Protein–RNA interactions for Protein: P20333

TNFRSF1B, Tumor necrosis factor receptor superfamily member 1B, humanhuman

Predictions only

Length 461 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1BP20333 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
TNFRSF1BP20333 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC17.1■□□□□ 0.33
TNFRSF1BP20333 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TNFRSF1BP20333 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TNFRSF1BP20333 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC17.1■□□□□ 0.33
TNFRSF1BP20333 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
TNFRSF1BP20333 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC17.1■□□□□ 0.33
TNFRSF1BP20333 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.1■□□□□ 0.33
TNFRSF1BP20333 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC17.1■□□□□ 0.33
TNFRSF1BP20333 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.1■□□□□ 0.33
TNFRSF1BP20333 ENTPD2-202ENST00000355097 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TNFRSF1BP20333 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
TNFRSF1BP20333 MTFP1-202ENST00000355143 891 ntTSL 2 BASIC17.1■□□□□ 0.33
TNFRSF1BP20333 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TNFRSF1BP20333 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC17.1■□□□□ 0.33
TNFRSF1BP20333 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TNFRSF1BP20333 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
TNFRSF1BP20333 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC17.1■□□□□ 0.33
TNFRSF1BP20333 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.1■□□□□ 0.33
TNFRSF1BP20333 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.1■□□□□ 0.33
TNFRSF1BP20333 AC073195.1-201ENST00000607241 877 ntBASIC17.1■□□□□ 0.33
TNFRSF1BP20333 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
TNFRSF1BP20333 NDFIP1-201ENST00000253814 3851 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TNFRSF1BP20333 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.1■□□□□ 0.33
TNFRSF1BP20333 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TNFRSF1BP20333 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
TNFRSF1BP20333 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
TNFRSF1BP20333 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC17.1■□□□□ 0.33
TNFRSF1BP20333 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
TNFRSF1BP20333 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
TNFRSF1BP20333 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC17.1■□□□□ 0.33
TNFRSF1BP20333 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
TNFRSF1BP20333 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
TNFRSF1BP20333 AL096828.2-201ENST00000567259 1965 ntBASIC17.09■□□□□ 0.33
TNFRSF1BP20333 RAI2-201ENST00000331511 2317 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
TNFRSF1BP20333 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TNFRSF1BP20333 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
TNFRSF1BP20333 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TNFRSF1BP20333 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TNFRSF1BP20333 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
TNFRSF1BP20333 AL023284.2-201ENST00000405850 579 ntBASIC17.09■□□□□ 0.33
TNFRSF1BP20333 FAM197Y1-201ENST00000421178 764 ntBASIC17.09■□□□□ 0.33
TNFRSF1BP20333 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TNFRSF1BP20333 FAM86C2P-201ENST00000525180 435 ntTSL 4 BASIC17.09■□□□□ 0.33
TNFRSF1BP20333 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TNFRSF1BP20333 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
TNFRSF1BP20333 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.09■□□□□ 0.33
TNFRSF1BP20333 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TNFRSF1BP20333 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
TNFRSF1BP20333 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC17.09■□□□□ 0.33
TNFRSF1BP20333 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TNFRSF1BP20333 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TNFRSF1BP20333 THEG-201ENST00000342640 1877 ntAPPRIS P4 TSL 1 (best) BASIC17.09■□□□□ 0.33
TNFRSF1BP20333 PODN-203ENST00000395871 2744 ntTSL 5 BASIC17.09■□□□□ 0.33
TNFRSF1BP20333 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TNFRSF1BP20333 AC106820.2-201ENST00000563775 3264 ntBASIC17.09■□□□□ 0.33
TNFRSF1BP20333 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TNFRSF1BP20333 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
TNFRSF1BP20333 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
TNFRSF1BP20333 KAT2A-201ENST00000225916 3109 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TNFRSF1BP20333 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
TNFRSF1BP20333 CPT2-208ENST00000636891 2746 ntTSL 5 BASIC17.08■□□□□ 0.33
TNFRSF1BP20333 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
TNFRSF1BP20333 MUS81-215ENST00000533035 2180 ntTSL 5 BASIC17.08■□□□□ 0.33
TNFRSF1BP20333 CLASRP-203ENST00000391953 1941 ntTSL 2 BASIC17.08■□□□□ 0.33
TNFRSF1BP20333 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.08■□□□□ 0.33
TNFRSF1BP20333 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TNFRSF1BP20333 EFEMP2-210ENST00000528176 1504 ntTSL 5 BASIC17.08■□□□□ 0.32
TNFRSF1BP20333 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.32
TNFRSF1BP20333 CD70-201ENST00000245903 913 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TNFRSF1BP20333 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TNFRSF1BP20333 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TNFRSF1BP20333 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TNFRSF1BP20333 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TNFRSF1BP20333 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.08■□□□□ 0.32
TNFRSF1BP20333 KRT18P41-201ENST00000518924 1277 ntBASIC17.08■□□□□ 0.32
TNFRSF1BP20333 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC17.08■□□□□ 0.32
TNFRSF1BP20333 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC17.08■□□□□ 0.32
TNFRSF1BP20333 AC004771.5-201ENST00000575985 542 ntTSL 4 BASIC17.08■□□□□ 0.32
TNFRSF1BP20333 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC17.08■□□□□ 0.32
TNFRSF1BP20333 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.08■□□□□ 0.32
TNFRSF1BP20333 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
TNFRSF1BP20333 IL27RA-201ENST00000263379 2962 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
TNFRSF1BP20333 AC139713.2-201ENST00000641328 2723 ntBASIC17.08■□□□□ 0.32
TNFRSF1BP20333 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC17.08■□□□□ 0.32
TNFRSF1BP20333 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
TNFRSF1BP20333 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
TNFRSF1BP20333 ETS1-207ENST00000531611 2134 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
TNFRSF1BP20333 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC17.08■□□□□ 0.32
TNFRSF1BP20333 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC17.07■□□□□ 0.32
TNFRSF1BP20333 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC17.07■□□□□ 0.32
TNFRSF1BP20333 TPGS2-219ENST00000593035 1727 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
TNFRSF1BP20333 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
TNFRSF1BP20333 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
TNFRSF1BP20333 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TNFRSF1BP20333 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
TNFRSF1BP20333 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TNFRSF1BP20333 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.07■□□□□ 0.32
TNFRSF1BP20333 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
TNFRSF1BP20333 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms