Protein–RNA interactions for Protein: O15439

ABCC4, Multidrug resistance-associated protein 4, humanhuman

Predictions only

Length 1,325 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCC4O15439 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
ABCC4O15439 BICD1-207ENST00000551848 1962 ntBASIC23.37■■□□□ 1.33
ABCC4O15439 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
ABCC4O15439 CDK10-202ENST00000353379 1798 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
ABCC4O15439 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
ABCC4O15439 NTRK1-201ENST00000358660 2492 ntAPPRIS ALT2 TSL 2 BASIC23.37■■□□□ 1.33
ABCC4O15439 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC23.37■■□□□ 1.33
ABCC4O15439 C6orf136-203ENST00000376473 1402 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
ABCC4O15439 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC23.37■■□□□ 1.33
ABCC4O15439 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC23.37■■□□□ 1.33
ABCC4O15439 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC23.37■■□□□ 1.33
ABCC4O15439 AC099343.3-201ENST00000605834 2503 ntBASIC23.37■■□□□ 1.33
ABCC4O15439 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC23.37■■□□□ 1.33
ABCC4O15439 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC23.37■■□□□ 1.33
ABCC4O15439 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC23.37■■□□□ 1.33
ABCC4O15439 COQ9-210ENST00000567072 1482 ntTSL 3 BASIC23.36■■□□□ 1.33
ABCC4O15439 MCOLN2-201ENST00000284027 1729 ntAPPRIS P1 TSL 5 BASIC23.36■■□□□ 1.33
ABCC4O15439 NIFK-201ENST00000285814 1734 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
ABCC4O15439 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC23.36■■□□□ 1.33
ABCC4O15439 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC23.36■■□□□ 1.33
ABCC4O15439 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC23.36■■□□□ 1.33
ABCC4O15439 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC23.36■■□□□ 1.33
ABCC4O15439 MCFD2-203ENST00000409147 671 ntTSL 2 BASIC23.36■■□□□ 1.33
ABCC4O15439 AC246785.2-201ENST00000432512 513 ntBASIC23.36■■□□□ 1.33
ABCC4O15439 BX276092.5-203ENST00000456199 560 ntBASIC23.36■■□□□ 1.33
ABCC4O15439 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC23.36■■□□□ 1.33
ABCC4O15439 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC23.36■■□□□ 1.33
ABCC4O15439 ALDOC-201ENST00000226253 1982 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
ABCC4O15439 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
ABCC4O15439 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC23.36■■□□□ 1.33
ABCC4O15439 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC23.36■■□□□ 1.33
ABCC4O15439 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
ABCC4O15439 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
ABCC4O15439 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
ABCC4O15439 PDE9A-209ENST00000398227 1606 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
ABCC4O15439 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC23.36■■□□□ 1.33
ABCC4O15439 IQCJ-SCHIP1-207ENST00000638749 2633 ntAPPRIS P3 TSL 1 (best) BASIC23.36■■□□□ 1.33
ABCC4O15439 ENOPH1-202ENST00000505846 1689 ntTSL 1 (best) BASIC23.36■■□□□ 1.33
ABCC4O15439 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC23.36■■□□□ 1.33
ABCC4O15439 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC23.36■■□□□ 1.33
ABCC4O15439 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC23.35■■□□□ 1.33
ABCC4O15439 HLA-F-220ENST00000434407 884 ntBASIC23.35■■□□□ 1.33
ABCC4O15439 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC23.35■■□□□ 1.33
ABCC4O15439 SDR39U1-202ENST00000538105 1041 ntTSL 2 BASIC23.35■■□□□ 1.33
ABCC4O15439 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC23.35■■□□□ 1.33
ABCC4O15439 MAP4K4-210ENST00000425019 4403 ntTSL 5 BASIC23.35■■□□□ 1.33
ABCC4O15439 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC23.35■■□□□ 1.33
ABCC4O15439 AL162741.1-201ENST00000565563 1558 ntBASIC23.35■■□□□ 1.33
ABCC4O15439 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC23.35■■□□□ 1.33
ABCC4O15439 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
ABCC4O15439 NEFHP1-201ENST00000412845 2629 ntBASIC23.35■■□□□ 1.33
ABCC4O15439 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC23.35■■□□□ 1.33
ABCC4O15439 SUFU-201ENST00000369899 1839 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
ABCC4O15439 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC23.35■■□□□ 1.33
ABCC4O15439 HAAO-201ENST00000294973 1265 ntAPPRIS P1 TSL 1 (best) BASIC23.34■■□□□ 1.33
ABCC4O15439 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC23.34■■□□□ 1.33
ABCC4O15439 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC23.34■■□□□ 1.33
ABCC4O15439 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC23.34■■□□□ 1.33
ABCC4O15439 RN7SL510P-201ENST00000581311 263 ntBASIC23.34■■□□□ 1.33
ABCC4O15439 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC23.34■■□□□ 1.33
ABCC4O15439 EEF1D-205ENST00000442189 2207 ntAPPRIS P4 TSL 1 (best) BASIC23.34■■□□□ 1.33
ABCC4O15439 ADK-206ENST00000541550 2222 ntTSL 2 BASIC23.34■■□□□ 1.33
ABCC4O15439 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
ABCC4O15439 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC23.34■■□□□ 1.33
ABCC4O15439 CASP9-210ENST00000546424 4463 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
ABCC4O15439 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
ABCC4O15439 KDM4B-202ENST00000381759 3058 ntTSL 1 (best) BASIC23.34■■□□□ 1.33
ABCC4O15439 KCNQ2-205ENST00000360480 2775 ntAPPRIS ALT2 TSL 5 BASIC23.34■■□□□ 1.33
ABCC4O15439 NDUFS7-201ENST00000233627 1039 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
ABCC4O15439 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC23.33■■□□□ 1.33
ABCC4O15439 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
ABCC4O15439 SNCG-201ENST00000348795 684 ntTSL 2 BASIC23.33■■□□□ 1.33
ABCC4O15439 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
ABCC4O15439 PPIH-202ENST00000372549 327 ntTSL 3 BASIC23.33■■□□□ 1.33
ABCC4O15439 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
ABCC4O15439 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
ABCC4O15439 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC23.33■■□□□ 1.33
ABCC4O15439 CLDN7-204ENST00000571881 735 ntTSL 3 BASIC23.33■■□□□ 1.33
ABCC4O15439 AP002414.4-201ENST00000589764 1148 ntBASIC23.33■■□□□ 1.33
ABCC4O15439 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC23.33■■□□□ 1.33
ABCC4O15439 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
ABCC4O15439 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC23.33■■□□□ 1.33
ABCC4O15439 CNR1-203ENST00000369501 6031 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
ABCC4O15439 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC23.33■■□□□ 1.33
ABCC4O15439 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.33
ABCC4O15439 ESPNP-201ENST00000270691 2015 ntBASIC23.33■■□□□ 1.33
ABCC4O15439 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC23.33■■□□□ 1.33
ABCC4O15439 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC23.33■■□□□ 1.33
ABCC4O15439 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
ABCC4O15439 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
ABCC4O15439 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC23.33■■□□□ 1.33
ABCC4O15439 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
ABCC4O15439 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
ABCC4O15439 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
ABCC4O15439 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC23.33■■□□□ 1.32
ABCC4O15439 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC23.33■■□□□ 1.32
ABCC4O15439 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC23.33■■□□□ 1.32
ABCC4O15439 AC008738.3-201ENST00000589932 659 ntTSL 2 BASIC23.33■■□□□ 1.32
ABCC4O15439 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.32
ABCC4O15439 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC23.33■■□□□ 1.32
Retrieved 100 of 98,524 protein–RNA pairs in 29.5 ms