Protein–RNA interactions for Protein: Q9CXF7

Chd1l, Chromodomain-helicase-DNA-binding protein 1-like, mousemouse

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd1lQ9CXF7 Iscu-201ENSMUST00000026937 957 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chd1lQ9CXF7 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Chd1lQ9CXF7 Arhgef9-217ENSMUST00000197364 1796 ntTSL 5 BASIC17.57■□□□□ 0.4
Chd1lQ9CXF7 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Chd1lQ9CXF7 Pak2-201ENSMUST00000023467 5741 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chd1lQ9CXF7 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC17.57■□□□□ 0.4
Chd1lQ9CXF7 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chd1lQ9CXF7 Zfp574-201ENSMUST00000053410 3145 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chd1lQ9CXF7 Samm50-201ENSMUST00000023071 1673 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chd1lQ9CXF7 Slc24a3-202ENSMUST00000110007 4048 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chd1lQ9CXF7 Hgfac-201ENSMUST00000030985 2135 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chd1lQ9CXF7 Zfp13-201ENSMUST00000057029 2139 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chd1lQ9CXF7 Acot3-201ENSMUST00000021653 3431 ntAPPRIS P3 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chd1lQ9CXF7 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
Chd1lQ9CXF7 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chd1lQ9CXF7 Kcnma1-228ENSMUST00000224468 3753 ntAPPRIS ALT2 BASIC17.57■□□□□ 0.4
Chd1lQ9CXF7 Nes-203ENSMUST00000160694 5958 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
Chd1lQ9CXF7 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chd1lQ9CXF7 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chd1lQ9CXF7 Gm15512-201ENSMUST00000137359 2257 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Chd1lQ9CXF7 Gm26669-201ENSMUST00000181323 1808 ntTSL 5 BASIC17.56■□□□□ 0.4
Chd1lQ9CXF7 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chd1lQ9CXF7 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chd1lQ9CXF7 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chd1lQ9CXF7 Gmppa-202ENSMUST00000113584 1692 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Chd1lQ9CXF7 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC17.56■□□□□ 0.4
Chd1lQ9CXF7 Msx3-201ENSMUST00000055353 2356 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Chd1lQ9CXF7 Gm6257-201ENSMUST00000163864 910 ntBASIC17.56■□□□□ 0.4
Chd1lQ9CXF7 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chd1lQ9CXF7 Gm28626-201ENSMUST00000187004 520 ntTSL 2 BASIC17.56■□□□□ 0.4
Chd1lQ9CXF7 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC17.56■□□□□ 0.4
Chd1lQ9CXF7 Sox6os-201ENSMUST00000032900 420 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Chd1lQ9CXF7 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC17.56■□□□□ 0.4
Chd1lQ9CXF7 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chd1lQ9CXF7 Gm7579-201ENSMUST00000097943 732 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Chd1lQ9CXF7 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chd1lQ9CXF7 Ints3-203ENSMUST00000196530 3778 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chd1lQ9CXF7 Sowaha-201ENSMUST00000104955 3702 ntAPPRIS P1 BASIC17.56■□□□□ 0.4
Chd1lQ9CXF7 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Chd1lQ9CXF7 Las1l-202ENSMUST00000113864 2581 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
Chd1lQ9CXF7 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Chd1lQ9CXF7 Suco-201ENSMUST00000048377 6327 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chd1lQ9CXF7 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chd1lQ9CXF7 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chd1lQ9CXF7 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
Chd1lQ9CXF7 Arhgef18-201ENSMUST00000004684 5271 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
Chd1lQ9CXF7 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chd1lQ9CXF7 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chd1lQ9CXF7 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chd1lQ9CXF7 Tle1-203ENSMUST00000074216 4369 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
Chd1lQ9CXF7 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chd1lQ9CXF7 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chd1lQ9CXF7 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chd1lQ9CXF7 Gm12134-201ENSMUST00000122109 520 ntBASIC17.55■□□□□ 0.4
Chd1lQ9CXF7 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.55■□□□□ 0.4
Chd1lQ9CXF7 B430219N15Rik-201ENSMUST00000147230 835 ntTSL 2 BASIC17.55■□□□□ 0.4
Chd1lQ9CXF7 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chd1lQ9CXF7 Ndufs7-201ENSMUST00000020361 758 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chd1lQ9CXF7 Gm45618-201ENSMUST00000209890 660 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
Chd1lQ9CXF7 Gm7367-201ENSMUST00000057611 492 ntBASIC17.55■□□□□ 0.4
Chd1lQ9CXF7 Tmem35b-201ENSMUST00000094712 1120 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chd1lQ9CXF7 Pdpk1-201ENSMUST00000052462 1832 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chd1lQ9CXF7 AC159649.2-201ENSMUST00000222984 3223 ntBASIC17.55■□□□□ 0.4
Chd1lQ9CXF7 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chd1lQ9CXF7 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chd1lQ9CXF7 Pbx3-201ENSMUST00000040638 2587 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chd1lQ9CXF7 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chd1lQ9CXF7 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC17.55■□□□□ 0.4
Chd1lQ9CXF7 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chd1lQ9CXF7 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chd1lQ9CXF7 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chd1lQ9CXF7 Dmtn-201ENSMUST00000022694 5418 ntAPPRIS ALT1 TSL 5 BASIC17.55■□□□□ 0.4
Chd1lQ9CXF7 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chd1lQ9CXF7 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
Chd1lQ9CXF7 Tekt1-203ENSMUST00000108503 1397 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chd1lQ9CXF7 Lpcat1-208ENSMUST00000223060 2141 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Chd1lQ9CXF7 Sema6b-202ENSMUST00000167545 3847 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chd1lQ9CXF7 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Chd1lQ9CXF7 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chd1lQ9CXF7 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chd1lQ9CXF7 Caprin2-201ENSMUST00000072324 2952 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Chd1lQ9CXF7 Ralgds-203ENSMUST00000113893 3683 ntAPPRIS ALT2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chd1lQ9CXF7 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC17.54■□□□□ 0.4
Chd1lQ9CXF7 Dym-201ENSMUST00000039608 2471 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chd1lQ9CXF7 Cbarp-215ENSMUST00000170219 2941 ntAPPRIS P2 TSL 5 BASIC17.54■□□□□ 0.4
Chd1lQ9CXF7 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chd1lQ9CXF7 Wwp2-205ENSMUST00000212543 1996 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Chd1lQ9CXF7 Jtb-202ENSMUST00000119304 878 ntTSL 3 BASIC17.54■□□□□ 0.4
Chd1lQ9CXF7 Gm13474-201ENSMUST00000122466 815 ntBASIC17.54■□□□□ 0.4
Chd1lQ9CXF7 Gm26039-201ENSMUST00000158152 144 ntBASIC17.54■□□□□ 0.4
Chd1lQ9CXF7 Zfp787-204ENSMUST00000207628 576 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
Chd1lQ9CXF7 Sesn1-201ENSMUST00000041438 2600 ntAPPRIS P3 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chd1lQ9CXF7 Myh14-204ENSMUST00000207775 6499 ntAPPRIS ALT2 TSL 5 BASIC17.54■□□□□ 0.4
Chd1lQ9CXF7 Slc10a3-202ENSMUST00000073067 1910 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chd1lQ9CXF7 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chd1lQ9CXF7 Smim1-201ENSMUST00000125533 2568 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chd1lQ9CXF7 Syn2-201ENSMUST00000009538 2708 ntAPPRIS P4 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chd1lQ9CXF7 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
Chd1lQ9CXF7 Ap5m1-205ENSMUST00000227431 3757 ntBASIC17.54■□□□□ 0.4
Chd1lQ9CXF7 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
Retrieved 100 of 76,532 protein–RNA pairs in 23 ms