Protein–RNA interactions for Protein: Q6P9A3

ZNF549, Zinc finger protein 549, humanhuman

Predictions only

Length 640 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF549Q6P9A3 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC18.28■□□□□ 0.52
ZNF549Q6P9A3 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.28■□□□□ 0.52
ZNF549Q6P9A3 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC18.28■□□□□ 0.52
ZNF549Q6P9A3 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZNF549Q6P9A3 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC18.28■□□□□ 0.52
ZNF549Q6P9A3 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZNF549Q6P9A3 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZNF549Q6P9A3 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
ZNF549Q6P9A3 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC18.28■□□□□ 0.52
ZNF549Q6P9A3 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
ZNF549Q6P9A3 UQCRQ-201ENST00000378665 586 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZNF549Q6P9A3 KRT18P23-201ENST00000435622 1283 ntBASIC18.28■□□□□ 0.52
ZNF549Q6P9A3 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC18.28■□□□□ 0.52
ZNF549Q6P9A3 LY6E-211ENST00000521699 1256 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
ZNF549Q6P9A3 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.28■□□□□ 0.52
ZNF549Q6P9A3 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC18.28■□□□□ 0.52
ZNF549Q6P9A3 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ZNF549Q6P9A3 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZNF549Q6P9A3 UROS-202ENST00000368778 1556 ntTSL 2 BASIC18.28■□□□□ 0.52
ZNF549Q6P9A3 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC18.28■□□□□ 0.52
ZNF549Q6P9A3 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC18.28■□□□□ 0.52
ZNF549Q6P9A3 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZNF549Q6P9A3 AL133373.2-201ENST00000623187 2828 ntBASIC18.28■□□□□ 0.52
ZNF549Q6P9A3 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
ZNF549Q6P9A3 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZNF549Q6P9A3 SDHAP2-201ENST00000455183 2001 ntBASIC18.28■□□□□ 0.52
ZNF549Q6P9A3 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC18.28■□□□□ 0.52
ZNF549Q6P9A3 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZNF549Q6P9A3 TDRKH-207ENST00000458431 2768 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZNF549Q6P9A3 AL163051.1-201ENST00000569214 1512 ntBASIC18.28■□□□□ 0.52
ZNF549Q6P9A3 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
ZNF549Q6P9A3 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC18.28■□□□□ 0.52
ZNF549Q6P9A3 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC18.28■□□□□ 0.52
ZNF549Q6P9A3 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
ZNF549Q6P9A3 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ZNF549Q6P9A3 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC18.27■□□□□ 0.52
ZNF549Q6P9A3 PEX16-202ENST00000378750 1335 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ZNF549Q6P9A3 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ZNF549Q6P9A3 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC18.27■□□□□ 0.52
ZNF549Q6P9A3 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC18.27■□□□□ 0.52
ZNF549Q6P9A3 SLC25A43-201ENST00000217909 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ZNF549Q6P9A3 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ZNF549Q6P9A3 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.27■□□□□ 0.52
ZNF549Q6P9A3 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC18.27■□□□□ 0.52
ZNF549Q6P9A3 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.27■□□□□ 0.52
ZNF549Q6P9A3 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ZNF549Q6P9A3 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ZNF549Q6P9A3 PHB2-202ENST00000440277 996 ntTSL 5 BASIC18.27■□□□□ 0.52
ZNF549Q6P9A3 GXYLT1P6-201ENST00000456472 1187 ntBASIC18.27■□□□□ 0.52
ZNF549Q6P9A3 NAPSB-206ENST00000562112 1266 ntBASIC18.27■□□□□ 0.52
ZNF549Q6P9A3 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ZNF549Q6P9A3 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ZNF549Q6P9A3 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
ZNF549Q6P9A3 FAM87A-204ENST00000613235 858 ntBASIC18.27■□□□□ 0.52
ZNF549Q6P9A3 ATG4B-226ENST00000625810 370 ntTSL 4 BASIC18.27■□□□□ 0.52
ZNF549Q6P9A3 CD19-202ENST00000538922 1957 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
ZNF549Q6P9A3 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ZNF549Q6P9A3 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ZNF549Q6P9A3 MED9-201ENST00000268711 2228 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
ZNF549Q6P9A3 TOR2A-205ENST00000463577 2211 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
ZNF549Q6P9A3 AC140125.2-201ENST00000502515 1517 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
ZNF549Q6P9A3 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
ZNF549Q6P9A3 TTLL9-205ENST00000375938 2623 ntAPPRIS P2 TSL 2 BASIC18.27■□□□□ 0.51
ZNF549Q6P9A3 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
ZNF549Q6P9A3 LINC00535-201ENST00000501400 1914 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
ZNF549Q6P9A3 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.51
ZNF549Q6P9A3 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
ZNF549Q6P9A3 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF549Q6P9A3 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC18.26■□□□□ 0.51
ZNF549Q6P9A3 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.26■□□□□ 0.51
ZNF549Q6P9A3 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC18.26■□□□□ 0.51
ZNF549Q6P9A3 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF549Q6P9A3 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF549Q6P9A3 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF549Q6P9A3 DENND2A-201ENST00000275884 3735 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF549Q6P9A3 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF549Q6P9A3 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF549Q6P9A3 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC18.26■□□□□ 0.51
ZNF549Q6P9A3 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC18.26■□□□□ 0.51
ZNF549Q6P9A3 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF549Q6P9A3 ECEL1P2-202ENST00000465689 757 ntBASIC18.26■□□□□ 0.51
ZNF549Q6P9A3 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF549Q6P9A3 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF549Q6P9A3 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC18.26■□□□□ 0.51
ZNF549Q6P9A3 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC18.26■□□□□ 0.51
ZNF549Q6P9A3 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC18.26■□□□□ 0.51
ZNF549Q6P9A3 AC004448.5-201ENST00000579897 567 ntTSL 5 BASIC18.26■□□□□ 0.51
ZNF549Q6P9A3 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF549Q6P9A3 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF549Q6P9A3 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC18.26■□□□□ 0.51
ZNF549Q6P9A3 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF549Q6P9A3 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF549Q6P9A3 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF549Q6P9A3 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
ZNF549Q6P9A3 POR-209ENST00000439269 1858 ntTSL 2 BASIC18.26■□□□□ 0.51
ZNF549Q6P9A3 IRAK3-202ENST00000457197 1853 ntTSL 2 BASIC18.26■□□□□ 0.51
ZNF549Q6P9A3 FLYWCH1P1-201ENST00000460917 1874 ntBASIC18.26■□□□□ 0.51
ZNF549Q6P9A3 SCAND1-203ENST00000615116 1371 ntAPPRIS P1 TSL 5 BASIC18.26■□□□□ 0.51
ZNF549Q6P9A3 PCED1A-201ENST00000356872 1706 ntTSL 2 BASIC18.26■□□□□ 0.51
ZNF549Q6P9A3 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 50.6 ms