Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
USP6NLQ92738 AC112777.1-201ENST00000540175 1423 ntBASIC20.77■□□□□ 0.91
USP6NLQ92738 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC20.77■□□□□ 0.91
USP6NLQ92738 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC20.77■□□□□ 0.91
USP6NLQ92738 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC20.77■□□□□ 0.91
USP6NLQ92738 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.77■□□□□ 0.91
USP6NLQ92738 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
USP6NLQ92738 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
USP6NLQ92738 MAZ-212ENST00000568282 1593 ntTSL 5 BASIC20.76■□□□□ 0.91
USP6NLQ92738 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
USP6NLQ92738 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC20.76■□□□□ 0.91
USP6NLQ92738 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC20.76■□□□□ 0.91
USP6NLQ92738 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP6NLQ92738 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC20.76■□□□□ 0.91
USP6NLQ92738 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.76■□□□□ 0.91
USP6NLQ92738 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC20.76■□□□□ 0.91
USP6NLQ92738 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
USP6NLQ92738 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.76■□□□□ 0.91
USP6NLQ92738 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC20.76■□□□□ 0.91
USP6NLQ92738 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
USP6NLQ92738 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC20.76■□□□□ 0.91
USP6NLQ92738 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.76■□□□□ 0.91
USP6NLQ92738 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
USP6NLQ92738 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC20.76■□□□□ 0.91
USP6NLQ92738 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.76■□□□□ 0.91
USP6NLQ92738 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
USP6NLQ92738 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
USP6NLQ92738 SERPINF2-201ENST00000324015 2284 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
USP6NLQ92738 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP6NLQ92738 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP6NLQ92738 SCYL2-201ENST00000360820 5779 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP6NLQ92738 INTS4P1-201ENST00000438455 1935 ntBASIC20.75■□□□□ 0.91
USP6NLQ92738 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP6NLQ92738 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC20.75■□□□□ 0.91
USP6NLQ92738 S100A16-204ENST00000368706 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP6NLQ92738 POMC-203ENST00000395826 959 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
USP6NLQ92738 C2orf49-202ENST00000410049 854 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
USP6NLQ92738 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC20.75■□□□□ 0.91
USP6NLQ92738 IGHV3-22-201ENST00000520721 359 ntBASIC20.75■□□□□ 0.91
USP6NLQ92738 AP002770.1-201ENST00000540547 428 ntTSL 4 BASIC20.75■□□□□ 0.91
USP6NLQ92738 AC145285.3-201ENST00000564603 959 ntBASIC20.75■□□□□ 0.91
USP6NLQ92738 COX5A-204ENST00000567270 579 ntTSL 3 BASIC20.75■□□□□ 0.91
USP6NLQ92738 AC135776.2-201ENST00000567803 714 ntTSL 4 BASIC20.75■□□□□ 0.91
USP6NLQ92738 NUBP2-214ENST00000568706 913 ntTSL 2 BASIC20.75■□□□□ 0.91
USP6NLQ92738 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC20.75■□□□□ 0.91
USP6NLQ92738 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
USP6NLQ92738 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC20.75■□□□□ 0.91
USP6NLQ92738 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
USP6NLQ92738 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP6NLQ92738 B3GNT3-202ENST00000595387 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
USP6NLQ92738 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.75■□□□□ 0.91
USP6NLQ92738 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
USP6NLQ92738 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
USP6NLQ92738 ZNF259P1-201ENST00000407656 1365 ntBASIC20.74■□□□□ 0.91
USP6NLQ92738 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
USP6NLQ92738 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
USP6NLQ92738 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
USP6NLQ92738 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC20.74■□□□□ 0.91
USP6NLQ92738 MIR149-201ENST00000384879 89 ntBASIC20.74■□□□□ 0.91
USP6NLQ92738 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
USP6NLQ92738 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
USP6NLQ92738 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
USP6NLQ92738 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
USP6NLQ92738 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
USP6NLQ92738 MEG3-211ENST00000452514 461 ntTSL 3 BASIC20.74■□□□□ 0.91
USP6NLQ92738 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC20.74■□□□□ 0.91
USP6NLQ92738 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
USP6NLQ92738 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC20.74■□□□□ 0.91
USP6NLQ92738 PAM16-208ENST00000573553 722 ntTSL 2 BASIC20.74■□□□□ 0.91
USP6NLQ92738 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
USP6NLQ92738 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC20.74■□□□□ 0.91
USP6NLQ92738 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
USP6NLQ92738 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
USP6NLQ92738 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
USP6NLQ92738 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
USP6NLQ92738 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
USP6NLQ92738 PCDHAC2-203ENST00000615316 3011 ntBASIC20.74■□□□□ 0.91
USP6NLQ92738 BTG3-201ENST00000339775 1485 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
USP6NLQ92738 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
USP6NLQ92738 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
USP6NLQ92738 PSMD11-202ENST00000457654 2159 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
USP6NLQ92738 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
USP6NLQ92738 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC20.73■□□□□ 0.91
USP6NLQ92738 NARF-204ENST00000390006 1766 ntTSL 2 BASIC20.73■□□□□ 0.91
USP6NLQ92738 METTL21A-208ENST00000448007 1770 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
USP6NLQ92738 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
USP6NLQ92738 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
USP6NLQ92738 MIR940-201ENST00000401276 94 ntBASIC20.73■□□□□ 0.91
USP6NLQ92738 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
USP6NLQ92738 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC20.73■□□□□ 0.91
USP6NLQ92738 CD63-204ENST00000546939 779 ntTSL 3 BASIC20.73■□□□□ 0.91
USP6NLQ92738 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC20.73■□□□□ 0.91
USP6NLQ92738 DCTPP1-203ENST00000567983 801 ntTSL 5 BASIC20.73■□□□□ 0.91
USP6NLQ92738 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC20.73■□□□□ 0.91
USP6NLQ92738 AL138831.2-201ENST00000606564 490 ntBASIC20.73■□□□□ 0.91
USP6NLQ92738 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
USP6NLQ92738 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC20.73■□□□□ 0.91
USP6NLQ92738 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
USP6NLQ92738 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC20.73■□□□□ 0.91
USP6NLQ92738 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms