Protein–RNA interactions for Protein: Q8N5U0

C11orf42, Uncharacterized protein C11orf42, humanhuman

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf42Q8N5U0 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
C11orf42Q8N5U0 AL365232.1-201ENST00000423730 1636 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
C11orf42Q8N5U0 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
C11orf42Q8N5U0 LYPD3-201ENST00000244333 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
C11orf42Q8N5U0 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
C11orf42Q8N5U0 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
C11orf42Q8N5U0 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC15.33■□□□□ 0.04
C11orf42Q8N5U0 CFL2-205ENST00000555765 632 ntTSL 2 BASIC15.33■□□□□ 0.04
C11orf42Q8N5U0 TK2-213ENST00000563369 882 ntTSL 5 BASIC15.33■□□□□ 0.04
C11orf42Q8N5U0 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC15.33■□□□□ 0.04
C11orf42Q8N5U0 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC15.33■□□□□ 0.04
C11orf42Q8N5U0 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC15.33■□□□□ 0.04
C11orf42Q8N5U0 RAVER2-202ENST00000371072 4362 ntAPPRIS P2 TSL 1 (best) BASIC15.33■□□□□ 0.04
C11orf42Q8N5U0 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
C11orf42Q8N5U0 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
C11orf42Q8N5U0 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
C11orf42Q8N5U0 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
C11orf42Q8N5U0 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
C11orf42Q8N5U0 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
C11orf42Q8N5U0 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC15.33■□□□□ 0.04
C11orf42Q8N5U0 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
C11orf42Q8N5U0 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
C11orf42Q8N5U0 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
C11orf42Q8N5U0 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
C11orf42Q8N5U0 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
C11orf42Q8N5U0 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC15.32■□□□□ 0.04
C11orf42Q8N5U0 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
C11orf42Q8N5U0 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
C11orf42Q8N5U0 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
C11orf42Q8N5U0 AC012615.6-201ENST00000593201 1697 ntTSL 2 BASIC15.32■□□□□ 0.04
C11orf42Q8N5U0 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
C11orf42Q8N5U0 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC15.32■□□□□ 0.04
C11orf42Q8N5U0 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC15.32■□□□□ 0.04
C11orf42Q8N5U0 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
C11orf42Q8N5U0 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
C11orf42Q8N5U0 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC15.32■□□□□ 0.04
C11orf42Q8N5U0 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
C11orf42Q8N5U0 CACNA1I-201ENST00000401624 6740 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
C11orf42Q8N5U0 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
C11orf42Q8N5U0 CDHR4-201ENST00000343366 1188 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
C11orf42Q8N5U0 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC15.32■□□□□ 0.04
C11orf42Q8N5U0 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC15.32■□□□□ 0.04
C11orf42Q8N5U0 AC092865.7-201ENST00000641832 219 ntBASIC15.32■□□□□ 0.04
C11orf42Q8N5U0 NIPAL2-202ENST00000430223 4496 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
C11orf42Q8N5U0 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
C11orf42Q8N5U0 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC15.32■□□□□ 0.04
C11orf42Q8N5U0 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
C11orf42Q8N5U0 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC15.32■□□□□ 0.04
C11orf42Q8N5U0 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC15.32■□□□□ 0.04
C11orf42Q8N5U0 EEF1AKMT2-201ENST00000368836 1462 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
C11orf42Q8N5U0 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
C11orf42Q8N5U0 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
C11orf42Q8N5U0 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
C11orf42Q8N5U0 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC15.32■□□□□ 0.04
C11orf42Q8N5U0 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
C11orf42Q8N5U0 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC15.32■□□□□ 0.04
C11orf42Q8N5U0 TNFSF9-201ENST00000245817 1665 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
C11orf42Q8N5U0 CLN3-204ENST00000357857 1720 ntTSL 2 BASIC15.31■□□□□ 0.04
C11orf42Q8N5U0 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
C11orf42Q8N5U0 ACYP2-203ENST00000406041 1913 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
C11orf42Q8N5U0 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
C11orf42Q8N5U0 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
C11orf42Q8N5U0 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
C11orf42Q8N5U0 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
C11orf42Q8N5U0 EFCAB14-201ENST00000371933 5767 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
C11orf42Q8N5U0 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
C11orf42Q8N5U0 AC093503.3-201ENST00000624917 2352 ntBASIC15.31■□□□□ 0.04
C11orf42Q8N5U0 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC15.31■□□□□ 0.04
C11orf42Q8N5U0 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC15.31■□□□□ 0.04
C11orf42Q8N5U0 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
C11orf42Q8N5U0 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
C11orf42Q8N5U0 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC15.31■□□□□ 0.04
C11orf42Q8N5U0 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
C11orf42Q8N5U0 LIN28AP1-201ENST00000429574 405 ntBASIC15.31■□□□□ 0.04
C11orf42Q8N5U0 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC15.31■□□□□ 0.04
C11orf42Q8N5U0 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC15.31■□□□□ 0.04
C11orf42Q8N5U0 AC009947.2-201ENST00000444014 672 ntBASIC15.31■□□□□ 0.04
C11orf42Q8N5U0 RPL39L-203ENST00000455270 653 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
C11orf42Q8N5U0 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC15.31■□□□□ 0.04
C11orf42Q8N5U0 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
C11orf42Q8N5U0 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC15.31■□□□□ 0.04
C11orf42Q8N5U0 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
C11orf42Q8N5U0 CALM3-208ENST00000596362 1203 ntAPPRIS P1 TSL 2 BASIC15.31■□□□□ 0.04
C11orf42Q8N5U0 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC15.31■□□□□ 0.04
C11orf42Q8N5U0 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
C11orf42Q8N5U0 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
C11orf42Q8N5U0 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
C11orf42Q8N5U0 Z98044.1-201ENST00000632503 1764 ntBASIC15.31■□□□□ 0.04
C11orf42Q8N5U0 OSM-201ENST00000215781 1854 ntAPPRIS P3 TSL 1 (best) BASIC15.31■□□□□ 0.04
C11orf42Q8N5U0 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC15.31■□□□□ 0.04
C11orf42Q8N5U0 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
C11orf42Q8N5U0 MSLN-202ENST00000545450 2162 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.04
C11orf42Q8N5U0 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.31■□□□□ 0.04
C11orf42Q8N5U0 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
C11orf42Q8N5U0 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC15.3■□□□□ 0.04
C11orf42Q8N5U0 FKRP-202ENST00000391909 2801 ntAPPRIS P1 TSL 2 BASIC15.3■□□□□ 0.04
C11orf42Q8N5U0 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC15.3■□□□□ 0.04
C11orf42Q8N5U0 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC15.3■□□□□ 0.04
C11orf42Q8N5U0 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
C11orf42Q8N5U0 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.3■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 28.1 ms