Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN6P56747 ANXA8-202ENST00000583448 1971 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN6P56747 C19orf25-201ENST00000427685 1410 ntTSL 2 BASIC17.62■□□□□ 0.41
CLDN6P56747 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
CLDN6P56747 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CLDN6P56747 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.62■□□□□ 0.41
CLDN6P56747 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN6P56747 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN6P56747 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN6P56747 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN6P56747 JAM2-202ENST00000400532 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN6P56747 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN6P56747 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.61■□□□□ 0.41
CLDN6P56747 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN6P56747 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN6P56747 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN6P56747 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN6P56747 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN6P56747 MRPS18A-201ENST00000372116 785 ntTSL 2 BASIC17.61■□□□□ 0.41
CLDN6P56747 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN6P56747 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.61■□□□□ 0.41
CLDN6P56747 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.61■□□□□ 0.41
CLDN6P56747 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC17.61■□□□□ 0.41
CLDN6P56747 AC018712.1-201ENST00000455767 687 ntBASIC17.61■□□□□ 0.41
CLDN6P56747 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC17.61■□□□□ 0.41
CLDN6P56747 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC17.61■□□□□ 0.41
CLDN6P56747 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.61■□□□□ 0.41
CLDN6P56747 LITAF-211ENST00000572255 516 ntTSL 4 BASIC17.61■□□□□ 0.41
CLDN6P56747 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.61■□□□□ 0.41
CLDN6P56747 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC17.61■□□□□ 0.41
CLDN6P56747 PMS2P7-201ENST00000506558 1336 ntBASIC17.61■□□□□ 0.41
CLDN6P56747 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.61■□□□□ 0.41
CLDN6P56747 ARSI-203ENST00000515301 1429 ntTSL 4 BASIC17.61■□□□□ 0.41
CLDN6P56747 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN6P56747 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN6P56747 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC17.61■□□□□ 0.41
CLDN6P56747 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN6P56747 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN6P56747 FEM1AP3-201ENST00000403722 1741 ntBASIC17.61■□□□□ 0.41
CLDN6P56747 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
CLDN6P56747 AL357033.4-201ENST00000617703 1807 ntBASIC17.61■□□□□ 0.41
CLDN6P56747 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.6■□□□□ 0.41
CLDN6P56747 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN6P56747 IGFBP3-210ENST00000613132 2412 ntTSL 5 BASIC17.6■□□□□ 0.41
CLDN6P56747 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.6■□□□□ 0.41
CLDN6P56747 MOSPD3-201ENST00000223054 1053 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CLDN6P56747 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC17.6■□□□□ 0.41
CLDN6P56747 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC17.6■□□□□ 0.41
CLDN6P56747 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC17.6■□□□□ 0.41
CLDN6P56747 RNPS1P1-201ENST00000507437 918 ntBASIC17.6■□□□□ 0.41
CLDN6P56747 AC009567.1-201ENST00000515071 525 ntTSL 4 BASIC17.6■□□□□ 0.41
CLDN6P56747 COX6C-204ENST00000520271 571 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CLDN6P56747 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC17.6■□□□□ 0.41
CLDN6P56747 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC17.6■□□□□ 0.41
CLDN6P56747 FAM215A-202ENST00000632077 792 ntBASIC17.6■□□□□ 0.41
CLDN6P56747 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CLDN6P56747 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN6P56747 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN6P56747 DKK1-201ENST00000373970 1790 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN6P56747 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.6■□□□□ 0.41
CLDN6P56747 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.6■□□□□ 0.41
CLDN6P56747 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC17.6■□□□□ 0.41
CLDN6P56747 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN6P56747 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC17.6■□□□□ 0.41
CLDN6P56747 PTPRJ-207ENST00000613246 7851 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
CLDN6P56747 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
CLDN6P56747 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN6P56747 TMEM132A-202ENST00000453848 3346 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
CLDN6P56747 PPFIA1-201ENST00000253925 5234 ntAPPRIS P4 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN6P56747 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN6P56747 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN6P56747 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN6P56747 HSD3B7-202ENST00000297679 2172 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN6P56747 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.59■□□□□ 0.41
CLDN6P56747 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN6P56747 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN6P56747 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC17.59■□□□□ 0.41
CLDN6P56747 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN6P56747 PDIA2-202ENST00000404312 1575 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CLDN6P56747 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN6P56747 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN6P56747 RFXANK-202ENST00000392324 1059 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN6P56747 RCN1P2-201ENST00000398357 915 ntBASIC17.59■□□□□ 0.41
CLDN6P56747 POM121L3P-201ENST00000419331 1163 ntBASIC17.59■□□□□ 0.41
CLDN6P56747 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC17.59■□□□□ 0.41
CLDN6P56747 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.59■□□□□ 0.41
CLDN6P56747 AL807752.7-201ENST00000471521 989 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
CLDN6P56747 AC093909.1-201ENST00000504731 1122 ntBASIC17.59■□□□□ 0.41
CLDN6P56747 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.59■□□□□ 0.41
CLDN6P56747 ANAPC11-210ENST00000574924 722 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN6P56747 PIN1-206ENST00000587625 878 ntTSL 2 BASIC17.59■□□□□ 0.41
CLDN6P56747 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC17.59■□□□□ 0.41
CLDN6P56747 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN6P56747 AC012615.5-201ENST00000592720 581 ntTSL 4 BASIC17.59■□□□□ 0.41
CLDN6P56747 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
CLDN6P56747 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN6P56747 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN6P56747 AC114341.1-201ENST00000618070 349 ntBASIC17.59■□□□□ 0.41
CLDN6P56747 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
CLDN6P56747 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms