Protein–RNA interactions for Protein: P41778

Pbx1, Pre-B-cell leukemia transcription factor 1, mousemouse

Predictions only

Length 430 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pbx1P41778 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC16.73■□□□□ 0.27
Pbx1P41778 Tmem40-202ENSMUST00000112946 1554 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pbx1P41778 Simc1-202ENSMUST00000121401 4819 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Pbx1P41778 Lmntd2-202ENSMUST00000170841 2077 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pbx1P41778 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Pbx1P41778 Irs3-201ENSMUST00000057314 2337 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pbx1P41778 Trmt6-201ENSMUST00000039554 2828 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pbx1P41778 Otop3-201ENSMUST00000019006 2422 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
Pbx1P41778 Chd3os-202ENSMUST00000151617 389 ntTSL 3 BASIC16.73■□□□□ 0.27
Pbx1P41778 Gm45091-201ENSMUST00000205799 504 ntTSL 3 BASIC16.73■□□□□ 0.27
Pbx1P41778 Gm26709-203ENSMUST00000223260 715 ntTSL 5 BASIC16.73■□□□□ 0.27
Pbx1P41778 Rhebl1-201ENSMUST00000024518 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pbx1P41778 Il17a-201ENSMUST00000027061 1171 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pbx1P41778 Mrps33-201ENSMUST00000031978 1107 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pbx1P41778 Ifi27l2a-201ENSMUST00000055071 463 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pbx1P41778 Selenov-201ENSMUST00000056589 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pbx1P41778 C1qbp-201ENSMUST00000078528 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pbx1P41778 Fthl17f-201ENSMUST00000097029 847 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
Pbx1P41778 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pbx1P41778 Sybu-203ENSMUST00000110269 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pbx1P41778 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
Pbx1P41778 Pqlc2-201ENSMUST00000053862 1532 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pbx1P41778 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC16.73■□□□□ 0.27
Pbx1P41778 Gm29340-201ENSMUST00000188763 3854 ntBASIC16.73■□□□□ 0.27
Pbx1P41778 Nhs-201ENSMUST00000081569 4881 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pbx1P41778 Nuak1-201ENSMUST00000020220 5558 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pbx1P41778 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pbx1P41778 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
Pbx1P41778 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
Pbx1P41778 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pbx1P41778 Olfr317-202ENSMUST00000215513 2769 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Pbx1P41778 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pbx1P41778 Irf3-201ENSMUST00000003284 2031 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pbx1P41778 Kdm5b-203ENSMUST00000112198 5413 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pbx1P41778 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pbx1P41778 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pbx1P41778 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pbx1P41778 Col17a1-202ENSMUST00000086923 5477 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pbx1P41778 Dnajc7-201ENSMUST00000014339 2330 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pbx1P41778 Rprl3-201ENSMUST00000157400 290 ntBASIC16.72■□□□□ 0.27
Pbx1P41778 Gm19164-201ENSMUST00000210667 640 ntBASIC16.72■□□□□ 0.27
Pbx1P41778 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC16.72■□□□□ 0.27
Pbx1P41778 Mrpl28-201ENSMUST00000025014 1048 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pbx1P41778 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pbx1P41778 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pbx1P41778 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pbx1P41778 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC16.72■□□□□ 0.27
Pbx1P41778 Hcfc2-201ENSMUST00000020478 3422 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
Pbx1P41778 Fam109b-201ENSMUST00000050349 2745 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pbx1P41778 Spsb3-201ENSMUST00000024976 1947 ntAPPRIS P3 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pbx1P41778 Lipo3-202ENSMUST00000112508 2839 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pbx1P41778 Tlr2-201ENSMUST00000029623 3014 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Pbx1P41778 Sec24a-202ENSMUST00000064297 2104 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pbx1P41778 Cpsf6-206ENSMUST00000176670 2227 ntTSL 5 BASIC16.72■□□□□ 0.27
Pbx1P41778 Cpsf6-207ENSMUST00000176686 2200 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
Pbx1P41778 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pbx1P41778 Sigirr-206ENSMUST00000210167 1897 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pbx1P41778 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC16.71■□□□□ 0.27
Pbx1P41778 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pbx1P41778 Pqlc2-205ENSMUST00000172747 1405 ntAPPRIS P2 TSL 5 BASIC16.71■□□□□ 0.27
Pbx1P41778 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC16.71■□□□□ 0.27
Pbx1P41778 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC16.71■□□□□ 0.27
Pbx1P41778 Hsd3b7-202ENSMUST00000106271 1713 ntTSL 5 BASIC16.71■□□□□ 0.27
Pbx1P41778 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pbx1P41778 Capn1-201ENSMUST00000025891 3100 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pbx1P41778 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC16.71■□□□□ 0.27
Pbx1P41778 Tmtc4-201ENSMUST00000037726 3416 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pbx1P41778 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pbx1P41778 Gm25016-201ENSMUST00000158399 131 ntBASIC16.71■□□□□ 0.27
Pbx1P41778 Tppp3-202ENSMUST00000176419 719 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pbx1P41778 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pbx1P41778 A930016O22Rik-201ENSMUST00000047020 1214 ntTSL 2 BASIC16.71■□□□□ 0.27
Pbx1P41778 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pbx1P41778 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC16.71■□□□□ 0.27
Pbx1P41778 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Pbx1P41778 Vcan-205ENSMUST00000159337 2273 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Pbx1P41778 Kdm8-201ENSMUST00000033010 2389 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Pbx1P41778 Usp43-202ENSMUST00000108677 4447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Pbx1P41778 Tpm1-209ENSMUST00000113690 2890 ntTSL 3 BASIC16.71■□□□□ 0.26
Pbx1P41778 Sept4-201ENSMUST00000018544 1726 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pbx1P41778 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pbx1P41778 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pbx1P41778 Ppp1r18-204ENSMUST00000144382 2536 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pbx1P41778 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pbx1P41778 Chuk-201ENSMUST00000026217 3502 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pbx1P41778 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pbx1P41778 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pbx1P41778 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Pbx1P41778 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC16.7■□□□□ 0.26
Pbx1P41778 Gm45760-201ENSMUST00000212190 1782 ntBASIC16.7■□□□□ 0.26
Pbx1P41778 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pbx1P41778 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pbx1P41778 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pbx1P41778 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC16.7■□□□□ 0.26
Pbx1P41778 Majin-202ENSMUST00000113528 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pbx1P41778 Gm16183-201ENSMUST00000127527 1193 ntTSL 5 BASIC16.7■□□□□ 0.26
Pbx1P41778 Ccl27a-219ENSMUST00000173865 657 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Pbx1P41778 Sbsn-202ENSMUST00000182227 432 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Pbx1P41778 Sbsn-203ENSMUST00000182229 732 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Pbx1P41778 Gm7556-201ENSMUST00000201178 1084 ntBASIC16.7■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms