Protein–RNA interactions for Protein: Q96GM5

SMARCD1, SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily D member 1, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1Q96GM5 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.3■□□□□ 0.68
SMARCD1Q96GM5 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC19.3■□□□□ 0.68
SMARCD1Q96GM5 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SMARCD1Q96GM5 TMEM171-201ENST00000287773 1247 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
SMARCD1Q96GM5 HES2-202ENST00000377836 507 ntTSL 2 BASIC19.3■□□□□ 0.68
SMARCD1Q96GM5 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.3■□□□□ 0.68
SMARCD1Q96GM5 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.3■□□□□ 0.68
SMARCD1Q96GM5 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SMARCD1Q96GM5 PAQR4-204ENST00000574988 869 ntTSL 2 BASIC19.3■□□□□ 0.68
SMARCD1Q96GM5 AC138207.7-201ENST00000584499 668 ntTSL 5 BASIC19.3■□□□□ 0.68
SMARCD1Q96GM5 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
SMARCD1Q96GM5 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SMARCD1Q96GM5 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.3■□□□□ 0.68
SMARCD1Q96GM5 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMARCD1Q96GM5 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMARCD1Q96GM5 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SMARCD1Q96GM5 LRRC27-201ENST00000344079 1809 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
SMARCD1Q96GM5 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC19.3■□□□□ 0.68
SMARCD1Q96GM5 WIZP1-201ENST00000531444 2299 ntBASIC19.3■□□□□ 0.68
SMARCD1Q96GM5 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMARCD1Q96GM5 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19.29■□□□□ 0.68
SMARCD1Q96GM5 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
SMARCD1Q96GM5 ZNF623-203ENST00000526926 2612 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
SMARCD1Q96GM5 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMARCD1Q96GM5 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMARCD1Q96GM5 MED30-201ENST00000297347 985 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMARCD1Q96GM5 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMARCD1Q96GM5 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMARCD1Q96GM5 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMARCD1Q96GM5 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMARCD1Q96GM5 VKORC1-205ENST00000394975 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMARCD1Q96GM5 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC19.29■□□□□ 0.68
SMARCD1Q96GM5 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMARCD1Q96GM5 C6orf48-210ENST00000614363 748 ntAPPRIS P1 TSL 5 BASIC19.29■□□□□ 0.68
SMARCD1Q96GM5 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.29■□□□□ 0.68
SMARCD1Q96GM5 SPERT-202ENST00000378966 1842 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SMARCD1Q96GM5 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.29■□□□□ 0.68
SMARCD1Q96GM5 GAS7-205ENST00000542249 1799 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SMARCD1Q96GM5 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SMARCD1Q96GM5 PRSS23-209ENST00000533902 2043 ntTSL 4 BASIC19.29■□□□□ 0.68
SMARCD1Q96GM5 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMARCD1Q96GM5 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC19.28■□□□□ 0.68
SMARCD1Q96GM5 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.28■□□□□ 0.68
SMARCD1Q96GM5 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SMARCD1Q96GM5 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SMARCD1Q96GM5 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SMARCD1Q96GM5 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.28■□□□□ 0.68
SMARCD1Q96GM5 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SMARCD1Q96GM5 AP000347.1-209ENST00000437294 557 ntTSL 4 BASIC19.28■□□□□ 0.68
SMARCD1Q96GM5 TSSC2-201ENST00000450217 709 ntBASIC19.28■□□□□ 0.68
SMARCD1Q96GM5 AC113404.2-201ENST00000507884 177 ntBASIC19.28■□□□□ 0.68
SMARCD1Q96GM5 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC19.28■□□□□ 0.68
SMARCD1Q96GM5 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.28■□□□□ 0.68
SMARCD1Q96GM5 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMARCD1Q96GM5 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SMARCD1Q96GM5 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMARCD1Q96GM5 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC19.28■□□□□ 0.68
SMARCD1Q96GM5 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMARCD1Q96GM5 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMARCD1Q96GM5 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC19.28■□□□□ 0.68
SMARCD1Q96GM5 AC009041.2-204ENST00000568394 3343 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
SMARCD1Q96GM5 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.28■□□□□ 0.68
SMARCD1Q96GM5 AL138781.2-201ENST00000617896 1843 ntBASIC19.28■□□□□ 0.68
SMARCD1Q96GM5 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC19.28■□□□□ 0.68
SMARCD1Q96GM5 SIGIRR-202ENST00000397632 1598 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SMARCD1Q96GM5 GMCL1P1-201ENST00000463439 1581 ntBASIC19.27■□□□□ 0.68
SMARCD1Q96GM5 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SMARCD1Q96GM5 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SMARCD1Q96GM5 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SMARCD1Q96GM5 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SMARCD1Q96GM5 UNKL-202ENST00000301712 1431 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SMARCD1Q96GM5 CDH22-201ENST00000372262 3661 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SMARCD1Q96GM5 BPTF-201ENST00000306378 9688 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.68
SMARCD1Q96GM5 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SMARCD1Q96GM5 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
SMARCD1Q96GM5 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SMARCD1Q96GM5 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SMARCD1Q96GM5 NMU-205ENST00000511469 756 ntTSL 3 BASIC19.27■□□□□ 0.68
SMARCD1Q96GM5 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.27■□□□□ 0.68
SMARCD1Q96GM5 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.68
SMARCD1Q96GM5 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
SMARCD1Q96GM5 AC016734.2-201ENST00000624325 1377 ntBASIC19.27■□□□□ 0.68
SMARCD1Q96GM5 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC19.27■□□□□ 0.68
SMARCD1Q96GM5 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.27■□□□□ 0.68
SMARCD1Q96GM5 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SMARCD1Q96GM5 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.27■□□□□ 0.67
SMARCD1Q96GM5 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC19.27■□□□□ 0.67
SMARCD1Q96GM5 INO80E-207ENST00000563197 2103 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
SMARCD1Q96GM5 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.67
SMARCD1Q96GM5 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.27■□□□□ 0.67
SMARCD1Q96GM5 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMARCD1Q96GM5 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMARCD1Q96GM5 P2RY6-207ENST00000538328 1425 ntAPPRIS P1 TSL 3 BASIC19.26■□□□□ 0.67
SMARCD1Q96GM5 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMARCD1Q96GM5 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMARCD1Q96GM5 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC19.26■□□□□ 0.67
SMARCD1Q96GM5 LINC01126-201ENST00000623515 1646 ntBASIC19.26■□□□□ 0.67
SMARCD1Q96GM5 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC19.26■□□□□ 0.67
SMARCD1Q96GM5 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
SMARCD1Q96GM5 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms