Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ERCC3P19447 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC21.25■□□□□ 0.99
ERCC3P19447 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC21.25■□□□□ 0.99
ERCC3P19447 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
ERCC3P19447 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC21.25■□□□□ 0.99
ERCC3P19447 AC141586.3-201ENST00000562166 1838 ntBASIC21.25■□□□□ 0.99
ERCC3P19447 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC21.25■□□□□ 0.99
ERCC3P19447 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ERCC3P19447 CYP51A1P1-201ENST00000492267 1507 ntBASIC21.24■□□□□ 0.99
ERCC3P19447 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC21.24■□□□□ 0.99
ERCC3P19447 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ERCC3P19447 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ERCC3P19447 ARMC6-202ENST00000392335 2383 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ERCC3P19447 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC21.24■□□□□ 0.99
ERCC3P19447 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ERCC3P19447 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ERCC3P19447 AL049812.1-201ENST00000432563 2267 ntBASIC21.24■□□□□ 0.99
ERCC3P19447 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ERCC3P19447 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ERCC3P19447 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC21.24■□□□□ 0.99
ERCC3P19447 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ERCC3P19447 AC079781.3-201ENST00000449110 356 ntBASIC21.24■□□□□ 0.99
ERCC3P19447 AC074051.2-201ENST00000565115 352 ntBASIC21.24■□□□□ 0.99
ERCC3P19447 TK1-205ENST00000590862 642 ntTSL 3 BASIC21.24■□□□□ 0.99
ERCC3P19447 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ERCC3P19447 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
ERCC3P19447 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC21.24■□□□□ 0.99
ERCC3P19447 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC21.24■□□□□ 0.99
ERCC3P19447 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
ERCC3P19447 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC21.24■□□□□ 0.99
ERCC3P19447 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC21.24■□□□□ 0.99
ERCC3P19447 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
ERCC3P19447 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC21.23■□□□□ 0.99
ERCC3P19447 AC233702.3-201ENST00000578656 1387 ntBASIC21.23■□□□□ 0.99
ERCC3P19447 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC21.23■□□□□ 0.99
ERCC3P19447 SPHK2-211ENST00000600537 2136 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
ERCC3P19447 TUBA3C-201ENST00000400113 1551 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
ERCC3P19447 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ERCC3P19447 AL020996.1-203ENST00000536896 2307 ntBASIC21.23■□□□□ 0.99
ERCC3P19447 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ERCC3P19447 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC21.23■□□□□ 0.99
ERCC3P19447 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ERCC3P19447 LINC00167-201ENST00000530583 1419 ntBASIC21.23■□□□□ 0.99
ERCC3P19447 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ERCC3P19447 IGHGP-201ENST00000390555 1178 ntBASIC21.23■□□□□ 0.99
ERCC3P19447 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC21.23■□□□□ 0.99
ERCC3P19447 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC21.23■□□□□ 0.99
ERCC3P19447 TEN1-204ENST00000588202 862 ntTSL 3 BASIC21.23■□□□□ 0.99
ERCC3P19447 LINC01711-201ENST00000598340 967 ntBASIC21.23■□□□□ 0.99
ERCC3P19447 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC21.23■□□□□ 0.99
ERCC3P19447 AC138894.3-201ENST00000603787 634 ntBASIC21.23■□□□□ 0.99
ERCC3P19447 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC21.23■□□□□ 0.99
ERCC3P19447 AC068587.9-201ENST00000641814 219 ntBASIC21.23■□□□□ 0.99
ERCC3P19447 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ERCC3P19447 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ERCC3P19447 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC21.23■□□□□ 0.99
ERCC3P19447 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC21.23■□□□□ 0.99
ERCC3P19447 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ERCC3P19447 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
ERCC3P19447 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC21.23■□□□□ 0.99
ERCC3P19447 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC21.23■□□□□ 0.99
ERCC3P19447 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
ERCC3P19447 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC21.23■□□□□ 0.99
ERCC3P19447 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ERCC3P19447 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC21.22■□□□□ 0.99
ERCC3P19447 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC21.22■□□□□ 0.99
ERCC3P19447 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC21.22■□□□□ 0.99
ERCC3P19447 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ERCC3P19447 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ERCC3P19447 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ERCC3P19447 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC21.22■□□□□ 0.99
ERCC3P19447 PSMA7-203ENST00000370873 996 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ERCC3P19447 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC21.22■□□□□ 0.99
ERCC3P19447 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ERCC3P19447 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ERCC3P19447 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ERCC3P19447 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC21.22■□□□□ 0.99
ERCC3P19447 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC21.22■□□□□ 0.99
ERCC3P19447 AC138932.1-201ENST00000534164 6830 ntBASIC21.22■□□□□ 0.99
ERCC3P19447 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
ERCC3P19447 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
ERCC3P19447 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC21.22■□□□□ 0.99
ERCC3P19447 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ERCC3P19447 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
ERCC3P19447 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC21.22■□□□□ 0.99
ERCC3P19447 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
ERCC3P19447 LRRC4B-202ENST00000599957 3019 ntAPPRIS P1 TSL 3 BASIC21.21■□□□□ 0.99
ERCC3P19447 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC21.21■□□□□ 0.99
ERCC3P19447 CDH24-205ENST00000554034 2759 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ERCC3P19447 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
ERCC3P19447 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
ERCC3P19447 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
ERCC3P19447 Metazoa_SRP.28-201ENST00000366402 260 ntBASIC21.21■□□□□ 0.99
ERCC3P19447 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC21.21■□□□□ 0.99
ERCC3P19447 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC21.21■□□□□ 0.99
ERCC3P19447 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC21.21■□□□□ 0.99
ERCC3P19447 AL160237.2-201ENST00000556165 472 ntBASIC21.21■□□□□ 0.99
ERCC3P19447 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
ERCC3P19447 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC21.21■□□□□ 0.99
ERCC3P19447 AC024563.2-201ENST00000603282 481 ntBASIC21.21■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms