Protein–RNA interactions for Protein: Q8CC84

Lysmd4, LysM and putative peptidoglycan-binding domain-containing protein 4, mousemouse

Predictions only

Length 293 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lysmd4Q8CC84 Gm45504-201ENSMUST00000211407 2107 ntBASIC13.95□□□□□ -0.18
Lysmd4Q8CC84 Nudt21-204ENSMUST00000212981 1184 ntTSL 3 BASIC13.95□□□□□ -0.18
Lysmd4Q8CC84 Mrpl21-201ENSMUST00000025743 802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lysmd4Q8CC84 Nnat-201ENSMUST00000088484 458 ntTSL 2 BASIC13.95□□□□□ -0.18
Lysmd4Q8CC84 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lysmd4Q8CC84 Polr3gl-201ENSMUST00000091924 1427 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lysmd4Q8CC84 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.95□□□□□ -0.18
Lysmd4Q8CC84 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lysmd4Q8CC84 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lysmd4Q8CC84 Ubash3b-201ENSMUST00000044155 6354 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lysmd4Q8CC84 Snph-204ENSMUST00000109877 3367 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lysmd4Q8CC84 Acbd5-206ENSMUST00000155602 1714 ntAPPRIS ALT2 TSL 2 BASIC13.95□□□□□ -0.18
Lysmd4Q8CC84 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lysmd4Q8CC84 Gm44443-201ENSMUST00000204396 5633 ntBASIC13.95□□□□□ -0.18
Lysmd4Q8CC84 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC13.95□□□□□ -0.18
Lysmd4Q8CC84 Anks1-201ENSMUST00000025058 6844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lysmd4Q8CC84 Cr1l-208ENSMUST00000194111 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Lysmd4Q8CC84 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC13.95□□□□□ -0.18
Lysmd4Q8CC84 Sh2b3-204ENSMUST00000122426 2777 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lysmd4Q8CC84 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lysmd4Q8CC84 Cep55-203ENSMUST00000169673 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lysmd4Q8CC84 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Lysmd4Q8CC84 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lysmd4Q8CC84 Med25-210ENSMUST00000208253 3693 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lysmd4Q8CC84 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lysmd4Q8CC84 Senp1-204ENSMUST00000180657 3806 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lysmd4Q8CC84 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lysmd4Q8CC84 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lysmd4Q8CC84 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lysmd4Q8CC84 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lysmd4Q8CC84 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Lysmd4Q8CC84 1810062O18Rik-202ENSMUST00000128848 745 ntTSL 3 BASIC13.94□□□□□ -0.18
Lysmd4Q8CC84 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lysmd4Q8CC84 Utp23-204ENSMUST00000161651 582 ntTSL 5 BASIC13.94□□□□□ -0.18
Lysmd4Q8CC84 Apopt1-204ENSMUST00000163220 671 ntAPPRIS ALT2 TSL 2 BASIC13.94□□□□□ -0.18
Lysmd4Q8CC84 Ndufab1-ps-201ENSMUST00000166096 468 ntBASIC13.94□□□□□ -0.18
Lysmd4Q8CC84 Aqp5-202ENSMUST00000169082 1551 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lysmd4Q8CC84 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Lysmd4Q8CC84 4930544I03Rik-201ENSMUST00000181184 1276 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Lysmd4Q8CC84 Gm45058-201ENSMUST00000205810 766 ntBASIC13.94□□□□□ -0.18
Lysmd4Q8CC84 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lysmd4Q8CC84 AC114585.2-202ENSMUST00000228094 426 ntBASIC13.94□□□□□ -0.18
Lysmd4Q8CC84 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lysmd4Q8CC84 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lysmd4Q8CC84 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lysmd4Q8CC84 Kif17-201ENSMUST00000030539 3453 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lysmd4Q8CC84 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Lysmd4Q8CC84 Fen1-204ENSMUST00000156291 2373 ntAPPRIS P1 TSL 2 BASIC13.94□□□□□ -0.18
Lysmd4Q8CC84 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Lysmd4Q8CC84 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.94□□□□□ -0.18
Lysmd4Q8CC84 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lysmd4Q8CC84 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Lysmd4Q8CC84 Ccdc88b-201ENSMUST00000113440 4959 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lysmd4Q8CC84 Iqcb1-201ENSMUST00000023535 2257 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lysmd4Q8CC84 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lysmd4Q8CC84 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lysmd4Q8CC84 Oas1b-203ENSMUST00000183291 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lysmd4Q8CC84 A430034D21Rik-201ENSMUST00000194339 1802 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Lysmd4Q8CC84 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lysmd4Q8CC84 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lysmd4Q8CC84 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lysmd4Q8CC84 Lman1-202ENSMUST00000120461 2208 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lysmd4Q8CC84 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lysmd4Q8CC84 Rps5-202ENSMUST00000108539 794 ntAPPRIS P1 TSL 2 BASIC13.93□□□□□ -0.18
Lysmd4Q8CC84 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Lysmd4Q8CC84 Fgf8-202ENSMUST00000026241 1168 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Lysmd4Q8CC84 Odf1-201ENSMUST00000081966 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lysmd4Q8CC84 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lysmd4Q8CC84 Hdhd2-203ENSMUST00000097522 2318 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lysmd4Q8CC84 Igfbp1-201ENSMUST00000020704 1525 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lysmd4Q8CC84 Layn-204ENSMUST00000217212 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lysmd4Q8CC84 Alx1-204ENSMUST00000217946 1542 ntTSL 5 BASIC13.93□□□□□ -0.18
Lysmd4Q8CC84 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Lysmd4Q8CC84 0610005C13Rik-207ENSMUST00000210866 2434 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Lysmd4Q8CC84 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lysmd4Q8CC84 Anks1b-214ENSMUST00000182356 7561 ntTSL 5 BASIC13.93□□□□□ -0.18
Lysmd4Q8CC84 Tpgs2-202ENSMUST00000148255 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lysmd4Q8CC84 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Lysmd4Q8CC84 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lysmd4Q8CC84 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC13.93□□□□□ -0.18
Lysmd4Q8CC84 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Lysmd4Q8CC84 Sybu-209ENSMUST00000228639 4113 ntBASIC13.92□□□□□ -0.18
Lysmd4Q8CC84 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lysmd4Q8CC84 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lysmd4Q8CC84 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lysmd4Q8CC84 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lysmd4Q8CC84 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lysmd4Q8CC84 Zfp36l2-201ENSMUST00000060366 3530 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lysmd4Q8CC84 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lysmd4Q8CC84 Cdx2-201ENSMUST00000031650 2261 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lysmd4Q8CC84 Ttc24-201ENSMUST00000050258 2251 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lysmd4Q8CC84 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Lysmd4Q8CC84 Mib1-201ENSMUST00000052838 10231 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lysmd4Q8CC84 Rassf7-201ENSMUST00000046890 1525 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Lysmd4Q8CC84 Gm12134-201ENSMUST00000122109 520 ntBASIC13.92□□□□□ -0.18
Lysmd4Q8CC84 Gm19610-201ENSMUST00000202894 408 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Lysmd4Q8CC84 Gm43791-201ENSMUST00000202914 468 ntTSL 5 BASIC13.92□□□□□ -0.18
Lysmd4Q8CC84 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC13.92□□□□□ -0.18
Lysmd4Q8CC84 Gm30437-201ENSMUST00000206086 1201 ntBASIC13.92□□□□□ -0.18
Lysmd4Q8CC84 Ttc32-203ENSMUST00000219488 768 ntTSL 3 BASIC13.92□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 38.3 ms