Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC17.19■□□□□ 0.34
TRBV5-3A0A0A0MS03 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV5-3A0A0A0MS03 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.19■□□□□ 0.34
TRBV5-3A0A0A0MS03 EXOC5-201ENST00000340918 2632 ntTSL 2 BASIC17.18■□□□□ 0.34
TRBV5-3A0A0A0MS03 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV5-3A0A0A0MS03 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV5-3A0A0A0MS03 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV5-3A0A0A0MS03 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC17.18■□□□□ 0.34
TRBV5-3A0A0A0MS03 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC17.18■□□□□ 0.34
TRBV5-3A0A0A0MS03 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV5-3A0A0A0MS03 AGAP1-205ENST00000409538 6138 ntTSL 5 BASIC17.18■□□□□ 0.34
TRBV5-3A0A0A0MS03 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.18■□□□□ 0.34
TRBV5-3A0A0A0MS03 C21orf59-201ENST00000290155 1692 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV5-3A0A0A0MS03 KRT18P23-201ENST00000435622 1283 ntBASIC17.18■□□□□ 0.34
TRBV5-3A0A0A0MS03 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC17.18■□□□□ 0.34
TRBV5-3A0A0A0MS03 WWOX-216ENST00000569818 525 ntBASIC17.18■□□□□ 0.34
TRBV5-3A0A0A0MS03 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC17.18■□□□□ 0.34
TRBV5-3A0A0A0MS03 AP005242.2-201ENST00000580065 1175 ntBASIC17.18■□□□□ 0.34
TRBV5-3A0A0A0MS03 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC17.18■□□□□ 0.34
TRBV5-3A0A0A0MS03 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV5-3A0A0A0MS03 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV5-3A0A0A0MS03 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC17.18■□□□□ 0.34
TRBV5-3A0A0A0MS03 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC17.18■□□□□ 0.34
TRBV5-3A0A0A0MS03 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV5-3A0A0A0MS03 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV5-3A0A0A0MS03 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV5-3A0A0A0MS03 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC17.18■□□□□ 0.34
TRBV5-3A0A0A0MS03 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.18■□□□□ 0.34
TRBV5-3A0A0A0MS03 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV5-3A0A0A0MS03 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV5-3A0A0A0MS03 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV5-3A0A0A0MS03 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.18■□□□□ 0.34
TRBV5-3A0A0A0MS03 ARNTL-201ENST00000389707 2776 ntAPPRIS P3 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV5-3A0A0A0MS03 OCIAD1-204ENST00000425583 1915 ntTSL 3 BASIC17.17■□□□□ 0.34
TRBV5-3A0A0A0MS03 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC17.17■□□□□ 0.34
TRBV5-3A0A0A0MS03 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
TRBV5-3A0A0A0MS03 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV5-3A0A0A0MS03 HAUS8-202ENST00000448593 1545 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
TRBV5-3A0A0A0MS03 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV5-3A0A0A0MS03 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV5-3A0A0A0MS03 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC17.17■□□□□ 0.34
TRBV5-3A0A0A0MS03 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC17.17■□□□□ 0.34
TRBV5-3A0A0A0MS03 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.17■□□□□ 0.34
TRBV5-3A0A0A0MS03 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.17■□□□□ 0.34
TRBV5-3A0A0A0MS03 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV5-3A0A0A0MS03 HNRNPD-201ENST00000313899 3033 ntAPPRIS P4 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV5-3A0A0A0MS03 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV5-3A0A0A0MS03 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV5-3A0A0A0MS03 SPATC1L-201ENST00000291672 2303 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
TRBV5-3A0A0A0MS03 MARK1-202ENST00000366918 5169 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV5-3A0A0A0MS03 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC17.17■□□□□ 0.34
TRBV5-3A0A0A0MS03 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
TRBV5-3A0A0A0MS03 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC17.17■□□□□ 0.34
TRBV5-3A0A0A0MS03 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC17.17■□□□□ 0.34
TRBV5-3A0A0A0MS03 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC17.17■□□□□ 0.34
TRBV5-3A0A0A0MS03 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC17.17■□□□□ 0.34
TRBV5-3A0A0A0MS03 CR769767.2-201ENST00000622735 460 ntBASIC17.17■□□□□ 0.34
TRBV5-3A0A0A0MS03 AC113410.3-201ENST00000623366 203 ntBASIC17.17■□□□□ 0.34
TRBV5-3A0A0A0MS03 SH2D3C-213ENST00000629203 2478 ntTSL 2 BASIC17.17■□□□□ 0.34
TRBV5-3A0A0A0MS03 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.17■□□□□ 0.34
TRBV5-3A0A0A0MS03 FZD10-202ENST00000539839 3282 ntBASIC17.17■□□□□ 0.34
TRBV5-3A0A0A0MS03 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC17.17■□□□□ 0.34
TRBV5-3A0A0A0MS03 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC17.17■□□□□ 0.34
TRBV5-3A0A0A0MS03 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC17.17■□□□□ 0.34
TRBV5-3A0A0A0MS03 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV5-3A0A0A0MS03 GTF2IP4-202ENST00000544802 3609 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV5-3A0A0A0MS03 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV5-3A0A0A0MS03 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV5-3A0A0A0MS03 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC17.17■□□□□ 0.34
TRBV5-3A0A0A0MS03 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV5-3A0A0A0MS03 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV5-3A0A0A0MS03 AGAP2-AS1-201ENST00000542466 1500 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV5-3A0A0A0MS03 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV5-3A0A0A0MS03 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC17.16■□□□□ 0.34
TRBV5-3A0A0A0MS03 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV5-3A0A0A0MS03 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC17.16■□□□□ 0.34
TRBV5-3A0A0A0MS03 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.16■□□□□ 0.34
TRBV5-3A0A0A0MS03 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.16■□□□□ 0.34
TRBV5-3A0A0A0MS03 WDR90-201ENST00000293879 5488 ntAPPRIS P2 TSL 5 BASIC17.16■□□□□ 0.34
TRBV5-3A0A0A0MS03 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC17.16■□□□□ 0.34
TRBV5-3A0A0A0MS03 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC17.16■□□□□ 0.34
TRBV5-3A0A0A0MS03 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.16■□□□□ 0.34
TRBV5-3A0A0A0MS03 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV5-3A0A0A0MS03 ABHD17AP1-201ENST00000358206 933 ntBASIC17.16■□□□□ 0.34
TRBV5-3A0A0A0MS03 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV5-3A0A0A0MS03 ILF2-202ENST00000368681 726 ntTSL 2 BASIC17.16■□□□□ 0.34
TRBV5-3A0A0A0MS03 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
TRBV5-3A0A0A0MS03 CRYGFP-201ENST00000418459 633 ntBASIC17.16■□□□□ 0.34
TRBV5-3A0A0A0MS03 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV5-3A0A0A0MS03 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV5-3A0A0A0MS03 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC17.16■□□□□ 0.34
TRBV5-3A0A0A0MS03 IRX5-204ENST00000560154 879 ntTSL 5 BASIC17.16■□□□□ 0.34
TRBV5-3A0A0A0MS03 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.16■□□□□ 0.34
TRBV5-3A0A0A0MS03 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.16■□□□□ 0.34
TRBV5-3A0A0A0MS03 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV5-3A0A0A0MS03 ITM2C-210ENST00000620962 501 ntBASIC17.16■□□□□ 0.34
TRBV5-3A0A0A0MS03 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC17.16■□□□□ 0.34
TRBV5-3A0A0A0MS03 JMJD6-202ENST00000397625 1603 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV5-3A0A0A0MS03 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
TRBV5-3A0A0A0MS03 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 23.6 ms