Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TNFRSF11BO00300 LGALS12-203ENST00000394618 1618 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
TNFRSF11BO00300 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.03■□□□□ 0.32
TNFRSF11BO00300 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
TNFRSF11BO00300 AC012313.1-201ENST00000593393 3059 ntBASIC17.03■□□□□ 0.32
TNFRSF11BO00300 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TNFRSF11BO00300 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TNFRSF11BO00300 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TNFRSF11BO00300 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TNFRSF11BO00300 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC17.03■□□□□ 0.32
TNFRSF11BO00300 HOXB1-201ENST00000239174 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TNFRSF11BO00300 RGN-204ENST00000457380 2041 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TNFRSF11BO00300 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TNFRSF11BO00300 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TNFRSF11BO00300 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
TNFRSF11BO00300 RAI1-201ENST00000353383 7662 ntAPPRIS P2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TNFRSF11BO00300 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TNFRSF11BO00300 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
TNFRSF11BO00300 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC17.03■□□□□ 0.32
TNFRSF11BO00300 KRASP1-201ENST00000407852 552 ntBASIC17.03■□□□□ 0.32
TNFRSF11BO00300 AC091390.4-202ENST00000476426 537 ntBASIC17.03■□□□□ 0.32
TNFRSF11BO00300 KRT18P41-201ENST00000518924 1277 ntBASIC17.03■□□□□ 0.32
TNFRSF11BO00300 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC17.03■□□□□ 0.32
TNFRSF11BO00300 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
TNFRSF11BO00300 AL023875.1-201ENST00000640777 796 ntBASIC17.03■□□□□ 0.32
TNFRSF11BO00300 C1orf159-204ENST00000379339 2429 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
TNFRSF11BO00300 DHRS2-201ENST00000250383 1705 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
TNFRSF11BO00300 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TNFRSF11BO00300 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
TNFRSF11BO00300 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC17.03■□□□□ 0.32
TNFRSF11BO00300 MIB2-201ENST00000355826 3290 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TNFRSF11BO00300 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TNFRSF11BO00300 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC17.03■□□□□ 0.32
TNFRSF11BO00300 SLC12A9-215ENST00000540482 2269 ntTSL 2 BASIC17.03■□□□□ 0.32
TNFRSF11BO00300 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC17.03■□□□□ 0.32
TNFRSF11BO00300 CEP83-AS1-201ENST00000623122 2482 ntBASIC17.03■□□□□ 0.32
TNFRSF11BO00300 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.03■□□□□ 0.32
TNFRSF11BO00300 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
TNFRSF11BO00300 SLC23A3-207ENST00000455516 2048 ntTSL 2 BASIC17.03■□□□□ 0.32
TNFRSF11BO00300 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TNFRSF11BO00300 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TNFRSF11BO00300 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
TNFRSF11BO00300 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TNFRSF11BO00300 STRN4-201ENST00000263280 3210 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
TNFRSF11BO00300 PRORSD1P-202ENST00000563365 2154 ntBASIC17.02■□□□□ 0.32
TNFRSF11BO00300 XRCC3-201ENST00000352127 2563 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TNFRSF11BO00300 RNF222-201ENST00000344001 2786 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
TNFRSF11BO00300 ZNF697-201ENST00000421812 5041 ntAPPRIS P1 TSL 3 BASIC17.02■□□□□ 0.32
TNFRSF11BO00300 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TNFRSF11BO00300 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC17.02■□□□□ 0.32
TNFRSF11BO00300 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TNFRSF11BO00300 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TNFRSF11BO00300 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
TNFRSF11BO00300 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TNFRSF11BO00300 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
TNFRSF11BO00300 CD14-201ENST00000302014 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TNFRSF11BO00300 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.02■□□□□ 0.32
TNFRSF11BO00300 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TNFRSF11BO00300 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.02■□□□□ 0.32
TNFRSF11BO00300 AC239809.2-201ENST00000415381 517 ntBASIC17.02■□□□□ 0.32
TNFRSF11BO00300 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC17.02■□□□□ 0.32
TNFRSF11BO00300 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC17.02■□□□□ 0.32
TNFRSF11BO00300 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.02■□□□□ 0.32
TNFRSF11BO00300 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
TNFRSF11BO00300 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC17.02■□□□□ 0.32
TNFRSF11BO00300 WIF1-201ENST00000286574 2238 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
TNFRSF11BO00300 AMDHD2-203ENST00000413459 2049 ntTSL 2 BASIC17.02■□□□□ 0.32
TNFRSF11BO00300 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC17.02■□□□□ 0.31
TNFRSF11BO00300 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TNFRSF11BO00300 PTP4A1-201ENST00000370651 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
TNFRSF11BO00300 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC17.02■□□□□ 0.31
TNFRSF11BO00300 AL096828.2-201ENST00000567259 1965 ntBASIC17.02■□□□□ 0.31
TNFRSF11BO00300 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.31
TNFRSF11BO00300 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.02■□□□□ 0.31
TNFRSF11BO00300 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
TNFRSF11BO00300 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC17.01■□□□□ 0.31
TNFRSF11BO00300 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
TNFRSF11BO00300 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
TNFRSF11BO00300 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TNFRSF11BO00300 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC17.01■□□□□ 0.31
TNFRSF11BO00300 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TNFRSF11BO00300 IPMK-201ENST00000373935 6133 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TNFRSF11BO00300 ACSS2-201ENST00000253382 2925 ntTSL 2 BASIC17.01■□□□□ 0.31
TNFRSF11BO00300 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TNFRSF11BO00300 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC17.01■□□□□ 0.31
TNFRSF11BO00300 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TNFRSF11BO00300 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TNFRSF11BO00300 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
TNFRSF11BO00300 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TNFRSF11BO00300 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TNFRSF11BO00300 SNCG-201ENST00000348795 684 ntTSL 2 BASIC17.01■□□□□ 0.31
TNFRSF11BO00300 ENSA-205ENST00000361532 792 ntTSL 2 BASIC17.01■□□□□ 0.31
TNFRSF11BO00300 DUSP23-201ENST00000368107 756 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
TNFRSF11BO00300 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC17.01■□□□□ 0.31
TNFRSF11BO00300 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.01■□□□□ 0.31
TNFRSF11BO00300 AP003097.1-201ENST00000530657 1135 ntBASIC17.01■□□□□ 0.31
TNFRSF11BO00300 CFL2-205ENST00000555765 632 ntTSL 2 BASIC17.01■□□□□ 0.31
TNFRSF11BO00300 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC17.01■□□□□ 0.31
TNFRSF11BO00300 AC142086.2-201ENST00000569753 217 ntBASIC17.01■□□□□ 0.31
TNFRSF11BO00300 FCGRT-201ENST00000221466 1798 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms