Protein–RNA interactions for Protein: P62068

USP46, Ubiquitin carboxyl-terminal hydrolase 46, humanhuman

Predictions only

Length 366 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP46P62068 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
USP46P62068 DCAF4-201ENST00000353777 1940 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
USP46P62068 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
USP46P62068 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
USP46P62068 ATP5G2P1-201ENST00000433580 426 ntBASIC19.34■□□□□ 0.69
USP46P62068 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
USP46P62068 PLXND1-205ENST00000504689 546 ntTSL 3 BASIC19.34■□□□□ 0.69
USP46P62068 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC19.34■□□□□ 0.69
USP46P62068 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC19.34■□□□□ 0.69
USP46P62068 Metazoa_SRP.33-201ENST00000613468 285 ntBASIC19.34■□□□□ 0.69
USP46P62068 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
USP46P62068 RAI14-201ENST00000265109 5092 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
USP46P62068 LURAP1-201ENST00000371980 1854 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
USP46P62068 EI24-201ENST00000278903 2455 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
USP46P62068 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC19.34■□□□□ 0.69
USP46P62068 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC19.34■□□□□ 0.69
USP46P62068 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
USP46P62068 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
USP46P62068 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC19.34■□□□□ 0.69
USP46P62068 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
USP46P62068 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.33■□□□□ 0.69
USP46P62068 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
USP46P62068 FAM228B-210ENST00000615575 1357 ntAPPRIS P3 TSL 5 BASIC19.33■□□□□ 0.69
USP46P62068 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
USP46P62068 AMACR-205ENST00000426255 1316 ntTSL 2 BASIC19.33■□□□□ 0.69
USP46P62068 MARK2-209ENST00000509502 2862 ntAPPRIS ALT2 TSL 2 BASIC19.33■□□□□ 0.69
USP46P62068 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
USP46P62068 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
USP46P62068 AURKAIP1-202ENST00000338338 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
USP46P62068 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
USP46P62068 AP000593.1-201ENST00000393668 712 ntBASIC19.33■□□□□ 0.68
USP46P62068 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.68
USP46P62068 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC19.33■□□□□ 0.68
USP46P62068 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC19.33■□□□□ 0.68
USP46P62068 AC092119.3-201ENST00000612618 583 ntBASIC19.33■□□□□ 0.68
USP46P62068 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC19.33■□□□□ 0.68
USP46P62068 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
USP46P62068 ASCL5-202ENST00000458416 1420 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
USP46P62068 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
USP46P62068 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC19.32■□□□□ 0.68
USP46P62068 UROS-202ENST00000368778 1556 ntTSL 2 BASIC19.32■□□□□ 0.68
USP46P62068 CPAMD8-202ENST00000388925 5355 ntTSL 5 BASIC19.32■□□□□ 0.68
USP46P62068 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
USP46P62068 NFIB-208ENST00000397581 3318 ntTSL 5 BASIC19.32■□□□□ 0.68
USP46P62068 AGER-205ENST00000375069 1538 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
USP46P62068 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC19.32■□□□□ 0.68
USP46P62068 RABAC1-201ENST00000222008 821 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
USP46P62068 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
USP46P62068 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
USP46P62068 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.32■□□□□ 0.68
USP46P62068 AP002383.4-201ENST00000442518 975 ntBASIC19.32■□□□□ 0.68
USP46P62068 TSSC2-201ENST00000450217 709 ntBASIC19.32■□□□□ 0.68
USP46P62068 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
USP46P62068 LY6E-209ENST00000521003 740 ntAPPRIS P2 TSL 2 BASIC19.32■□□□□ 0.68
USP46P62068 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
USP46P62068 TK1-205ENST00000590862 642 ntTSL 3 BASIC19.32■□□□□ 0.68
USP46P62068 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
USP46P62068 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC19.32■□□□□ 0.68
USP46P62068 KLHL29-203ENST00000486442 5287 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
USP46P62068 AC008393.1-201ENST00000499601 1454 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
USP46P62068 ACD-215ENST00000620761 1483 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
USP46P62068 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
USP46P62068 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.32■□□□□ 0.68
USP46P62068 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
USP46P62068 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
USP46P62068 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.32■□□□□ 0.68
USP46P62068 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
USP46P62068 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC19.32■□□□□ 0.68
USP46P62068 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
USP46P62068 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
USP46P62068 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC19.31■□□□□ 0.68
USP46P62068 P2RY6-201ENST00000349767 1700 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
USP46P62068 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
USP46P62068 ZNF787-202ENST00000587279 1657 ntTSL 2 BASIC19.31■□□□□ 0.68
USP46P62068 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.31■□□□□ 0.68
USP46P62068 ISCU-201ENST00000311893 994 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
USP46P62068 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
USP46P62068 TNNI3-201ENST00000344887 840 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
USP46P62068 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
USP46P62068 TSPY22P-201ENST00000427496 604 ntBASIC19.31■□□□□ 0.68
USP46P62068 SSR4P1-202ENST00000429427 967 ntTSL 5 BASIC19.31■□□□□ 0.68
USP46P62068 PTX4-202ENST00000440447 1117 ntTSL 5 BASIC19.31■□□□□ 0.68
USP46P62068 MHENCR-202ENST00000449500 801 ntTSL 2 BASIC19.31■□□□□ 0.68
USP46P62068 BX276092.5-203ENST00000456199 560 ntBASIC19.31■□□□□ 0.68
USP46P62068 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC19.31■□□□□ 0.68
USP46P62068 NAPSB-203ENST00000531692 561 ntTSL 2 BASIC19.31■□□□□ 0.68
USP46P62068 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC19.31■□□□□ 0.68
USP46P62068 AL121672.3-201ENST00000608644 468 ntBASIC19.31■□□□□ 0.68
USP46P62068 Z83836.1-201ENST00000624605 1642 ntBASIC19.31■□□□□ 0.68
USP46P62068 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
USP46P62068 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
USP46P62068 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
USP46P62068 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
USP46P62068 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC19.31■□□□□ 0.68
USP46P62068 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
USP46P62068 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
USP46P62068 POU3F2-201ENST00000328345 4879 ntAPPRIS P1 BASIC19.3■□□□□ 0.68
USP46P62068 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.3■□□□□ 0.68
USP46P62068 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
USP46P62068 UBC-206ENST00000538617 1303 ntTSL 5 BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms