Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC11.33□□□□□ -0.6
HSPG2P98160 HAND2-AS1-237ENST00000616485 2420 ntTSL 2 BASIC11.33□□□□□ -0.6
HSPG2P98160 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC11.33□□□□□ -0.6
HSPG2P98160 GSTZ1-202ENST00000349555 867 ntTSL 2 BASIC11.33□□□□□ -0.6
HSPG2P98160 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
HSPG2P98160 KRT18P41-201ENST00000518924 1277 ntBASIC11.33□□□□□ -0.6
HSPG2P98160 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC11.33□□□□□ -0.6
HSPG2P98160 CITED2-204ENST00000618718 901 ntTSL 2 BASIC11.33□□□□□ -0.6
HSPG2P98160 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
HSPG2P98160 PCDHB12-202ENST00000622978 2093 ntTSL 2 BASIC11.33□□□□□ -0.6
HSPG2P98160 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
HSPG2P98160 SYT17-207ENST00000568115 1721 ntTSL 5 BASIC11.33□□□□□ -0.6
HSPG2P98160 GPR148-201ENST00000309926 1267 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
HSPG2P98160 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
HSPG2P98160 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC11.33□□□□□ -0.6
HSPG2P98160 ADA-207ENST00000537820 1128 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
HSPG2P98160 NNAT-201ENST00000062104 1297 ntAPPRIS P4 TSL 1 (best) BASIC11.33□□□□□ -0.6
HSPG2P98160 OGFOD3-202ENST00000329197 1652 ntTSL 1 (best) BASIC11.33□□□□□ -0.6
HSPG2P98160 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
HSPG2P98160 C5orf30-203ENST00000515669 1573 ntAPPRIS P1 TSL 3 BASIC11.33□□□□□ -0.6
HSPG2P98160 ITM2C-202ENST00000326427 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.33□□□□□ -0.6
HSPG2P98160 TAF7-201ENST00000313368 2334 ntAPPRIS P1 BASIC11.33□□□□□ -0.6
HSPG2P98160 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC11.33□□□□□ -0.6
HSPG2P98160 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC11.33□□□□□ -0.6
HSPG2P98160 SPOCK3-217ENST00000511269 1768 ntAPPRIS P3 TSL 2 BASIC11.33□□□□□ -0.6
HSPG2P98160 MYL6-202ENST00000348108 722 ntAPPRIS ALT1 TSL 3 BASIC11.32□□□□□ -0.6
HSPG2P98160 AC005544.2-201ENST00000579138 229 ntTSL 5 BASIC11.32□□□□□ -0.6
HSPG2P98160 LIM2-202ENST00000596399 861 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HSPG2P98160 RBP1-207ENST00000619087 516 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HSPG2P98160 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC11.32□□□□□ -0.6
HSPG2P98160 AC105339.1-204ENST00000636249 355 ntBASIC11.32□□□□□ -0.6
HSPG2P98160 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
HSPG2P98160 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HSPG2P98160 STAC3-201ENST00000332782 1656 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
HSPG2P98160 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
HSPG2P98160 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
HSPG2P98160 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC11.32□□□□□ -0.6
HSPG2P98160 NXPH2-201ENST00000272641 1052 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HSPG2P98160 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HSPG2P98160 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
HSPG2P98160 PMS2P4-201ENST00000412466 1052 ntBASIC11.32□□□□□ -0.6
HSPG2P98160 AC016735.2-201ENST00000438736 569 ntTSL 4 BASIC11.32□□□□□ -0.6
HSPG2P98160 BARX1-AS1-202ENST00000454594 307 ntTSL 3 BASIC11.32□□□□□ -0.6
HSPG2P98160 AC022494.1-201ENST00000466044 728 ntBASIC11.32□□□□□ -0.6
HSPG2P98160 OR10S1-201ENST00000531945 1121 ntAPPRIS P2 BASIC11.32□□□□□ -0.6
HSPG2P98160 SNHG15-207ENST00000582727 1039 ntTSL 2 BASIC11.32□□□□□ -0.6
HSPG2P98160 OR10S1-202ENST00000641123 1121 ntAPPRIS ALT2 BASIC11.32□□□□□ -0.6
HSPG2P98160 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC11.32□□□□□ -0.6
HSPG2P98160 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HSPG2P98160 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HSPG2P98160 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
HSPG2P98160 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HSPG2P98160 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HSPG2P98160 SRSF4-201ENST00000373795 2387 ntAPPRIS P2 TSL 1 (best) BASIC11.32□□□□□ -0.6
HSPG2P98160 CLPP-201ENST00000245816 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HSPG2P98160 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HSPG2P98160 OR8S1-201ENST00000310194 1080 ntBASIC11.32□□□□□ -0.6
HSPG2P98160 UGGT2-202ENST00000376714 1233 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
HSPG2P98160 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC11.32□□□□□ -0.6
HSPG2P98160 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC11.32□□□□□ -0.6
HSPG2P98160 AC108073.2-201ENST00000464002 357 ntBASIC11.32□□□□□ -0.6
HSPG2P98160 AC105202.1-202ENST00000522060 834 ntTSL 3 BASIC11.32□□□□□ -0.6
HSPG2P98160 IGHV3OR16-6-201ENST00000568775 360 ntBASIC11.32□□□□□ -0.6
HSPG2P98160 AC024592.3-202ENST00000586349 506 ntTSL 2 BASIC11.32□□□□□ -0.6
HSPG2P98160 UGGT2-212ENST00000621375 1004 ntTSL 5 BASIC11.32□□□□□ -0.6
HSPG2P98160 UGGT2-213ENST00000638479 1010 ntTSL 5 BASIC11.32□□□□□ -0.6
HSPG2P98160 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC11.32□□□□□ -0.6
HSPG2P98160 HFE2-204ENST00000475797 1381 ntTSL 2 BASIC11.32□□□□□ -0.6
HSPG2P98160 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC11.32□□□□□ -0.6
HSPG2P98160 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC11.32□□□□□ -0.6
HSPG2P98160 MRPL20P1-201ENST00000400819 433 ntBASIC11.32□□□□□ -0.6
HSPG2P98160 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC11.32□□□□□ -0.6
HSPG2P98160 AC113404.2-201ENST00000507884 177 ntBASIC11.32□□□□□ -0.6
HSPG2P98160 AC008127.1-201ENST00000548424 499 ntTSL 5 BASIC11.32□□□□□ -0.6
HSPG2P98160 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC11.32□□□□□ -0.6
HSPG2P98160 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
HSPG2P98160 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC11.32□□□□□ -0.6
HSPG2P98160 PLEKHB1-204ENST00000398494 2061 ntAPPRIS ALT1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HSPG2P98160 FAM9A-202ENST00000543214 1544 ntAPPRIS P1 TSL 1 (best) BASIC11.32□□□□□ -0.6
HSPG2P98160 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC11.32□□□□□ -0.6
HSPG2P98160 DAZAP2-201ENST00000412716 2598 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
HSPG2P98160 SIGLEC16-201ENST00000599858 1437 ntBASIC11.31□□□□□ -0.6
HSPG2P98160 SSR4-204ENST00000370087 745 ntAPPRIS P1 TSL 3 BASIC11.31□□□□□ -0.6
HSPG2P98160 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC11.31□□□□□ -0.6
HSPG2P98160 BX005266.1-201ENST00000473402 457 ntBASIC11.31□□□□□ -0.6
HSPG2P98160 BX890604.1-208ENST00000490920 726 ntTSL 2 BASIC11.31□□□□□ -0.6
HSPG2P98160 AP005018.1-201ENST00000525475 301 ntBASIC11.31□□□□□ -0.6
HSPG2P98160 TCAP-202ENST00000578283 583 ntTSL 5 BASIC11.31□□□□□ -0.6
HSPG2P98160 RN7SL204P-201ENST00000582831 262 ntBASIC11.31□□□□□ -0.6
HSPG2P98160 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
HSPG2P98160 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
HSPG2P98160 ELMOD1-202ENST00000443271 1990 ntAPPRIS P1 TSL 2 BASIC11.31□□□□□ -0.6
HSPG2P98160 ZFAND6-201ENST00000261749 1814 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
HSPG2P98160 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
HSPG2P98160 C18orf8-214ENST00000615148 1958 ntTSL 5 BASIC11.31□□□□□ -0.6
HSPG2P98160 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC11.31□□□□□ -0.6
HSPG2P98160 CTHRC1-201ENST00000330295 1271 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
HSPG2P98160 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC11.31□□□□□ -0.6
HSPG2P98160 MOK-203ENST00000517966 1230 ntTSL 1 (best) BASIC11.31□□□□□ -0.6
HSPG2P98160 AC091812.2-201ENST00000619081 385 ntBASIC11.31□□□□□ -0.6
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms