Protein–RNA interactions for Protein: Q5S007

LRRK2, Leucine-rich repeat serine/threonine-protein kinase 2, humanhuman

Predictions only

Length 2,527 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRK2Q5S007 CITED2-204ENST00000618718 901 ntTSL 2 BASIC15.88■□□□□ 0.13
LRRK2Q5S007 GPSM3-206ENST00000375040 1476 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LRRK2Q5S007 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LRRK2Q5S007 AC092667.1-201ENST00000434301 2586 ntBASIC15.87■□□□□ 0.13
LRRK2Q5S007 SEPT11-209ENST00000510515 1886 ntTSL 2 BASIC15.87■□□□□ 0.13
LRRK2Q5S007 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LRRK2Q5S007 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LRRK2Q5S007 KLK5-203ENST00000593428 1365 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LRRK2Q5S007 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LRRK2Q5S007 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC15.87■□□□□ 0.13
LRRK2Q5S007 SPTBN4-201ENST00000338932 8686 ntAPPRIS ALT1 TSL 5 BASIC15.87■□□□□ 0.13
LRRK2Q5S007 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC15.87■□□□□ 0.13
LRRK2Q5S007 PMS2P4-201ENST00000412466 1052 ntBASIC15.87■□□□□ 0.13
LRRK2Q5S007 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC15.87■□□□□ 0.13
LRRK2Q5S007 NMU-203ENST00000507338 658 ntTSL 3 BASIC15.87■□□□□ 0.13
LRRK2Q5S007 AP000442.1-201ENST00000533552 769 ntTSL 5 BASIC15.87■□□□□ 0.13
LRRK2Q5S007 RNF151-202ENST00000569210 853 ntTSL 2 BASIC15.87■□□□□ 0.13
LRRK2Q5S007 KATNBL1P6-202ENST00000562413 1466 ntBASIC15.87■□□□□ 0.13
LRRK2Q5S007 GPX3-209ENST00000614343 1478 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LRRK2Q5S007 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC15.87■□□□□ 0.13
LRRK2Q5S007 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
LRRK2Q5S007 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC15.87■□□□□ 0.13
LRRK2Q5S007 INTS11-249ENST00000618806 1523 ntTSL 2 BASIC15.87■□□□□ 0.13
LRRK2Q5S007 PROK1-201ENST00000271331 1338 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LRRK2Q5S007 AL357033.4-201ENST00000617703 1807 ntBASIC15.87■□□□□ 0.13
LRRK2Q5S007 KCNK9-203ENST00000520439 1441 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LRRK2Q5S007 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
LRRK2Q5S007 GPR89P-201ENST00000407924 1495 ntBASIC15.87■□□□□ 0.13
LRRK2Q5S007 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC15.87■□□□□ 0.13
LRRK2Q5S007 LCN2-203ENST00000373017 848 ntAPPRIS P2 TSL 5 BASIC15.87■□□□□ 0.13
LRRK2Q5S007 VCX3A-201ENST00000381089 995 ntAPPRIS P2 TSL 1 (best) BASIC15.87■□□□□ 0.13
LRRK2Q5S007 BLCAP-202ENST00000397131 633 ntAPPRIS P1 TSL 3 BASIC15.87■□□□□ 0.13
LRRK2Q5S007 BLCAP-203ENST00000397134 566 ntAPPRIS P1 TSL 4 BASIC15.87■□□□□ 0.13
LRRK2Q5S007 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC15.87■□□□□ 0.13
LRRK2Q5S007 PUS1-205ENST00000535067 838 ntTSL 3 BASIC15.87■□□□□ 0.13
LRRK2Q5S007 AQP6-203ENST00000551733 849 ntTSL 3 BASIC15.87■□□□□ 0.13
LRRK2Q5S007 AC099518.3-201ENST00000564808 809 ntAPPRIS P5 TSL 4 BASIC15.87■□□□□ 0.13
LRRK2Q5S007 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC15.87■□□□□ 0.13
LRRK2Q5S007 DET1-201ENST00000268148 2267 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRRK2Q5S007 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRRK2Q5S007 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC15.86■□□□□ 0.13
LRRK2Q5S007 TOR1A-201ENST00000351698 2076 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRRK2Q5S007 ATP6AP1-201ENST00000369762 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRRK2Q5S007 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRRK2Q5S007 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRRK2Q5S007 NUDT17-201ENST00000334513 1473 ntAPPRIS P1 TSL 5 BASIC15.86■□□□□ 0.13
LRRK2Q5S007 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRRK2Q5S007 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRRK2Q5S007 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC15.86■□□□□ 0.13
LRRK2Q5S007 AL049612.1-201ENST00000427017 694 ntTSL 5 BASIC15.86■□□□□ 0.13
LRRK2Q5S007 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC15.86■□□□□ 0.13
LRRK2Q5S007 ACTG1P14-201ENST00000446382 1122 ntBASIC15.86■□□□□ 0.13
LRRK2Q5S007 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC15.86■□□□□ 0.13
LRRK2Q5S007 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC15.86■□□□□ 0.13
LRRK2Q5S007 AL031432.2-201ENST00000566714 459 ntBASIC15.86■□□□□ 0.13
LRRK2Q5S007 AL928711.1-201ENST00000570165 459 ntBASIC15.86■□□□□ 0.13
LRRK2Q5S007 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRRK2Q5S007 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRRK2Q5S007 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRRK2Q5S007 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRRK2Q5S007 COQ10A-202ENST00000433805 1410 ntAPPRIS ALT2 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRRK2Q5S007 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC15.86■□□□□ 0.13
LRRK2Q5S007 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC15.86■□□□□ 0.13
LRRK2Q5S007 PSMD8-201ENST00000215071 1553 ntAPPRIS P1 TSL 1 (best) BASIC15.86■□□□□ 0.13
LRRK2Q5S007 STARD3-202ENST00000394250 1949 ntTSL 2 BASIC15.86■□□□□ 0.13
LRRK2Q5S007 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC15.86■□□□□ 0.13
LRRK2Q5S007 EDF1-203ENST00000371649 790 ntTSL 2 BASIC15.86■□□□□ 0.13
LRRK2Q5S007 PRUNE2-202ENST00000376713 1069 ntTSL 5 BASIC15.86■□□□□ 0.13
LRRK2Q5S007 AC073621.1-201ENST00000392730 636 ntBASIC15.86■□□□□ 0.13
LRRK2Q5S007 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC15.86■□□□□ 0.13
LRRK2Q5S007 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC15.86■□□□□ 0.13
LRRK2Q5S007 AC109322.1-201ENST00000524499 1264 ntBASIC15.86■□□□□ 0.13
LRRK2Q5S007 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC15.86■□□□□ 0.13
LRRK2Q5S007 AC004449.1-201ENST00000564240 433 ntBASIC15.86■□□□□ 0.13
LRRK2Q5S007 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC15.85■□□□□ 0.13
LRRK2Q5S007 ANXA4-202ENST00000409920 1414 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LRRK2Q5S007 Z82202.1-201ENST00000623446 1880 ntBASIC15.85■□□□□ 0.13
LRRK2Q5S007 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
LRRK2Q5S007 SLAIN1-206ENST00000418532 2855 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
LRRK2Q5S007 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC15.85■□□□□ 0.13
LRRK2Q5S007 TEAD2-201ENST00000311227 2164 ntAPPRIS P3 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRRK2Q5S007 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
LRRK2Q5S007 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LRRK2Q5S007 SOD2-201ENST00000337404 991 ntTSL 2 BASIC15.85■□□□□ 0.13
LRRK2Q5S007 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
LRRK2Q5S007 AP002414.1-201ENST00000391405 1147 ntBASIC15.85■□□□□ 0.13
LRRK2Q5S007 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC15.85■□□□□ 0.13
LRRK2Q5S007 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC15.85■□□□□ 0.13
LRRK2Q5S007 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC15.85■□□□□ 0.13
LRRK2Q5S007 AC019103.1-201ENST00000503095 272 ntTSL 3 BASIC15.85■□□□□ 0.13
LRRK2Q5S007 CCND3-213ENST00000510503 1257 ntTSL 3 BASIC15.85■□□□□ 0.13
LRRK2Q5S007 RNA5SP421-201ENST00000516864 134 ntBASIC15.85■□□□□ 0.13
LRRK2Q5S007 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC15.85■□□□□ 0.13
LRRK2Q5S007 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC15.85■□□□□ 0.13
LRRK2Q5S007 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRRK2Q5S007 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC15.85■□□□□ 0.13
LRRK2Q5S007 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC15.85■□□□□ 0.13
LRRK2Q5S007 GNA11-201ENST00000078429 4147 ntAPPRIS P1 TSL 1 (best) BASIC15.85■□□□□ 0.13
LRRK2Q5S007 COL23A1-201ENST00000390654 3061 ntAPPRIS P2 TSL 5 BASIC15.85■□□□□ 0.13
LRRK2Q5S007 KRT8P50-201ENST00000562022 1438 ntBASIC15.85■□□□□ 0.13
Retrieved 100 of 98,524 protein–RNA pairs in 24.9 ms