Protein–RNA interactions for Protein: Q8TBC3

SHKBP1, SH3KBP1-binding protein 1, humanhuman

Predictions only

Length 707 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1Q8TBC3 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC19.33■□□□□ 0.68
SHKBP1Q8TBC3 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
SHKBP1Q8TBC3 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
SHKBP1Q8TBC3 RAPGEF5-203ENST00000405243 2800 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
SHKBP1Q8TBC3 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
SHKBP1Q8TBC3 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
SHKBP1Q8TBC3 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
SHKBP1Q8TBC3 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SHKBP1Q8TBC3 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SHKBP1Q8TBC3 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SHKBP1Q8TBC3 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.32■□□□□ 0.68
SHKBP1Q8TBC3 SOBP-201ENST00000317357 5245 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
SHKBP1Q8TBC3 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
SHKBP1Q8TBC3 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC19.32■□□□□ 0.68
SHKBP1Q8TBC3 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
SHKBP1Q8TBC3 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC19.32■□□□□ 0.68
SHKBP1Q8TBC3 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
SHKBP1Q8TBC3 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SHKBP1Q8TBC3 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SHKBP1Q8TBC3 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.32■□□□□ 0.68
SHKBP1Q8TBC3 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC19.32■□□□□ 0.68
SHKBP1Q8TBC3 TOB2P1-201ENST00000469761 992 ntBASIC19.32■□□□□ 0.68
SHKBP1Q8TBC3 STK32A-AS1-201ENST00000504297 863 ntTSL 3 BASIC19.32■□□□□ 0.68
SHKBP1Q8TBC3 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
SHKBP1Q8TBC3 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
SHKBP1Q8TBC3 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SHKBP1Q8TBC3 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC19.32■□□□□ 0.68
SHKBP1Q8TBC3 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SHKBP1Q8TBC3 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.32■□□□□ 0.68
SHKBP1Q8TBC3 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
SHKBP1Q8TBC3 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SHKBP1Q8TBC3 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SHKBP1Q8TBC3 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SHKBP1Q8TBC3 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC19.32■□□□□ 0.68
SHKBP1Q8TBC3 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SHKBP1Q8TBC3 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
SHKBP1Q8TBC3 AL032819.2-201ENST00000624543 2162 ntBASIC19.32■□□□□ 0.68
SHKBP1Q8TBC3 ATP6V1G2-205ENST00000303892 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
SHKBP1Q8TBC3 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.31■□□□□ 0.68
SHKBP1Q8TBC3 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
SHKBP1Q8TBC3 GRB7-202ENST00000394204 1667 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SHKBP1Q8TBC3 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SHKBP1Q8TBC3 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SHKBP1Q8TBC3 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC19.31■□□□□ 0.68
SHKBP1Q8TBC3 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
SHKBP1Q8TBC3 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC19.31■□□□□ 0.68
SHKBP1Q8TBC3 AC079848.1-202ENST00000507924 444 ntTSL 3 BASIC19.31■□□□□ 0.68
SHKBP1Q8TBC3 AC135586.2-201ENST00000537262 567 ntAPPRIS P1 TSL 4 BASIC19.31■□□□□ 0.68
SHKBP1Q8TBC3 PNN-202ENST00000553331 656 ntTSL 3 BASIC19.31■□□□□ 0.68
SHKBP1Q8TBC3 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.31■□□□□ 0.68
SHKBP1Q8TBC3 RABAC1-208ENST00000601078 728 ntTSL 3 BASIC19.31■□□□□ 0.68
SHKBP1Q8TBC3 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC19.31■□□□□ 0.68
SHKBP1Q8TBC3 AC005332.8-201ENST00000622750 2735 ntBASIC19.31■□□□□ 0.68
SHKBP1Q8TBC3 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC19.31■□□□□ 0.68
SHKBP1Q8TBC3 KCNIP4-205ENST00000382152 1767 ntTSL 5 BASIC19.31■□□□□ 0.68
SHKBP1Q8TBC3 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SHKBP1Q8TBC3 RNF135-201ENST00000324689 1905 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
SHKBP1Q8TBC3 AC005082.1-201ENST00000413042 2259 ntBASIC19.31■□□□□ 0.68
SHKBP1Q8TBC3 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
SHKBP1Q8TBC3 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
SHKBP1Q8TBC3 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
SHKBP1Q8TBC3 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
SHKBP1Q8TBC3 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC19.3■□□□□ 0.68
SHKBP1Q8TBC3 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC19.3■□□□□ 0.68
SHKBP1Q8TBC3 Z98044.1-201ENST00000632503 1764 ntBASIC19.3■□□□□ 0.68
SHKBP1Q8TBC3 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
SHKBP1Q8TBC3 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SHKBP1Q8TBC3 AP2S1-202ENST00000352203 793 ntTSL 2 BASIC19.3■□□□□ 0.68
SHKBP1Q8TBC3 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC19.3■□□□□ 0.68
SHKBP1Q8TBC3 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.3■□□□□ 0.68
SHKBP1Q8TBC3 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SHKBP1Q8TBC3 AP2S1-204ENST00000597020 707 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SHKBP1Q8TBC3 IFNL4P1-201ENST00000607083 540 ntBASIC19.3■□□□□ 0.68
SHKBP1Q8TBC3 AL732292.2-201ENST00000609649 430 ntBASIC19.3■□□□□ 0.68
SHKBP1Q8TBC3 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC19.3■□□□□ 0.68
SHKBP1Q8TBC3 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.3■□□□□ 0.68
SHKBP1Q8TBC3 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
SHKBP1Q8TBC3 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
SHKBP1Q8TBC3 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.29■□□□□ 0.68
SHKBP1Q8TBC3 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SHKBP1Q8TBC3 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC19.29■□□□□ 0.68
SHKBP1Q8TBC3 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
SHKBP1Q8TBC3 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SHKBP1Q8TBC3 FSCN2-201ENST00000334850 1551 ntTSL 5 BASIC19.29■□□□□ 0.68
SHKBP1Q8TBC3 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC19.29■□□□□ 0.68
SHKBP1Q8TBC3 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SHKBP1Q8TBC3 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
SHKBP1Q8TBC3 AC004870.1-201ENST00000315132 882 ntBASIC19.29■□□□□ 0.68
SHKBP1Q8TBC3 TSPY19P-201ENST00000418461 509 ntBASIC19.29■□□□□ 0.68
SHKBP1Q8TBC3 TSPY18P-201ENST00000441642 509 ntBASIC19.29■□□□□ 0.68
SHKBP1Q8TBC3 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC19.29■□□□□ 0.68
SHKBP1Q8TBC3 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC19.29■□□□□ 0.68
SHKBP1Q8TBC3 AC090616.6-201ENST00000582640 721 ntBASIC19.29■□□□□ 0.68
SHKBP1Q8TBC3 TEN1-204ENST00000588202 862 ntTSL 3 BASIC19.29■□□□□ 0.68
SHKBP1Q8TBC3 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.29■□□□□ 0.68
SHKBP1Q8TBC3 GPR32P1-201ENST00000601788 811 ntBASIC19.29■□□□□ 0.68
SHKBP1Q8TBC3 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
SHKBP1Q8TBC3 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
SHKBP1Q8TBC3 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
SHKBP1Q8TBC3 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC19.29■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 41 ms