
HOXC8P31273 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC19.95■□□□□ 0.78
HOXC8P31273 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HOXC8P31273 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
HOXC8P31273 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC19.95■□□□□ 0.78
HOXC8P31273 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
HOXC8P31273 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HOXC8P31273 HNRNPDP1-201ENST00000439535 754 ntBASIC19.95■□□□□ 0.78
HOXC8P31273 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC19.95■□□□□ 0.78
HOXC8P31273 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC19.95■□□□□ 0.78
HOXC8P31273 MTDHP3-201ENST00000594186 672 ntBASIC19.95■□□□□ 0.78
HOXC8P31273 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC19.95■□□□□ 0.78
HOXC8P31273 AL049840.3-201ENST00000602669 611 ntBASIC19.95■□□□□ 0.78
HOXC8P31273 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC19.95■□□□□ 0.78
HOXC8P31273 FAM215A-202ENST00000632077 792 ntBASIC19.95■□□□□ 0.78
HOXC8P31273 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC19.95■□□□□ 0.78
HOXC8P31273 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC19.95■□□□□ 0.78
HOXC8P31273 RGS11-204ENST00000397770 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HOXC8P31273 ADAP1-216ENST00000539900 2178 ntTSL 2 BASIC19.95■□□□□ 0.78
HOXC8P31273 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.95■□□□□ 0.78
HOXC8P31273 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HOXC8P31273 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HOXC8P31273 C8orf46-215ENST00000522977 1347 ntTSL 2 BASIC19.95■□□□□ 0.78
HOXC8P31273 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.95■□□□□ 0.78
HOXC8P31273 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HOXC8P31273 AKT2-206ENST00000392038 5300 ntAPPRIS P1 TSL 1 (best) BASIC19.95■□□□□ 0.78
HOXC8P31273 AP005117.1-201ENST00000584346 1413 ntBASIC19.94■□□□□ 0.78
HOXC8P31273 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC19.94■□□□□ 0.78
HOXC8P31273 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.94■□□□□ 0.78
HOXC8P31273 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.94■□□□□ 0.78
HOXC8P31273 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC19.94■□□□□ 0.78
HOXC8P31273 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HOXC8P31273 ANO7L1-203ENST00000602586 1720 ntBASIC19.94■□□□□ 0.78
HOXC8P31273 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.94■□□□□ 0.78
HOXC8P31273 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC19.94■□□□□ 0.78
HOXC8P31273 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC19.94■□□□□ 0.78
HOXC8P31273 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC19.94■□□□□ 0.78
HOXC8P31273 GGT1-207ENST00000404532 853 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HOXC8P31273 KIRREL3-AS3-201ENST00000404882 831 ntBASIC19.94■□□□□ 0.78
HOXC8P31273 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC19.94■□□□□ 0.78
HOXC8P31273 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC19.94■□□□□ 0.78
HOXC8P31273 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC19.94■□□□□ 0.78
HOXC8P31273 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
HOXC8P31273 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC19.94■□□□□ 0.78
HOXC8P31273 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC19.94■□□□□ 0.78
HOXC8P31273 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.94■□□□□ 0.78
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms