Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM71Q2Q1W2 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM71Q2Q1W2 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM71Q2Q1W2 SLC22A18-203ENST00000380574 1755 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM71Q2Q1W2 BRPF3-202ENST00000357641 6052 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
TRIM71Q2Q1W2 ASL-204ENST00000395331 1538 ntTSL 5 BASIC20.02■□□□□ 0.8
TRIM71Q2Q1W2 ARHGEF2-204ENST00000368315 1645 ntTSL 5 BASIC20.02■□□□□ 0.8
TRIM71Q2Q1W2 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM71Q2Q1W2 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM71Q2Q1W2 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM71Q2Q1W2 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
TRIM71Q2Q1W2 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC20.02■□□□□ 0.8
TRIM71Q2Q1W2 PRSS27-201ENST00000302641 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM71Q2Q1W2 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC20.02■□□□□ 0.8
TRIM71Q2Q1W2 KLHL7-201ENST00000322275 969 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM71Q2Q1W2 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM71Q2Q1W2 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC20.02■□□□□ 0.8
TRIM71Q2Q1W2 THAP5-204ENST00000438865 868 ntTSL 2 BASIC20.02■□□□□ 0.8
TRIM71Q2Q1W2 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC20.02■□□□□ 0.8
TRIM71Q2Q1W2 FGFR3P6-201ENST00000457012 610 ntBASIC20.02■□□□□ 0.8
TRIM71Q2Q1W2 SMIM4-202ENST00000476842 522 ntTSL 4 BASIC20.02■□□□□ 0.8
TRIM71Q2Q1W2 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC20.02■□□□□ 0.8
TRIM71Q2Q1W2 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC20.02■□□□□ 0.8
TRIM71Q2Q1W2 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC20.02■□□□□ 0.8
TRIM71Q2Q1W2 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC20.02■□□□□ 0.8
TRIM71Q2Q1W2 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC20.02■□□□□ 0.8
TRIM71Q2Q1W2 AL355877.3-201ENST00000622820 899 ntBASIC20.02■□□□□ 0.8
TRIM71Q2Q1W2 ABBA01031661.1-201ENST00000634362 1253 ntBASIC20.02■□□□□ 0.8
TRIM71Q2Q1W2 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC20.02■□□□□ 0.8
TRIM71Q2Q1W2 GULP1-206ENST00000409830 1376 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM71Q2Q1W2 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC20.02■□□□□ 0.8
TRIM71Q2Q1W2 TP73-AS1-210ENST00000637775 1455 ntBASIC20.02■□□□□ 0.8
TRIM71Q2Q1W2 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM71Q2Q1W2 SNAI3-AS1-205ENST00000568633 2096 ntBASIC20.02■□□□□ 0.8
TRIM71Q2Q1W2 AL049812.1-201ENST00000432563 2267 ntBASIC20.02■□□□□ 0.8
TRIM71Q2Q1W2 NLRP6-201ENST00000312165 2679 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
TRIM71Q2Q1W2 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TRIM71Q2Q1W2 SLC16A3-221ENST00000617373 2048 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
TRIM71Q2Q1W2 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
TRIM71Q2Q1W2 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.79
TRIM71Q2Q1W2 VGLL4-210ENST00000426568 1428 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
TRIM71Q2Q1W2 AC112777.1-201ENST00000540175 1423 ntBASIC20.02■□□□□ 0.79
TRIM71Q2Q1W2 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.02■□□□□ 0.79
TRIM71Q2Q1W2 DOK3-201ENST00000312943 2292 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM71Q2Q1W2 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM71Q2Q1W2 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM71Q2Q1W2 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM71Q2Q1W2 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM71Q2Q1W2 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC20.01■□□□□ 0.79
TRIM71Q2Q1W2 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC20.01■□□□□ 0.79
TRIM71Q2Q1W2 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC20.01■□□□□ 0.79
TRIM71Q2Q1W2 AF186996.4-201ENST00000467186 377 ntBASIC20.01■□□□□ 0.79
TRIM71Q2Q1W2 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC20.01■□□□□ 0.79
TRIM71Q2Q1W2 IRF8-202ENST00000562492 946 ntTSL 3 BASIC20.01■□□□□ 0.79
TRIM71Q2Q1W2 AC008687.5-201ENST00000593746 558 ntBASIC20.01■□□□□ 0.79
TRIM71Q2Q1W2 AL049840.3-201ENST00000602669 611 ntBASIC20.01■□□□□ 0.79
TRIM71Q2Q1W2 ANO2-212ENST00000612575 1087 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM71Q2Q1W2 MIR7706-201ENST00000613747 67 ntBASIC20.01■□□□□ 0.79
TRIM71Q2Q1W2 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC20.01■□□□□ 0.79
TRIM71Q2Q1W2 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC20.01■□□□□ 0.79
TRIM71Q2Q1W2 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
TRIM71Q2Q1W2 AFG3L1P-217ENST00000557444 2447 ntBASIC20.01■□□□□ 0.79
TRIM71Q2Q1W2 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC20■□□□□ 0.79
TRIM71Q2Q1W2 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
TRIM71Q2Q1W2 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRIM71Q2Q1W2 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM71Q2Q1W2 NRXN1-202ENST00000342183 3315 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRIM71Q2Q1W2 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
TRIM71Q2Q1W2 CACNG7-201ENST00000222212 1016 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM71Q2Q1W2 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC20■□□□□ 0.79
TRIM71Q2Q1W2 CLDN7-202ENST00000397317 1228 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM71Q2Q1W2 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRIM71Q2Q1W2 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC20■□□□□ 0.79
TRIM71Q2Q1W2 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM71Q2Q1W2 MEG3-211ENST00000452514 461 ntTSL 3 BASIC20■□□□□ 0.79
TRIM71Q2Q1W2 C1orf109-203ENST00000464085 919 ntAPPRIS P1 TSL 2 BASIC20■□□□□ 0.79
TRIM71Q2Q1W2 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC20■□□□□ 0.79
TRIM71Q2Q1W2 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC20■□□□□ 0.79
TRIM71Q2Q1W2 HNF4A-208ENST00000609795 1192 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRIM71Q2Q1W2 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC20■□□□□ 0.79
TRIM71Q2Q1W2 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC20■□□□□ 0.79
TRIM71Q2Q1W2 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM71Q2Q1W2 PEX6-201ENST00000244546 2696 ntTSL 1 (best) BASIC20■□□□□ 0.79
TRIM71Q2Q1W2 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM71Q2Q1W2 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC20■□□□□ 0.79
TRIM71Q2Q1W2 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC20■□□□□ 0.79
TRIM71Q2Q1W2 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC20■□□□□ 0.79
TRIM71Q2Q1W2 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC20■□□□□ 0.79
TRIM71Q2Q1W2 ANKRD13D-201ENST00000308440 2219 ntTSL 2 BASIC19.99■□□□□ 0.79
TRIM71Q2Q1W2 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC19.99■□□□□ 0.79
TRIM71Q2Q1W2 AC099343.3-201ENST00000605834 2503 ntBASIC19.99■□□□□ 0.79
TRIM71Q2Q1W2 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM71Q2Q1W2 MED16-201ENST00000269814 1199 ntTSL 5 BASIC19.99■□□□□ 0.79
TRIM71Q2Q1W2 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM71Q2Q1W2 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC19.99■□□□□ 0.79
TRIM71Q2Q1W2 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC19.99■□□□□ 0.79
TRIM71Q2Q1W2 TTLL12-204ENST00000494035 888 ntTSL 2 BASIC19.99■□□□□ 0.79
TRIM71Q2Q1W2 RNPS1P1-201ENST00000507437 918 ntBASIC19.99■□□□□ 0.79
TRIM71Q2Q1W2 LINC02199-203ENST00000510229 496 ntTSL 3 BASIC19.99■□□□□ 0.79
TRIM71Q2Q1W2 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC19.99■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 99.1 ms